AT1G26870

No apical meristem (NAM) protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
N/A
Physical Location & Seq
Forward (+)
9312936 .. 9315122
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26870.1

Sequence Viewer

Length: 1257 bp
ATGGGAGATAGAAACAACGACGGTGATCAGAAAATGGAGGATGTATTGTTGCCCGGATTTAGGTTTCATCCAACCGACGAAGAGCTCGTAAGCTTCTACCTGAAGCGGAAGGTTCAACACAACCCTCTCTCCATTGAGCTCATAAGACAACTCGATATCTACAAATATGACCCCTGGGATCTTCCAAAGTTTGCGATGACGGGTGAAAAAGAATGGTACTTTTATTGTCCAAGGGACAGGAAGTATAGGAACAGCTCGAGGCCAAACCGAGTGACCGGAGCTGGTTTTTGGAAAGCCACGGGAACGGACCGGCCGATATACTCGTCAGAAGGAAACAAATGCATAGGTTTAAAGAAGTCCTTAGTGTTCTACAAAGGAAGAGCAGCGAAAGGAGTTAAGACTGATTGGATGATGCATGAGTTTCGTTTGCCTTCTCTCTCCGAACCATCTCCTCCTTCTAAGAGATTCTTCGACTCTCCTGTCTCTCCCAACGATTCATGGGCTATATGCAGAATCTTCAAAAAGACCAACACAACGACCCTAAGAGCTCTCTCTCACTCTTTTGTTTCCTCGTTACCACCAGAAACAAGCACCGACACAATGTCTAACCAAAAGCAATCAAACACATACCATTTTTCTTCAGACAAGATCCTCAAACCTAGCTCTCACTTCCAGTTTCACCATGAGAATATGAACACTCCCAAAACTAGTAATAGTACAACTCCATCCGTTCCCACTATAAGTCCCTTCTCTTACTTGGATTTCACTTCATACGACAAACCCACCAACGTTTTCAATCCGGTTTCATGTTTAGACCAACAATACCTCACAAATCTCTTTCTTGCCACACAAGAAACACAACCTCAGTTTCCCAGGCTCCCCTCGTCAAATGAAATCCCATCGTTTCTGCTAAACACGTCTTCAGATTCGACCTTCTTGGGAGAATTCACGAGCCATATCGACCTCAGCGCAGTGTTGGCCCAAGAGCAATGTCCCCCGCTTGTAAGCCTACCACAGGAGTATCAAGAGACGGGATTCGAAGGAAATGGTATAATGAAGAACATGCGTGGTTCCAATGAAGATCATCTTGGTGATCATTGCGACACACTTCGGTTTGATGATTTCACTTCAACAATTAATGAGAACCATCGTCATCATCAAGACCTGAAACAGAACATGACATTGCTGGAGAGTTATTATTCTTCTTTATCGTCCATCAATAGCGATTTGCCAGCTTGTTTCTCCAGTACAACCTGA

Protein Analysis

418

Amino Acids

47.8

Weight (kDa)

6.28

Isoelectric Point (pI)

