AT1G68670
MYB Family

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
N/A
Physical Location & Seq
Forward (+)
25781801 .. 25784118
2318 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68670.1

Sequence Viewer

Length: 1065 bp
ATGATGGTGGAGATGGATTACGCTAAGAAAATGCAGAAATGTCATGAATACGTTGAAGCACTTGAAGAAGAACAGAAGAAAATCCAAGTCTTTCAACGCGAGCTTCCTTTATGTTTAGAGCTTGTCACTCAAGCGATCGAAGCTTGTCGGAAGGAGTTATCTGGTACGACGACAACTACATCAGAACAGTGTTCAGAACAGACCACAAGTGTTTGTGGTGGTCCTGTCTTTGAAGAGTTTATTCCTATCAAGAAAATTAGTTCCTTGTGTGAAGAAGTACAAGAAGAAGAAGAAGAAGATGGTGAACATGAATCTTCTCCAGAACTTGTGAATAATAAGAAATCAGATTGGCTTAGATCTGTTCAGCTATGGAATCATTCACCGGATCTAAATCCAAAAGAGGAGCGTGTAGCTAAGAAAGCGAAAGTGGTGGAGGTGAAACCAAAAAGCGGTGCGTTTCAGCCGTTTCAAAAGCGCGTTTTGGAGACTGATTTGCAACCGGCGGTGAAAGTAGCTAGTTCGATGCCAGCGACGACGACGAGTTCTACGACGGAAACTTGTGGTGGTAAAAGTGATTTGATTAAAGCTGGAGATGAGGAAAGACGGATAGAGCAGCAGCAATCGCAGTCGCATACGCATAGAAAACAAAGGCGGTGCTGGTCGCCGGAATTACACCGTCGATTCCTAAACGCGCTTCAGCAGCTTGGAGGATCTCATGTTGCTACACCAAAGCAAATCAGGGATCACATGAAGGTTGATGGATTAACAAACGACGAAGTTAAAAGCCATTTACAGAAATATAGACTTCACACAAGAAGGCCAGCAGCAACATCCGTGGCGGCACAAAGTACCGGGAATCAGCAACAACCACAATTTGTGGTGGTTGGAGGCATATGGGTACCATCGTCACAAGATTTTCCACCACCGTCCGATGTAGCCAACAAGGGTGGTGTATATGCTCCGGTTGCGGTGGCGCAATCTCCAAAACGTTCGTTGGAGAGAAGTTGCAACTCGCCGGCGGCATCTTCCTCTACAAATACAAATACTTCTACTCCTGTGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000156 GO:0000160 GO:0001101 GO:0001763 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009267 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009737 GO:0009755 GO:0009787 GO:0009788 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009933 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010223 GO:0010346 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016036 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031537 GO:0031667 GO:0031668 GO:0031669 GO:0032101 GO:0032104 GO:0032107 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0035556 GO:0040008 GO:0042221 GO:0042592 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048519 GO:0048523 GO:0048532 GO:0048580 GO:0048583 GO:0048585 GO:0048638 GO:0048646 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051193 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0055062 GO:0055081 GO:0055083 GO:0060089 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0071496 GO:0072505 GO:0072506 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0090506 GO:0090548 GO:0097159 GO:0097305 GO:0098727 GO:0098771 GO:0099402 GO:0140110 GO:1901363 GO:1901401 GO:1901419 GO:1901420 GO:1901463 GO:1901698 GO:1901699 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:1905957 GO:1905958 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000280 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

354

Amino Acids

39.42

Weight (kDa)

6.58

Isoelectric Point (pI)

