AT1G01010
NAC Family

NAC domain-containing protein 69-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
N/A
Physical Location & Seq
Forward (+)
3631 .. 5899
2269 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G01010.1

Sequence Viewer

Length: 1290 bp
ATGGAGGATCAAGTTGGGTTTGGGTTCCGTCCGAACGACGAGGAGCTCGTTGGTCACTATCTCCGTAACAAAATCGAAGGAAACACTAGCCGCGACGTTGAAGTAGCCATCAGCGAGGTCAACATCTGTAGCTACGATCCTTGGAACTTGCGCTTCCAGTCAAAGTACAAATCGAGAGATGCTATGTGGTACTTCTTCTCTCGTAGAGAAAACAACAAAGGGAATCGACAGAGCAGGACAACGGTTTCTGGTAAATGGAAGCTTACCGGAGAATCTGTTGAGGTCAAGGACCAGTGGGGATTTTGTAGTGAGGGCTTTCGTGGTAAGATTGGTCATAAAAGGGTTTTGGTGTTCCTCGATGGAAGATACCCTGACAAAACCAAATCTGATTGGGTTATCCACGAGTTCCACTACGACCTCTTACCAGAACATCAGAGGACATATGTCATCTGCAGACTTGAGTACAAGGGTGATGATGCGGACATTCTATCTGCTTATGCAATAGATCCCACTCCCGCTTTTGTCCCCAATATGACTAGTAGTGCAGGTTCTGTGGTCAACCAATCACGTCAACGAAATTCAGGATCTTACAACACTTACTCTGAGTATGATTCAGCAAATCATGGCCAGCAGTTTAATGAAAACTCTAACATTATGCAGCAGCAACCACTTCAAGGATCATTCAACCCTCTCCTTGAGTATGATTTTGCAAATCACGGCGGTCAGTGGCTGAGTGACTATATCGACCTGCAACAGCAAGTTCCTTACTTGGCACCTTATGAAAATGAGTCGGAGATGATTTGGAAGCATGTGATTGAAGAAAATTTTGAGTTTTTGGTAGATGAAAGGACATCTATGCAACAGCATTACAGTGATCACCGGCCCAAAAAACCTGTGTCTGGGGTTTTGCCTGATGATAGCAGTGATACTGAAACTGGATCAATGATTTTCGAAGACACTTCGAGCTCCACTGATAGTGTTGGTAGTTCAGATGAACCGGGCCATACTCGTATAGATGATATTCCATCATTGAACATTATTGAGCCTTTGCACAATTATAAGGCACAAGAGCAACCAAAGCAGCAGAGCAAAGAAAAGGTGATAAGTTCGCAGAAAAGCGAATGCGAGTGGAAAATGGCTGAAGACTCGATCAAGATACCTCCATCCACCAACACGGTGAAGCAGAGCTGGATTGTTTTGGAGAATGCACAGTGGAACTATCTCAAGAACATGATCATTGGTGTCTTGTTGTTCATCTCCGTCATTAGTTGGATCATTCTTGTTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

429

Amino Acids

49.43

Weight (kDa)

5.1

Isoelectric Point (pI)