50.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 18 - 143 1.8e-48 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 479
AciI CCGC 2 cut(s) 106, 998
AclI AACGTT 1 cut(s) 789
AclWI GGATC 2 cut(s) 186, 643
AcoI YGGCCR 1 cut(s) 311
AcsI RAATTY 1 cut(s) 944
AcuI CTGAAG 3 cut(s) 122, 624, 906
AfaI GTAC 3 cut(s) 218, 718, 1249
AfiI CCNNNNNNNGG 2 cut(s) 60, 1015
AflIII ACRYGT 1 cut(s) 915
AgsI TTSAA 4 cut(s) 116, 520, 796, 1131
AhdI GACNNNNNGTC 1 cut(s) 601
AhlI ACTAGT 1 cut(s) 707
AjiI CACGTC 1 cut(s) 918
AjnI CCWGG 2 cut(s) 173, 872
AjuI GAANNNNNNNTTGG 2 cut(s) 1071, 1103
AluBI AGCT 8 cut(s) 85, 93, 139, 255, 281, 548, 663, 1235
AluI AGCT 8 cut(s) 85, 93, 139, 255, 281, 548, 663, 1235
Alw21I GWGCWC 3 cut(s) 87, 141, 550
Alw26I GTCTC 2 cut(s) 487, 1022
AlwI GGATC 2 cut(s) 186, 643
Ama87I CYCGRG 1 cut(s) 256
AoxI GGCC 3 cut(s) 260, 311, 978
ApeKI GCWGC 1 cut(s) 383
ApoI RAATTY 1 cut(s) 944
AseI ATTAAT 1 cut(s) 1137
AspLEI GCGC 1 cut(s) 971
AspS9I GGNCC 2 cut(s) 307, 979
AsuC2I CCSGG 1 cut(s) 54
AsuHPI GGTGA 4 cut(s) 35, 215, 671, 1103
AsuII TTCGAA 1 cut(s) 1038
AvaI CYCGRG 1 cut(s) 256
AvaII GGWCC 1 cut(s) 307
BaeI ACNNNNGTAYC 2 cut(s) 1004, 1037
BanII GRGCYC 3 cut(s) 87, 141, 550
BauI CACGAG 1 cut(s) 949
BbsI GAAGAC 1 cut(s) 912
Bbv12I GWGCWC 3 cut(s) 87, 141, 550
BbvCI CCTCAGC 1 cut(s) 965
BbvI GCAGC 1 cut(s) 395
BccI CCATC 5 cut(s) 454, 733, 907, 1155, 1223
BcgI CGANNNNNNTGC 2 cut(s) 404, 438
BciT130I CCWGG 2 cut(s) 175, 874
BclI TGATCA 2 cut(s) 25, 1093
BcnI CCSGG 1 cut(s) 54
BcoDI GTCTC 2 cut(s) 487, 1022
BcuI ACTAGT 1 cut(s) 707
BfaI CTAG 2 cut(s) 660, 708
BisI GCNGC 1 cut(s) 384
BlsI GCNGC 1 cut(s) 385
Bme1390I CCNGG 3 cut(s) 54, 175, 874
Bme18I GGWCC 1 cut(s) 307
BmeRI GACNNNNNGTC 1 cut(s) 601
BmeT110I CYCGRG 1 cut(s) 256
BmgBI CACGTC 1 cut(s) 918
BmgT120I GGNCC 2 cut(s) 307, 979
BmiI GGNNCC 2 cut(s) 878, 1072
BmrFI CCNGG 3 cut(s) 54, 175, 874
BmsI GCATC 1 cut(s) 402
BpiI GAAGAC 1 cut(s) 912
BpmI CTGGAG 2 cut(s) 1208, 1228
Bpu10I CCTNAGC 1 cut(s) 965
Bpu14I TTCGAA 1 cut(s) 1038
BpuMI CCSGG 1 cut(s) 54
BsaJI CCNNGG 5 cut(s) 173, 174, 230, 297, 872
BsaWI WCCGGW 2 cut(s) 275, 799
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 2 cut(s) 60, 1015
Bse118I RCCGGY 1 cut(s) 309
Bse1I ACTGG 2 cut(s) 673, 1245
Bse3DI GCAATG 3 cut(s) 995, 1096, 1181
BseBI CCWGG 2 cut(s) 175, 874
BseDI CCNNGG 5 cut(s) 173, 174, 230, 297, 872
BseGI GGATG 4 cut(s) 46, 67, 414, 725
BseLI CCNNNNNNNGG 2 cut(s) 60, 1015
BseMI GCAATG 3 cut(s) 995, 1096, 1181
BseMII CTCAG 2 cut(s) 878, 979
BseNI ACTGG 2 cut(s) 673, 1245
BseRI GAGGAG 1 cut(s) 441
BseX3I CGGCCG 1 cut(s) 311