77.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HHO5_N PF26575 8 - 53 8.7e-15 HHO5-like, N-terminal domain
Myb_DNA-binding PF00249 217 - 268 8e-08 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 898
AccB1I GGYRCC 1 cut(s) 898
AccII CGCG 3 cut(s) 99, 477, 692
AciI CCGC 6 cut(s) 450, 503, 652, 839, 968, 1019
AclI AACGTT 1 cut(s) 988
AclWI GGATC 3 cut(s) 393, 718, 750
AcuI CTGAAG 1 cut(s) 680
AfaI GTAC 4 cut(s) 166, 279, 850, 900
AfiI CCNNNNNNNGG 1 cut(s) 449
AgsI TTSAA 5 cut(s) 56, 65, 95, 233, 470
AluBI AGCT 8 cut(s) 103, 121, 143, 367, 413, 515, 587, 703
AluI AGCT 8 cut(s) 103, 121, 143, 367, 413, 515, 587, 703
Alw26I GTCTC 1 cut(s) 479
AlwI GGATC 3 cut(s) 393, 718, 750
AoxI GGCC 1 cut(s) 818
ApeKI GCWGC 4 cut(s) 613, 616, 700, 824
Asp718I GGTACC 1 cut(s) 898
AspLEI GCGC 3 cut(s) 477, 694, 976
AspS9I GGNCC 1 cut(s) 221
AsuC2I CCSGG 1 cut(s) 853
AsuHPI GGTGA 4 cut(s) 314, 372, 448, 517
AvaII GGWCC 1 cut(s) 221
BaeI ACNNNNGTAYC 2 cut(s) 890, 923
BanI GGYRCC 1 cut(s) 898
BbvI GCAGC 4 cut(s) 625, 628, 712, 836
BccI CCATC 4 cut(s) 7, 293, 752, 910
BceAI ACGGC 1 cut(s) 448
BcnI CCSGG 1 cut(s) 853
BcoDI GTCTC 1 cut(s) 479
BfaI CTAG 1 cut(s) 516
BglII AGATCT 1 cut(s) 356
BisI GCNGC 6 cut(s) 614, 617, 701, 825, 840, 1020
BlsI GCNGC 6 cut(s) 615, 618, 702, 826, 841, 1021
Bme1390I CCNGG 1 cut(s) 853
Bme18I GGWCC 1 cut(s) 221
BmgT120I GGNCC 1 cut(s) 221
BmiI GGNNCC 1 cut(s) 900
BmrFI CCNGG 1 cut(s) 853
BmsI GCATC 2 cut(s) 513, 1031
BpmI CTGGAG 2 cut(s) 303, 609
BpuEI CTTGAG 1 cut(s) 114
BpuMI CCSGG 1 cut(s) 853
BsaBI GATNNNNATC 1 cut(s) 390
BsaJI CCNNGG 1 cut(s) 834
BsaWI WCCGGW 2 cut(s) 382, 961
BsaXI ACNNNNNCTCC 1 cut(s) 1036
Bsc4I CCNNNNNNNGG 1 cut(s) 449
Bse118I RCCGGY 2 cut(s) 499, 1015
Bse8I GATNNNNATC 1 cut(s) 390
BseDI CCNNGG 1 cut(s) 834
BseGI GGATG 1 cut(s) 830
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 1 cut(s) 449
BseRI GAGGAG 1 cut(s) 416
BseXI GCAGC 4 cut(s) 625, 628, 712, 836
Bsh1236I CGCG 3 cut(s) 99, 477, 692
Bsh1285I CGRYCG 1 cut(s) 138
BshFI GGCC 1 cut(s) 820
BshNI GGYRCC 1 cut(s) 898
BsiEI CGRYCG 1 cut(s) 138
BsiSI CCGG 6 cut(s) 383, 500, 665, 852, 962, 1016
BslI CCNNNNNNNGG 1 cut(s) 449
BsmAI GTCTC 1 cut(s) 479
BsnI GGCC 1 cut(s) 820
Bsp143I GATC 5 cut(s) 135, 356, 385, 710, 742
BspACI CCGC 6 cut(s) 450, 503, 652, 839, 968, 1019
BspANI GGCC 1 cut(s) 820
BspFNI CGCG 3 cut(s) 99, 477, 692
BspHI TCATGA 1 cut(s) 43
BspLI GGNNCC 1 cut(s) 900
BspPI GGATC 3 cut(s) 393, 718, 750
