AT1G68210
MYB Family

Response regulator receiver domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
N/A
Physical Location & Seq
Forward (+)
25565983 .. 25569302
3320 bp
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UTR
Exon/CDS
Intron
AT1G68210.1

Sequence Viewer

Length: 2268 bp
ATGGCTGGATGCTTAGTTCCTGAATGTGCTGATGATATTTCCATCCTGCTAATCGACCATGACACTGCATCAATCGCGTCTCTCACATCAATGCTTCAACAATTTTCAAAAAGAGTGATGAGCGTGGATGTGGCAAGTAAGGCTCTATCGATGATTGAGAAGCAGAAGAAGGAAATTGGACTCATCATAGCTAACATTGAAATGCCTCACATAGACTCACATTCGTTCCTCAATGCTTTGCTTCTCAAAGATATTCCTCTCATATTGATTAATCCAGAGATAAAGACAAAAGAACCATCAGATCTTTTGACAAAAAGAGCGTGCTTTTCTCTAGATAAACCAATTTCAAATGACGACATCAAAAACATGTGGCAACACGTCTTCTCTAAAAAGAGTCAAGAGTTAAAGAAAATCAACATAACTGAAGATCAAGAGAATGTCATGGATAAAGATACATATCAGATTGAAGCTTTCCGAGCAAACCTTAAGAGACAGAGAATAAGTCAAGCTTCTTTGTTAGGAAGACGACCATTCATCGACACATTTTCAACTTATGAAACATTCCAAAAGAGAAAAAGTATTGCAAATGTTGAATGGAAAACTACACCAAGTTATGCTATTGAGATTGAGAATAAGAGAAAGGAATGGAAGAAAAGTGTTGGAAGACGTAAGAGTTTGTGGAATAGTGAGCGTCACATGAAGTTTATAGCTGCTATCTCCATTTTGGGTGAAGAAGATTTTCGTCCAAAATCCATATTAGAGATTATGAATGACCCAAACTTAACTCATCGTCAAGTCGGTAGCCACCTTCAGAAATACAAGGCTCAAATTGACCAAATAAGCTATACATTGCCAAGAAATGAATCGAGATCGATAGATAAAACATTCGAATATCCTTCGAACTACAAATATCCTTTCAAAATATCAGACTTAACAAATAATCTCATTGTAAGTAATTCCTTGTGGAATTCTTTAGAAAAGAAAAACTCTGCATCAGCCTCTATCACTCAATTTTTGTTTAAAAAACCTATTGGTGAGAAAGAGGAAACAATGCCAAAGTTTCATATAGGCGGGAAATTAGATCTAAGCAATCATTCAGTTCATGGTAACGTCCTTAACAAGCTATCTATGAATGTTAACTTCGTTCCTTCAACCATAAGTAATAATCCAGCTTACAATATTCTTTCTATCGATAGCTCTAGTATCGATAGCTCTAGCTATACTGGTTTAGTTTCAACTGGCTTAAGTAGTGAAAATTCTCCTATCCTTTATGGTTTACCATCGAATGATGGTGCATCTAACACATGCACATCTCAGATGGAATCCGAAAGGATTTCTATTCCGCAGTATGATCCTAATCAATGTCACCCACATAGATCCATCCTTGAAACTGATGTAAACCAAATAGATTTAGATTTTACTTCTATACTAGATTCTTTCGATCCTCTAGTAGATGAGTGCCTTATGAAGGAAAACAATAGATTTCTTCCAAACCCTACCATGAACCTTTTGGATACCGATATAGACAAGATGGATTGGGTTTCATTTATAGAAAACCTTAGTCACCATGATATCAATATGAACCATATGGATTGGGATCCTTCAACAGCAAATTACGTTCTTCCTGAAACCAACATGAACATAAATTTTCCTGAAAAACATACAAACGAGATAGGTTGGGTTTCTTCACAAGTAGGTTATGTTCCTTTTGAAAATATGATTCCCTCTGAAGTAGATATAAACCATATGGGCATGGGTTATTCTGGAGGAAGTATTCCCCCTCAAGAAGAAACTAATACAAATAATGTGGGCTTTGTTTCTTGTGAAATACATAGTGAAATCCCTCCCAAAACTAATATGGCCATTCTAGAAACCAATTATTCAAATCCGTTAGATTGGGTTTTCCCTGAAGATATAACTTCACTCGAAACCAATACCATCCAAAAGAGTTTGGTTTCTTGTGAAACAAGTTACGATGCTTTGGATAATATGGTTCCTTTGGAAACCAATATGGAAGAGATGAACGATGCTCTTTACGATATTTCGATTGAAGATCTGATTTCTTTTGACATTGATGCCAATGAGAAGGATATATTCTCTTGGTTAGAAGACAATGGTTTTTCTGAGGAAAATAATATGATGGAGTCATGCGAATATCATAATATAGAATCTGTGAATCAAAGTGATGATATGAAGATAGACGATAACTTTGATGATTATCGTGAATGCATGGATTGGATTAACGAAGAGATGAATAAAGATGTATGA