55.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 5 - 137 7.4e-33 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1059
Acc36I ACCTGC 2 cut(s) 536, 756
AccB1I GGYRCC 1 cut(s) 772
AccII CGCG 1 cut(s) 93
AciI CCGC 4 cut(s) 91, 479, 516, 720
AclWI GGATC 7 cut(s) 15, 131, 500, 592, 685, 946, 1280
AcoI YGGCCR 1 cut(s) 625
AcsI RAATTY 2 cut(s) 577, 823
AcuI CTGAAG 1 cut(s) 1161
AfaI GTAC 3 cut(s) 167, 191, 464
AfiI CCNNNNNNNGG 2 cut(s) 674, 899
AgsI TTSAA 5 cut(s) 101, 674, 685, 818, 1033
AhlI ACTAGT 1 cut(s) 536
AjiI CACGTC 1 cut(s) 569
AluBI AGCT 5 cut(s) 46, 132, 262, 966, 1188
AluI AGCT 5 cut(s) 46, 132, 262, 966, 1188
Alw21I GWGCWC 2 cut(s) 48, 968
AlwI GGATC 7 cut(s) 15, 131, 500, 592, 685, 946, 1280
AlwNI CAGNNNCTG 2 cut(s) 551, 730
AoxI GGCC 3 cut(s) 625, 881, 1000
ApeKI GCWGC 3 cut(s) 658, 661, 1081
ApoI RAATTY 2 cut(s) 577, 823
AspLEI GCGC 1 cut(s) 153
AspS9I GGNCC 3 cut(s) 289, 882, 1000
AsuC2I CCSGG 1 cut(s) 999
AsuHPI GGTGA 4 cut(s) 482, 869, 1111, 1189
AsuII TTCGAA 1 cut(s) 951
AvaII GGWCC 1 cut(s) 289
BalI TGGCCA 1 cut(s) 627
BanI GGYRCC 1 cut(s) 772
BanII GRGCYC 2 cut(s) 48, 968
BauI CACGAG 1 cut(s) 401
BbsI GAAGAC 2 cut(s) 960, 1149
Bbv12I GWGCWC 2 cut(s) 48, 968
BbvI GCAGC 3 cut(s) 670, 673, 1093
BccI CCATC 4 cut(s) 116, 353, 1033, 1171
BceAI ACGGC 1 cut(s) 733
BclI TGATCA 2 cut(s) 874, 1233
BcnI CCSGG 1 cut(s) 999
BcuI ACTAGT 1 cut(s) 536
BfaI CTAG 2 cut(s) 87, 537
BfmI CTRYAG 2 cut(s) 127, 451
BfuAI ACCTGC 2 cut(s) 536, 756
BisI GCNGC 4 cut(s) 91, 659, 662, 1082
BlsI GCNGC 4 cut(s) 92, 660, 663, 1083
Bme1390I CCNGG 1 cut(s) 999
Bme18I GGWCC 1 cut(s) 289
BmgBI CACGTC 1 cut(s) 569
BmgT120I GGNCC 3 cut(s) 289, 882, 1000
BmiI GGNNCC 2 cut(s) 26, 774
BmrFI CCNGG 1 cut(s) 999
BmsI GCATC 2 cut(s) 169, 466
BoxI GACNNNNGTC 1 cut(s) 443
BpiI GAAGAC 2 cut(s) 960, 1149
Bpu14I TTCGAA 1 cut(s) 951
BpuEI CTTGAG 3 cut(s) 479, 716, 1208
BpuMI CCSGG 1 cut(s) 999
BsaJI CCNNGG 1 cut(s) 140
BsaWI WCCGGW 1 cut(s) 266
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
Bsc4I CCNNNNNNNGG 2 cut(s) 674, 899
Bse118I RCCGGY 1 cut(s) 879
Bse1I ACTGG 3 cut(s) 157, 292, 940
BseDI CCNNGG 1 cut(s) 140
BseGI GGATG 1 cut(s) 1163
BseLI CCNNNNNNNGG 2 cut(s) 674, 899
BseMII CTCAG 2 cut(s) 594, 722