BspT107I GGYRCC 1 cut(s) 898
BsrFI RCCGGY 2 cut(s) 499, 1015
BssAI RCCGGY 2 cut(s) 499, 1015
BssECI CCNNGG 1 cut(s) 834
BssMI GATC 5 cut(s) 135, 356, 385, 710, 742
Bst4CI ACNGT 3 cut(s) 189, 677, 927
Bst6I CTCTTC 1 cut(s) 228
BstC8I GCNNGC 4 cut(s) 101, 528, 822, 1017
BstDEI CTNAG 3 cut(s) 24, 353, 414
BstDSI CCRYGG 1 cut(s) 834
BstF5I GGATG 1 cut(s) 830
BstFNI CGCG 3 cut(s) 99, 477, 692
BstHHI GCGC 3 cut(s) 477, 694, 976
BstKTI GATC 5 cut(s) 138, 359, 388, 713, 745
BstMAI GTCTC 1 cut(s) 479
BstMBI GATC 5 cut(s) 135, 356, 385, 710, 742
BstMCI CGRYCG 1 cut(s) 138
BstMWI GCNNNNNNNGC 5 cut(s) 140, 419, 622, 700, 965
BstSCI CCNGG 1 cut(s) 851
BstUI CGCG 3 cut(s) 99, 477, 692
BstV1I GCAGC 4 cut(s) 625, 628, 712, 836
BstX2I RGATCY 3 cut(s) 356, 385, 710
BstYI RGATCY 3 cut(s) 356, 385, 710
BsuRI GGCC 1 cut(s) 820
BtgI CCRYGG 1 cut(s) 834
BtsCI GGATG 1 cut(s) 830
BtsIMutI CAGTG 1 cut(s) 194
Cac8I GCNNGC 4 cut(s) 101, 528, 822, 1017
CciI TCATGA 1 cut(s) 43
CfoI GCGC 3 cut(s) 477, 694, 976
Cfr10I RCCGGY 2 cut(s) 499, 1015
Cfr13I GGNCC 1 cut(s) 221
Csp6I GTAC 4 cut(s) 165, 278, 849, 899
CspCI CAANNNNNGTGG 4 cut(s) 816, 851, 928, 963
CviAII CATG 4 cut(s) 44, 308, 716, 748
CviQI GTAC 4 cut(s) 165, 278, 849, 899
DdeI CTNAG 3 cut(s) 24, 353, 414
DpnI GATC 5 cut(s) 137, 358, 387, 712, 744
DpnII GATC 5 cut(s) 135, 356, 385, 710, 742
Eam1104I CTCTTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 221
Eco57I CTGAAG 1 cut(s) 680
FaeI CATG 4 cut(s) 47, 311, 719, 751
FatI CATG 4 cut(s) 43, 307, 715, 747
FauNDI CATATG 1 cut(s) 893
Fnu4HI GCNGC 6 cut(s) 614, 617, 701, 825, 840, 1020
FokI GGATG 1 cut(s) 817
Fsp4HI GCNGC 6 cut(s) 614, 617, 701, 825, 840, 1020
FspBI CTAG 1 cut(s) 516
GlaI GCGC 3 cut(s) 476, 693, 975
GluI GCNGC 6 cut(s) 614, 617, 701, 825, 840, 1020
GsuI CTGGAG 2 cut(s) 303, 609
HaeIII GGCC 1 cut(s) 820
HapII CCGG 6 cut(s) 383, 500, 665, 852, 962, 1016
HhaI GCGC 3 cut(s) 477, 694, 976
Hin1II CATG 4 cut(s) 47, 311, 719, 751
Hin6I GCGC 3 cut(s) 475, 692, 974
HinP1I GCGC 3 cut(s) 475, 692, 974
HindIII AAGCTT 1 cut(s) 141
HinfI GANTC 4 cut(s) 311, 373, 681, 856
HpaII CCGG 6 cut(s) 383, 500, 665, 852, 962, 1016
HphI GGTGA 4 cut(s) 314, 372, 448, 517
Hpy166II GTNNAC 1 cut(s) 305
Hpy188I TCNGA 5 cut(s) 150, 184, 196, 346, 931
Hpy188III TCNNGA 3 cut(s) 44, 250, 320
Hpy8I GTNNAC 1 cut(s) 305
Hpy99I CGWCG 7 cut(s) 172, 535, 538, 541, 553, 681, 776
HpyAV CCTTC 3 cut(s) 145, 745, 810
HpyCH4III ACNGT 3 cut(s) 189, 677, 927
HpyCH4IV ACGT 2 cut(s) 51, 988