Protein Analysis

755

Amino Acids

86.18

Weight (kDa)

4.72

Isoelectric Point (pI)

52.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Response_reg PF00072 15 - 123 5.6e-07 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 77
AciI CCGC 2 cut(s) 1071, 1343
AclWI GGATC 5 cut(s) 1346, 1371, 1436, 1592, 1605
AcoI YGGCCR 1 cut(s) 1860
AcsI RAATTY 3 cut(s) 967, 1255, 1645
AcuI CTGAAG 4 cut(s) 444, 794, 1749, 1929
AfiI CCNNNNNNNGG 1 cut(s) 1468
AflII CTTAAG 2 cut(s) 485, 1243
AflIII ACRYGT 2 cut(s) 366, 376
AjiI CACGTC 1 cut(s) 379
AloI GAACNNNNNNTCC 1 cut(s) 32
Alw26I GTCTC 2 cut(s) 84, 484
AlwI GGATC 5 cut(s) 1346, 1371, 1436, 1592, 1605
AoxI GGCC 1 cut(s) 1860
ApeKI GCWGC 1 cut(s) 710
ApoI RAATTY 3 cut(s) 967, 1255, 1645
ArsI GACNNNNNNTTYG 2 cut(s) 2192, 2224
AseI ATTAAT 1 cut(s) 270
Asp700I GAANNNNTTC 1 cut(s) 738
AsuHPI GGTGA 4 cut(s) 740, 1046, 1358, 1556
AsuII TTCGAA 2 cut(s) 888, 899
BalI TGGCCA 1 cut(s) 1862
BamHI GGATCC 1 cut(s) 1597
BbsI GAAGAC 4 cut(s) 373, 529, 670, 2115
BbvI GCAGC 1 cut(s) 697
BccI CCATC 9 cut(s) 50, 304, 1283, 1288, 1312, 1388, 1525, 1946, 2134
BciVI GTATCC 1 cut(s) 1507
BcoDI GTCTC 2 cut(s) 84, 484
BfaI CTAG 6 cut(s) 332, 1200, 1215, 1430, 1448, 1868
BfrI CTTAAG 2 cut(s) 485, 1243
BfuI GTATCC 1 cut(s) 1507
BglII AGATCT 3 cut(s) 301, 1081, 2053
BisI GCNGC 1 cut(s) 711
BlsI GCNGC 1 cut(s) 712
BmgBI CACGTC 1 cut(s) 379
BmiI GGNNCC 2 cut(s) 1599, 1995
BmsI GCATC 6 cut(s) 77, 1001, 1304, 1966, 2017, 2065
BpiI GAAGAC 4 cut(s) 373, 529, 670, 2115
BpmI CTGGAG 1 cut(s) 1785
Bpu14I TTCGAA 2 cut(s) 888, 899
BpuEI CTTGAG 1 cut(s) 1767
Bsa29I ATCGAT 4 cut(s) 149, 872, 1191, 1206
BsaBI GATNNNNATC 4 cut(s) 456, 1356, 1596, 2217
Bsc4I CCNNNNNNNGG 1 cut(s) 1468
Bse1I ACTGG 2 cut(s) 1228, 1243
Bse3DI GCAATG 1 cut(s) 848
Bse8I GATNNNNATC 4 cut(s) 456, 1356, 1596, 2217
BseCI ATCGAT 4 cut(s) 149, 872, 1191, 1206
BseGI GGATG 5 cut(s) 14, 42, 133, 1380, 1938
BseJI GATNNNNATC 4 cut(s) 456, 1356, 1596, 2217
BseLI CCNNNNNNNGG 1 cut(s) 1468
BseMI GCAATG 1 cut(s) 848