BseXI GCAGC 1 cut(s) 395
Bsh1285I CGRYCG 1 cut(s) 314
BshFI GGCC 3 cut(s) 262, 313, 980
BsiEI CGRYCG 1 cut(s) 314
BsiHKAI GWGCWC 3 cut(s) 87, 141, 550
BsiHKCI CYCGRG 1 cut(s) 256
BsiSI CCGG 4 cut(s) 54, 276, 310, 800
BslFI GGGAC 3 cut(s) 248, 729, 978
BslI CCNNNNNNNGG 2 cut(s) 60, 1015
BsmAI GTCTC 2 cut(s) 487, 1022
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 3 cut(s) 248, 729, 978
BsnI GGCC 3 cut(s) 262, 313, 980
BsoBI CYCGRG 1 cut(s) 256
Bsp119I TTCGAA 1 cut(s) 1038
Bsp1286I GDGCHC 3 cut(s) 87, 141, 550
Bsp143I GATC 5 cut(s) 25, 178, 648, 1081, 1093
BspACI CCGC 2 cut(s) 106, 998
BspANI GGCC 3 cut(s) 262, 313, 980
BspCNI CTCAG 2 cut(s) 877, 978
BspLI GGNNCC 2 cut(s) 878, 1072
BspPI GGATC 2 cut(s) 186, 643
BspQI GCTCTTC 2 cut(s) 75, 373
BspT104I TTCGAA 1 cut(s) 1038
BsrDI GCAATG 3 cut(s) 995, 1096, 1181
BsrFI RCCGGY 1 cut(s) 309
BsrI ACTGG 2 cut(s) 673, 1245
BssAI RCCGGY 1 cut(s) 309
BssECI CCNNGG 5 cut(s) 173, 174, 230, 297, 872
BssMI GATC 5 cut(s) 25, 178, 648, 1081, 1093
BssSI CACGAG 1 cut(s) 949
BssT1I CCWWGG 1 cut(s) 230
Bst2BI CACGAG 1 cut(s) 949
Bst2UI CCWGG 2 cut(s) 175, 874
Bst4CI ACNGT 1 cut(s) 23
Bst6I CTCTTC 2 cut(s) 75, 373
BstBI TTCGAA 1 cut(s) 1038
BstC8I GCNNGC 1 cut(s) 1233
BstDEI CTNAG 5 cut(s) 361, 459, 542, 864, 965
BstDSI CCRYGG 1 cut(s) 297
BstENI CCTNNNNNAGG 1 cut(s) 1013
BstF5I GGATG 4 cut(s) 46, 67, 414, 725
BstHHI GCGC 1 cut(s) 971
BstKTI GATC 5 cut(s) 28, 181, 651, 1084, 1096
BstMAI GTCTC 2 cut(s) 487, 1022
BstMBI GATC 5 cut(s) 25, 178, 648, 1081, 1093
BstMCI CGRYCG 1 cut(s) 314
BstMWI GCNNNNNNNGC 1 cut(s) 977
BstNI CCWGG 2 cut(s) 175, 874
BstNSI RCATGY 1 cut(s) 1066
BstSCI CCNGG 3 cut(s) 52, 173, 872
BstV1I GCAGC 1 cut(s) 395
BstV2I GAAGAC 1 cut(s) 912
BstX2I RGATCY 2 cut(s) 178, 648
BstYI RGATCY 2 cut(s) 178, 648
BstZI CGGCCG 1 cut(s) 311
BsuRI GGCC 3 cut(s) 262, 313, 980
BtgI CCRYGG 1 cut(s) 297
BtgZI GCGATG 1 cut(s) 209
BtrI CACGTC 1 cut(s) 918
BtsCI GGATG 4 cut(s) 46, 67, 414, 725
BtsI GCAGTG 1 cut(s) 978
BtsIMutI CAGTG 1 cut(s) 978
Cac8I GCNNGC 1 cut(s) 1233
CfoI GCGC 1 cut(s) 971
Cfr10I RCCGGY 1 cut(s) 309
Cfr13I GGNCC 2 cut(s) 307, 979
CpoI CGGWCCG 1 cut(s) 307
Csp6I GTAC 3 cut(s) 217, 717, 1248
CspI CGGWCCG 1 cut(s) 307
CviAII CATG 6 cut(s) 416, 498, 683, 807, 1063, 1177
CviQI GTAC 3 cut(s) 217, 717, 1248
DdeI CTNAG 5 cut(s) 361, 459, 542, 864, 965
DpnI GATC 5 cut(s) 27, 180, 650, 1083, 1095
DpnII GATC 5 cut(s) 25, 178, 648, 1081, 1093
DraI TTTAAA 1 cut(s) 351
DrdI GACNNNNNNGTC 1 cut(s) 479
DriI GACNNNNNGTC 1 cut(s) 601
DseDI GACNNNNNNGTC 1 cut(s) 479
EaeI YGGCCR 1 cut(s) 311
EagI CGGCCG 1 cut(s) 311