BseNI ACTGG 3 cut(s) 157, 292, 940
BseRI GAGGAG 1 cut(s) 56
BseXI GCAGC 3 cut(s) 670, 673, 1093
BsgI GTGCAG 1 cut(s) 564
Bsh1236I CGCG 1 cut(s) 93
BshFI GGCC 3 cut(s) 627, 883, 1002
BshNI GGYRCC 1 cut(s) 772
BsiHKAI GWGCWC 2 cut(s) 48, 968
BsiSI CCGG 3 cut(s) 267, 880, 998
BslFI GGGAC 1 cut(s) 509
BslI CCNNNNNNNGG 2 cut(s) 674, 899
BsmFI GGGAC 1 cut(s) 509
BsmI GAATGC 2 cut(s) 1127, 1210
BsnI GGCC 3 cut(s) 627, 883, 1002
Bsp119I TTCGAA 1 cut(s) 951
Bsp1286I GDGCHC 2 cut(s) 48, 968
BspACI CCGC 4 cut(s) 91, 479, 516, 720
BspANI GGCC 3 cut(s) 627, 883, 1002
BspCNI CTCAG 2 cut(s) 595, 723
BspFNI CGCG 1 cut(s) 93
BspLI GGNNCC 2 cut(s) 26, 774
BspMAI CTGCAG 1 cut(s) 455
BspMI ACCTGC 2 cut(s) 536, 756
BspPI GGATC 7 cut(s) 15, 131, 500, 592, 685, 946, 1280
BspT104I TTCGAA 1 cut(s) 951
BspT107I GGYRCC 1 cut(s) 772
BsrFI RCCGGY 1 cut(s) 879
BsrI ACTGG 3 cut(s) 157, 292, 940
BssAI RCCGGY 1 cut(s) 879
BssECI CCNNGG 1 cut(s) 140
BssSI CACGAG 1 cut(s) 401
BssT1I CCWWGG 1 cut(s) 140
Bst2BI CACGAG 1 cut(s) 401
Bst4CI ACNGT 4 cut(s) 244, 872, 1177, 1212
BstBI TTCGAA 1 cut(s) 951
BstC8I GCNNGC 1 cut(s) 629
BstDEI CTNAG 2 cut(s) 603, 731
BstF5I GGATG 1 cut(s) 1163
BstFNI CGCG 1 cut(s) 93
BstHHI GCGC 1 cut(s) 153
BstMWI GCNNNNNNNGC 1 cut(s) 1078
BstNSI RCATGY 1 cut(s) 812
BstPAI GACNNNNGTC 1 cut(s) 443
BstSCI CCNGG 1 cut(s) 997
BstSFI CTRYAG 2 cut(s) 127, 451
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 3 cut(s) 670, 673, 1093
BstV2I GAAGAC 2 cut(s) 960, 1149
BstX2I RGATCY 2 cut(s) 505, 584
BstYI RGATCY 2 cut(s) 505, 584
BsuRI GGCC 3 cut(s) 627, 883, 1002
BtrI CACGTC 1 cut(s) 569
BtsCI GGATG 1 cut(s) 1163
BtsI GCAGTG 1 cut(s) 928
BtsIMutI CAGTG 6 cut(s) 299, 731, 877, 928, 969, 1217
BveI ACCTGC 2 cut(s) 536, 756
Cac8I GCNNGC 1 cut(s) 629
CaiI CAGNNNCTG 2 cut(s) 551, 730
CfoI GCGC 1 cut(s) 153
Cfr10I RCCGGY 1 cut(s) 879
Cfr13I GGNCC 3 cut(s) 289, 882, 1000
Csp6I GTAC 3 cut(s) 166, 190, 463
CviAII CATG 3 cut(s) 623, 809, 1231
CviQI GTAC 3 cut(s) 166, 190, 463
DdeI CTNAG 2 cut(s) 603, 731
EaeI YGGCCR 1 cut(s) 625
Ecl136II GAGCTC 2 cut(s) 46, 966
Eco130I CCWWGG 1 cut(s) 140
Eco24I GRGCYC 2 cut(s) 48, 968
Eco47I GGWCC 1 cut(s) 289
Eco53kI GAGCTC 2 cut(s) 46, 966
Eco57I CTGAAG 1 cut(s) 1161