BseMII CTCAG 2 cut(s) 1328, 2115
BseNI ACTGG 2 cut(s) 1228, 1243
BseXI GCAGC 1 cut(s) 697
Bsh1236I CGCG 1 cut(s) 77
BshFI GGCC 1 cut(s) 1862
BshVI ATCGAT 4 cut(s) 149, 872, 1191, 1206
BslI CCNNNNNNNGG 1 cut(s) 1468
BsmAI GTCTC 2 cut(s) 84, 484
BsmBI CGTCTC 1 cut(s) 84
BsmI GAATGC 1 cut(s) 2231
BsnI GGCC 1 cut(s) 1862
Bsp119I TTCGAA 2 cut(s) 888, 899
Bsp143I GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
BspACI CCGC 2 cut(s) 1071, 1343
BspANI GGCC 1 cut(s) 1862
BspCNI CTCAG 2 cut(s) 1327, 2116
BspDI ATCGAT 4 cut(s) 149, 872, 1191, 1206
BspFNI CGCG 1 cut(s) 77
BspLI GGNNCC 2 cut(s) 1599, 1995
BspPI GGATC 5 cut(s) 1346, 1371, 1436, 1592, 1605
BspT104I TTCGAA 2 cut(s) 888, 899
BspTI CTTAAG 2 cut(s) 485, 1243
BsrDI GCAATG 1 cut(s) 848
BsrI ACTGG 2 cut(s) 1228, 1243
BssMI GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
Bst6I CTCTTC 2 cut(s) 2010, 2241
BstAFI CTTAAG 2 cut(s) 485, 1243
BstBI TTCGAA 2 cut(s) 888, 899
BstC8I GCNNGC 1 cut(s) 322
BstDEI CTNAG 5 cut(s) 13, 1085, 1314, 1559, 2124
BstENI CCTNNNNNAGG 1 cut(s) 1466
BstF5I GGATG 5 cut(s) 14, 42, 133, 1380, 1938
BstFNI CGCG 1 cut(s) 77
BstKTI GATC 9 cut(s) 304, 430, 872, 1084, 1354, 1379, 1444, 1600, 2056
BstMAI GTCTC 2 cut(s) 84, 484
BstMBI GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
BstMWI GCNNNNNNNGC 3 cut(s) 74, 140, 476
BstNSI RCATGY 2 cut(s) 370, 1308
BstUI CGCG 1 cut(s) 77
BstV1I GCAGC 1 cut(s) 697
BstV2I GAAGAC 4 cut(s) 373, 529, 670, 2115
BstX2I RGATCY 5 cut(s) 301, 1081, 1376, 1597, 2053
BstYI RGATCY 5 cut(s) 301, 1081, 1376, 1597, 2053
Bsu15I ATCGAT 4 cut(s) 149, 872, 1191, 1206
BsuI GTATCC 1 cut(s) 1507
BsuRI GGCC 1 cut(s) 1862
BsuTUI ATCGAT 4 cut(s) 149, 872, 1191, 1206
BtrI CACGTC 1 cut(s) 379
BtsCI GGATG 5 cut(s) 14, 42, 133, 1380, 1938
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 63
Cac8I GCNNGC 1 cut(s) 322
ClaI ATCGAT 4 cut(s) 149, 872, 1191, 1206
CseI GACGC 2 cut(s) 66, 680
CspCI CAANNNNNGTGG 2 cut(s) 1788, 1823
DdeI CTNAG 5 cut(s) 13, 1085, 1314, 1559, 2124