Eam1104I CTCTTC 2 cut(s) 75, 373
Eam1105I GACNNNNNGTC 1 cut(s) 601
EarI CTCTTC 2 cut(s) 75, 373
Ecl136II GAGCTC 3 cut(s) 85, 139, 548
EclXI CGGCCG 1 cut(s) 311
Eco130I CCWWGG 1 cut(s) 230
Eco24I GRGCYC 3 cut(s) 87, 141, 550
Eco32I GATATC 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 307
Eco52I CGGCCG 1 cut(s) 311
Eco53kI GAGCTC 3 cut(s) 85, 139, 548
Eco57I CTGAAG 3 cut(s) 122, 624, 906
Eco88I CYCGRG 1 cut(s) 256
EcoICRI GAGCTC 3 cut(s) 85, 139, 548
EcoNI CCTNNNNNAGG 1 cut(s) 1013
EcoRI GAATTC 1 cut(s) 944
EcoRII CCWGG 2 cut(s) 173, 872
EcoRV GATATC 1 cut(s) 157
EcoT14I CCWWGG 1 cut(s) 230
EcoT22I ATGCAT 2 cut(s) 344, 417
EcoT38I GRGCYC 3 cut(s) 87, 141, 550
ErhI CCWWGG 1 cut(s) 230
Esp3I CGTCTC 1 cut(s) 1022
FaeI CATG 6 cut(s) 419, 501, 686, 810, 1066, 1180
FalI AAGNNNNNCTT 6 cut(s) 344, 376, 452, 484, 1071, 1103
FaqI GGGAC 3 cut(s) 248, 729, 978
FatI CATG 6 cut(s) 415, 497, 682, 806, 1062, 1176
FauI CCCGC 1 cut(s) 1005
FbaI TGATCA 2 cut(s) 25, 1093
Fnu4HI GCNGC 1 cut(s) 384
FokI GGATG 4 cut(s) 53, 54, 421, 712
FriOI GRGCYC 3 cut(s) 87, 141, 550
Fsp4HI GCNGC 1 cut(s) 384
FspBI CTAG 2 cut(s) 660, 708
GlaI GCGC 1 cut(s) 970
GluI GCNGC 1 cut(s) 384
GsuI CTGGAG 2 cut(s) 1208, 1228
HaeIII GGCC 3 cut(s) 262, 313, 980
HapII CCGG 4 cut(s) 54, 276, 310, 800
HhaI GCGC 1 cut(s) 971
Hin1II CATG 6 cut(s) 419, 501, 686, 810, 1066, 1180
Hin6I GCGC 1 cut(s) 969
HinP1I GCGC 1 cut(s) 969
HindIII AAGCTT 1 cut(s) 91
HinfI GANTC 6 cut(s) 465, 473, 494, 513, 926, 1035
HpaII CCGG 4 cut(s) 54, 276, 310, 800
HphI GGTGA 4 cut(s) 35, 215, 671, 1103
Hpy188I TCNGA 5 cut(s) 30, 328, 442, 643, 925
Hpy188III TCNNGA 3 cut(s) 949, 1025, 1160
Hpy99I CGWCG 2 cut(s) 23, 80
HpyAV CCTTC 7 cut(s) 103, 323, 441, 465, 757, 943, 1034
HpyCH4III ACNGT 1 cut(s) 23
HpyCH4IV ACGT 2 cut(s) 789, 917
HpyCH4V TGCA 3 cut(s) 342, 415, 510
HpyF10VI GCNNNNNNNGC 1 cut(s) 977
HpyF3I CTNAG 5 cut(s) 361, 459, 542, 864, 965
HpySE526I ACGT 2 cut(s) 789, 917
Hsp92II CATG 6 cut(s) 419, 501, 686, 810, 1066, 1180
HspAI GCGC 1 cut(s) 969
Ksp22I TGATCA 2 cut(s) 25, 1093
Kzo9I GATC 5 cut(s) 25, 178, 648, 1081, 1093
LguI GCTCTTC 2 cut(s) 75, 373
LmnI GCTCC 2 cut(s) 278, 882
Lsp1109I GCAGC 1 cut(s) 395
LweI GCATC 1 cut(s) 402
MaeI CTAG 2 cut(s) 660, 708
MaeII ACGT 2 cut(s) 789, 917
MaeIII GTNAC 2 cut(s) 271, 573
MalI GATC 5 cut(s) 27, 180, 650, 1083, 1095
MboI GATC 5 cut(s) 25, 178, 648, 1081, 1093
MflI RGATCY 2 cut(s) 178, 648
MhlI GDGCHC 3 cut(s) 87, 141, 550
MluCI AATT 2 cut(s) 944, 1134
MlyI GAGTC 1 cut(s) 467
MmeI TCCRAC 1 cut(s) 95
Mph1103I ATGCAT 2 cut(s) 344, 417
MseI TTAA 3 cut(s) 350, 396, 1137