EcoICRI GAGCTC 2 cut(s) 46, 966
EcoT14I CCWWGG 1 cut(s) 140
EcoT38I GRGCYC 2 cut(s) 48, 968
ErhI CCWWGG 1 cut(s) 140
FaeI CATG 3 cut(s) 626, 812, 1234
FaqI GGGAC 1 cut(s) 509
FatI CATG 3 cut(s) 622, 808, 1230
FauI CCCGC 1 cut(s) 523
FauNDI CATATG 1 cut(s) 442
FbaI TGATCA 2 cut(s) 874, 1233
Fnu4HI GCNGC 4 cut(s) 91, 659, 662, 1082
FokI GGATG 1 cut(s) 1150
FriOI GRGCYC 2 cut(s) 48, 968
Fsp4HI GCNGC 4 cut(s) 91, 659, 662, 1082
FspBI CTAG 2 cut(s) 87, 537
GlaI GCGC 1 cut(s) 152
GluI GCNGC 4 cut(s) 91, 659, 662, 1082
HaeIII GGCC 3 cut(s) 627, 883, 1002
HapII CCGG 3 cut(s) 267, 880, 998
HhaI GCGC 1 cut(s) 153
Hin1II CATG 3 cut(s) 626, 812, 1234
Hin6I GCGC 1 cut(s) 151
HinP1I GCGC 1 cut(s) 151
HincII GTYRAC 3 cut(s) 121, 559, 572
HindII GTYRAC 3 cut(s) 121, 559, 572
HindIII AAGCTT 1 cut(s) 260
HinfI GANTC 5 cut(s) 223, 272, 611, 788, 1145
HpaII CCGG 3 cut(s) 267, 880, 998
HphI GGTGA 4 cut(s) 482, 869, 1111, 1189
Hpy166II GTNNAC 3 cut(s) 121, 559, 572
Hpy188I TCNGA 6 cut(s) 33, 388, 435, 604, 793, 991
Hpy188III TCNNGA 4 cut(s) 174, 582, 1153, 1225
Hpy8I GTNNAC 3 cut(s) 121, 559, 572
Hpy99I CGWCG 2 cut(s) 41, 98
HpyAV CCTTC 1 cut(s) 71
HpyCH4III ACNGT 4 cut(s) 244, 872, 1177, 1212
HpyCH4IV ACGT 2 cut(s) 96, 568
HpyCH4V TGCA 9 cut(s) 453, 500, 545, 658, 710, 751, 859, 1051, 1208
HpyF10VI GCNNNNNNNGC 1 cut(s) 1078
HpyF3I CTNAG 2 cut(s) 603, 731
HpySE526I ACGT 2 cut(s) 96, 568
Hsp92II CATG 3 cut(s) 626, 812, 1234
HspAI GCGC 1 cut(s) 151
Ksp22I TGATCA 2 cut(s) 874, 1233
LmnI GCTCC 2 cut(s) 43, 971
Lsp1109I GCAGC 3 cut(s) 670, 673, 1093
LweI GCATC 2 cut(s) 169, 466
MaeI CTAG 2 cut(s) 87, 537
MaeII ACGT 2 cut(s) 96, 568
MaeIII GTNAC 3 cut(s) 53, 65, 734
MboII GAAGA 5 cut(s) 187, 375, 830, 965, 1154
MflI RGATCY 2 cut(s) 505, 584
MhlI GDGCHC 2 cut(s) 48, 968
MlsI TGGCCA 1 cut(s) 627
MluCI AATT 3 cut(s) 577, 823, 1054
MluNI TGGCCA 1 cut(s) 627
MlyI GAGTC 2 cut(s) 797, 1139
MmeI TCCRAC 2 cut(s) 771, 1250
MnlI CCTC 9 cut(s) 34, 109, 274, 304, 365, 428, 429, 699, 1170
Mox20I TGGCCA 1 cut(s) 627
MscI TGGCCA 1 cut(s) 627
MseI TTAA 2 cut(s) 636, 1288
MslI CAYNNNNRTG 1 cut(s) 870
Msp20I TGGCCA 1 cut(s) 627
MspI CCGG 3 cut(s) 267, 880, 998
MspR9I CCNGG 1 cut(s) 999
Mva1269I GAATGC 2 cut(s) 1127, 1210