DpnI GATC 9 cut(s) 303, 429, 871, 1083, 1353, 1378, 1443, 1599, 2055
DpnII GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
DraI TTTAAA 1 cut(s) 1021
EaeI YGGCCR 1 cut(s) 1860
Eam1104I CTCTTC 2 cut(s) 2010, 2241
EarI CTCTTC 2 cut(s) 2010, 2241
Eco32I GATATC 1 cut(s) 1573
Eco57I CTGAAG 4 cut(s) 444, 794, 1749, 1929
EcoNI CCTNNNNNAGG 1 cut(s) 1466
EcoRI GAATTC 1 cut(s) 967
EcoRV GATATC 1 cut(s) 1573
EcoT22I ATGCAT 1 cut(s) 2231
Esp3I CGTCTC 1 cut(s) 84
FalI AAGNNNNNCTT 2 cut(s) 493, 525
FauI CCCGC 1 cut(s) 1064
FauNDI CATATG 2 cut(s) 1587, 1746
Fnu4HI GCNGC 1 cut(s) 711
FokI GGATG 5 cut(s) 21, 29, 140, 1367, 1925
Fsp4HI GCNGC 1 cut(s) 711
FspBI CTAG 6 cut(s) 332, 1200, 1215, 1430, 1448, 1868
GluI GCNGC 1 cut(s) 711
GsuI CTGGAG 1 cut(s) 1785
HaeIII GGCC 1 cut(s) 1862
HgaI GACGC 2 cut(s) 66, 680
HincII GTYRAC 1 cut(s) 1138
HindII GTYRAC 1 cut(s) 1138
HindIII AAGCTT 2 cut(s) 468, 507
HpaI GTTAAC 1 cut(s) 1138
HphI GGTGA 4 cut(s) 740, 1046, 1358, 1556
Hpy166II GTNNAC 3 cut(s) 1138, 1277, 1399
Hpy8I GTNNAC 3 cut(s) 1138, 1277, 1399
HpyAV CCTTC 7 cut(s) 163, 818, 906, 1158, 1462, 1611, 2080
HpyCH4IV ACGT 4 cut(s) 378, 667, 1110, 1617
HpyCH4V TGCA 6 cut(s) 68, 584, 992, 1295, 1308, 2229
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 140, 476
HpyF3I CTNAG 5 cut(s) 13, 1085, 1314, 1559, 2124
HpySE526I ACGT 4 cut(s) 378, 667, 1110, 1617
KspAI GTTAAC 1 cut(s) 1138
Kzo9I GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
Lsp1109I GCAGC 1 cut(s) 697
LweI GCATC 6 cut(s) 77, 1001, 1304, 1966, 2017, 2065
MaeI CTAG 6 cut(s) 332, 1200, 1215, 1430, 1448, 1868
MaeII ACGT 4 cut(s) 378, 667, 1110, 1617
MaeIII GTNAC 5 cut(s) 692, 1106, 1364, 1562, 1970
MalI GATC 9 cut(s) 303, 429, 871, 1083, 1353, 1378, 1443, 1599, 2055
MboI GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
MflI RGATCY 5 cut(s) 301, 1081, 1376, 1597, 2053
MlsI TGGCCA 1 cut(s) 1862
MluNI TGGCCA 1 cut(s) 1862
MlyI GAGTC 4 cut(s) 174, 209, 403, 2153
MmeI TCCRAC 1 cut(s) 640
Mox20I TGGCCA 1 cut(s) 1862
Mph1103I ATGCAT 1 cut(s) 2231
MroXI GAANNNNTTC 1 cut(s) 738