MslI CAYNNNNRTG 1 cut(s) 1089
MspI CCGG 4 cut(s) 54, 276, 310, 800
MspR9I CCNGG 3 cut(s) 54, 175, 874
MvaI CCWGG 2 cut(s) 175, 874
MwoI GCNNNNNNNGC 1 cut(s) 977
NciI CCSGG 1 cut(s) 54
NdeII GATC 5 cut(s) 25, 178, 648, 1081, 1093
NlaIII CATG 6 cut(s) 419, 501, 686, 810, 1066, 1180
NlaIV GGNNCC 2 cut(s) 878, 1072
NmuCI GTSAC 1 cut(s) 271
NsiI ATGCAT 2 cut(s) 344, 417
NspI RCATGY 1 cut(s) 1066
NspV TTCGAA 1 cut(s) 1038
PaeR7I CTCGAG 1 cut(s) 256
PasI CCCWGGG 1 cut(s) 174
PciSI GCTCTTC 2 cut(s) 75, 373
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 311
PfeI GAWTC 5 cut(s) 465, 494, 513, 926, 1035
PkrI GCNGC 1 cut(s) 385
PleI GAGTC 1 cut(s) 467
PpsI GAGTC 1 cut(s) 467
PshBI ATTAAT 1 cut(s) 1137
Psp124BI GAGCTC 3 cut(s) 87, 141, 550
Psp1406I AACGTT 1 cut(s) 789
Psp6I CCWGG 2 cut(s) 173, 872
PspGI CCWGG 2 cut(s) 173, 872
PspN4I GGNNCC 2 cut(s) 878, 1072
PspPI GGNCC 2 cut(s) 307, 979
PspXI VCTCGAGB 1 cut(s) 256
PsuI RGATCY 2 cut(s) 178, 648
RsaI GTAC 3 cut(s) 218, 718, 1249
RsaNI GTAC 3 cut(s) 217, 717, 1248
RseI CAYNNNNRTG 1 cut(s) 1089
Rsr2I CGGWCCG 1 cut(s) 307
RsrII CGGWCCG 1 cut(s) 307
SacI GAGCTC 3 cut(s) 87, 141, 550
SapI GCTCTTC 2 cut(s) 75, 373
SaqAI TTAA 3 cut(s) 350, 396, 1137
SatI GCNGC 1 cut(s) 384
Sau3AI GATC 5 cut(s) 25, 178, 648, 1081, 1093
Sau96I GGNCC 2 cut(s) 307, 979
SchI GAGTC 1 cut(s) 467
ScrFI CCNGG 3 cut(s) 54, 175, 874
SduI GDGCHC 3 cut(s) 87, 141, 550
SfaNI GCATC 1 cut(s) 402
Sfr274I CTCGAG 1 cut(s) 256
SfuI TTCGAA 1 cut(s) 1038
SinI GGWCC 1 cut(s) 307
SlaI CTCGAG 1 cut(s) 256
SmiMI CAYNNNNRTG 1 cut(s) 1089
SmlI CTYRAG 1 cut(s) 256
SmoI CTYRAG 1 cut(s) 256
SpeI ACTAGT 1 cut(s) 707
Sse9I AATT 2 cut(s) 944, 1134
SsiI CCGC 2 cut(s) 106, 998
SspMI CTAG 2 cut(s) 660, 708
SstI GAGCTC 3 cut(s) 87, 141, 550
StyD4I CCNGG 3 cut(s) 52, 173, 872
StyI CCWWGG 1 cut(s) 230
TaaI ACNGT 1 cut(s) 23
TaiI ACGT 2 cut(s) 792, 920
TaqI TCGA 6 cut(s) 153, 257, 471, 929, 960, 1038
TasI AATT 2 cut(s) 944, 1134
TatI WGTACW 2 cut(s) 716, 1247
TfiI GAWTC 5 cut(s) 465, 494, 513, 926, 1035
Tru1I TTAA 3 cut(s) 350, 396, 1137
Tru9I TTAA 3 cut(s) 350, 396, 1137
TscAI CASTG 1 cut(s) 978
TseFI GTSAC 1 cut(s) 271
TseI GCWGC 1 cut(s) 383
Tsp45I GTSAC 1 cut(s) 271
TspDTI ATGAA 8 cut(s) 56, 486, 707, 759, 795, 906, 1070, 1092
TspGWI ACGGA 2 cut(s) 320, 718
TspRI CASTG 1 cut(s) 978
VpaK11BI GGWCC 1 cut(s) 307
VspI ATTAAT 1 cut(s) 1137
XagI CCTNNNNNAGG 1 cut(s) 1013
XapI RAATTY 1 cut(s) 944
XceI RCATGY 1 cut(s) 1066
XhoI CTCGAG 1 cut(s) 256
XspI CTAG 2 cut(s) 660, 708
Zsp2I ATGCAT 2 cut(s) 344, 417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.