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 1 cut(s) 1078
NciI CCSGG 1 cut(s) 999
NdeI CATATG 1 cut(s) 442
NlaIII CATG 3 cut(s) 626, 812, 1234
NlaIV GGNNCC 2 cut(s) 26, 774
NmuCI GTSAC 2 cut(s) 53, 734
NspI RCATGY 1 cut(s) 812
NspV TTCGAA 1 cut(s) 951
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 2 cut(s) 1127, 1210
PfeI GAWTC 3 cut(s) 223, 272, 611
PkrI GCNGC 4 cut(s) 92, 660, 663, 1083
PleI GAGTC 2 cut(s) 796, 1139
PpsI GAGTC 2 cut(s) 796, 1139
PshAI GACNNNNGTC 1 cut(s) 443
PsiI TTATAA 1 cut(s) 1059
Psp124BI GAGCTC 2 cut(s) 48, 968
PspN4I GGNNCC 2 cut(s) 26, 774
PspPI GGNCC 3 cut(s) 289, 882, 1000
PsrI GAACNNNNNNTAC 2 cut(s) 532, 564
PstI CTGCAG 1 cut(s) 455
PstNI CAGNNNCTG 2 cut(s) 551, 730
PsuI RGATCY 2 cut(s) 505, 584
RsaI GTAC 3 cut(s) 167, 191, 464
RsaNI GTAC 3 cut(s) 166, 190, 463
RseI CAYNNNNRTG 1 cut(s) 870
SacI GAGCTC 2 cut(s) 48, 968
SaqAI TTAA 2 cut(s) 636, 1288
SatI GCNGC 4 cut(s) 91, 659, 662, 1082
Sau96I GGNCC 3 cut(s) 289, 882, 1000
SchI GAGTC 2 cut(s) 797, 1139
ScrFI CCNGG 1 cut(s) 999
SduI GDGCHC 2 cut(s) 48, 968
SfaNI GCATC 2 cut(s) 169, 466
SfcI CTRYAG 2 cut(s) 127, 451
SfuI TTCGAA 1 cut(s) 951
SinI GGWCC 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 870
SmlI CTYRAG 3 cut(s) 458, 695, 1223
SmoI CTYRAG 3 cut(s) 458, 695, 1223
SpeI ACTAGT 1 cut(s) 536
Sse9I AATT 3 cut(s) 577, 823, 1054
SsiI CCGC 4 cut(s) 91, 479, 516, 720
SspMI CTAG 2 cut(s) 87, 537
SstI GAGCTC 2 cut(s) 48, 968
StyD4I CCNGG 1 cut(s) 997
StyI CCWWGG 1 cut(s) 140
TaaI ACNGT 4 cut(s) 244, 872, 1177, 1212
TaiI ACGT 2 cut(s) 99, 571
TaqI TCGA 8 cut(s) 75, 173, 226, 357, 744, 951, 962, 1148
TasI AATT 3 cut(s) 577, 823, 1054
TatI WGTACW 2 cut(s) 165, 462
TauI GCSGC 1 cut(s) 93
TfiI GAWTC 3 cut(s) 223, 272, 611
Tru1I TTAA 2 cut(s) 636, 1288
Tru9I TTAA 2 cut(s) 636, 1288
TscAI CASTG 6 cut(s) 299, 731, 877, 928, 976, 1217
TseFI GTSAC 2 cut(s) 53, 734
TseI GCWGC 3 cut(s) 658, 661, 1081
Tsp45I GTSAC 2 cut(s) 53, 734
TspDTI ATGAA 5 cut(s) 654, 795, 858, 1008, 1243
TspGWI ACGGA 3 cut(s) 17, 53, 1249
TspRI CASTG 6 cut(s) 299, 731, 877, 928, 976, 1217
VpaK11BI GGWCC 1 cut(s) 289
XapI RAATTY 2 cut(s) 577, 823
XceI RCATGY 1 cut(s) 812
XspI CTAG 2 cut(s) 87, 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.