MscI TGGCCA 1 cut(s) 1862
MslI CAYNNNNRTG 2 cut(s) 89, 200
Msp20I TGGCCA 1 cut(s) 1862
MspCI CTTAAG 2 cut(s) 485, 1243
Mva1269I GAATGC 1 cut(s) 2231
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 3 cut(s) 74, 140, 476
NdeI CATATG 2 cut(s) 1587, 1746
NdeII GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
NlaIV GGNNCC 2 cut(s) 1599, 1995
NmuCI GTSAC 3 cut(s) 692, 1364, 1562
NsiI ATGCAT 1 cut(s) 2231
NspI RCATGY 2 cut(s) 370, 1308
NspV TTCGAA 2 cut(s) 888, 899
PciI ACATGT 1 cut(s) 366
PctI GAATGC 1 cut(s) 2231
PdmI GAANNNNTTC 1 cut(s) 738
PfeI GAWTC 6 cut(s) 863, 1322, 1433, 1720, 2168, 2176
PkrI GCNGC 1 cut(s) 712
PleI GAGTC 4 cut(s) 174, 209, 402, 2152
PpsI GAGTC 4 cut(s) 174, 209, 402, 2152
PscI ACATGT 1 cut(s) 366
PshBI ATTAAT 1 cut(s) 270
PspN4I GGNNCC 2 cut(s) 1599, 1995
PsrI GAACNNNNNNTAC 2 cut(s) 1686, 1718
PsuI RGATCY 5 cut(s) 301, 1081, 1376, 1597, 2053
RseI CAYNNNNRTG 2 cut(s) 89, 200
SatI GCNGC 1 cut(s) 711
Sau3AI GATC 9 cut(s) 301, 427, 869, 1081, 1351, 1376, 1441, 1597, 2053
SchI GAGTC 4 cut(s) 174, 209, 403, 2153
SfaNI GCATC 6 cut(s) 77, 1001, 1304, 1966, 2017, 2065
SfuI TTCGAA 2 cut(s) 888, 899
SmiMI CAYNNNNRTG 2 cut(s) 89, 200
SmlI CTYRAG 3 cut(s) 485, 1243, 1782
SmoI CTYRAG 3 cut(s) 485, 1243, 1782
SsiI CCGC 2 cut(s) 1071, 1343
SspI AATATT 1 cut(s) 1180
SspMI CTAG 6 cut(s) 332, 1200, 1215, 1430, 1448, 1868
TaiI ACGT 4 cut(s) 381, 670, 1113, 1620
TfiI GAWTC 6 cut(s) 863, 1322, 1433, 1720, 2168, 2176
TscAI CASTG 1 cut(s) 70
TseFI GTSAC 3 cut(s) 692, 1364, 1562
TseI GCWGC 1 cut(s) 710
Tsp45I GTSAC 3 cut(s) 692, 1364, 1562
TspGWI ACGGA 1 cut(s) 1878
TspRI CASTG 1 cut(s) 70
Vha464I CTTAAG 2 cut(s) 485, 1243
VspI ATTAAT 1 cut(s) 270
XagI CCTNNNNNAGG 1 cut(s) 1466
XapI RAATTY 3 cut(s) 967, 1255, 1645
XbaI TCTAGA 2 cut(s) 331, 1867
XceI RCATGY 2 cut(s) 370, 1308
XcmI CCANNNNNNNNNTGG 2 cut(s) 1507, 1855
XmnI GAANNNNTTC 1 cut(s) 738
XspI CTAG 6 cut(s) 332, 1200, 1215, 1430, 1448, 1868
Zsp2I ATGCAT 1 cut(s) 2231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.