HpyCH4V TGCA 3 cut(s) 34, 496, 1008
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 419, 622, 700, 965
HpyF3I CTNAG 3 cut(s) 24, 353, 414
HpySE526I ACGT 2 cut(s) 51, 988
Hsp92II CATG 4 cut(s) 47, 311, 719, 751
HspAI GCGC 3 cut(s) 475, 692, 974
KpnI GGTACC 1 cut(s) 902
KroI GCCGGC 1 cut(s) 1015
KroNI GCCGGC 1 cut(s) 1017
Kzo9I GATC 5 cut(s) 135, 356, 385, 710, 742
LmnI GCTCC 2 cut(s) 403, 964
Lsp1109I GCAGC 4 cut(s) 625, 628, 712, 836
LweI GCATC 2 cut(s) 513, 1031
MaeI CTAG 1 cut(s) 516
MaeII ACGT 2 cut(s) 51, 988
MaeIII GTNAC 2 cut(s) 124, 906
MalI GATC 5 cut(s) 137, 358, 387, 712, 744
MboI GATC 5 cut(s) 135, 356, 385, 710, 742
MflI RGATCY 3 cut(s) 356, 385, 710
MluCI AATT 3 cut(s) 255, 668, 872
MmeI TCCRAC 3 cut(s) 128, 865, 975
MnlI CCTC 6 cut(s) 394, 427, 589, 701, 881, 1039
MreI CGCCGGCG 1 cut(s) 1015
MroNI GCCGGC 1 cut(s) 1015
MseI TTAA 3 cut(s) 582, 764, 780
MspI CCGG 6 cut(s) 383, 500, 665, 852, 962, 1016
MspR9I CCNGG 1 cut(s) 853
MvnI CGCG 3 cut(s) 99, 477, 692
MwoI GCNNNNNNNGC 5 cut(s) 140, 419, 622, 700, 965
NaeI GCCGGC 1 cut(s) 1017
NciI CCSGG 1 cut(s) 853
NdeI CATATG 1 cut(s) 893
NdeII GATC 5 cut(s) 135, 356, 385, 710, 742
NgoMIV GCCGGC 1 cut(s) 1015
NlaIII CATG 4 cut(s) 47, 311, 719, 751
NlaIV GGNNCC 1 cut(s) 900
NmuCI GTSAC 2 cut(s) 124, 906
PagI TCATGA 1 cut(s) 43
PcsI WCGNNNNNNNCGW 2 cut(s) 527, 545
PdiI GCCGGC 1 cut(s) 1017
PfeI GAWTC 4 cut(s) 311, 373, 681, 856
PkrI GCNGC 6 cut(s) 615, 618, 702, 826, 841, 1021
Ple19I CGATCG 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 988
PspN4I GGNNCC 1 cut(s) 900
PspPI GGNCC 1 cut(s) 221
PsuI RGATCY 3 cut(s) 356, 385, 710
PvuI CGATCG 1 cut(s) 138
RsaI GTAC 4 cut(s) 166, 279, 850, 900
RsaNI GTAC 4 cut(s) 165, 278, 849, 899
SaqAI TTAA 3 cut(s) 582, 764, 780
SatI GCNGC 6 cut(s) 614, 617, 701, 825, 840, 1020
Sau3AI GATC 5 cut(s) 135, 356, 385, 710, 742
Sau96I GGNCC 1 cut(s) 221
ScrFI CCNGG 1 cut(s) 853
SfaNI GCATC 2 cut(s) 513, 1031
SgrAI CRCCGGYG 1 cut(s) 1015
SinI GGWCC 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 129
SmoI CTYRAG 1 cut(s) 129
Sse9I AATT 3 cut(s) 255, 668, 872
SsiI CCGC 6 cut(s) 450, 503, 652, 839, 968, 1019
SspMI CTAG 1 cut(s) 516
StyD4I CCNGG 1 cut(s) 851
TaaI ACNGT 3 cut(s) 189, 677, 927
TaiI ACGT 2 cut(s) 54, 991
TaqI TCGA 3 cut(s) 138, 521, 679
TasI AATT 3 cut(s) 255, 668, 872
TatI WGTACW 1 cut(s) 277
TauI GCSGC 2 cut(s) 842, 1022
TfiI GAWTC 4 cut(s) 311, 373, 681, 856
Tru1I TTAA 3 cut(s) 582, 764, 780
Tru9I TTAA 3 cut(s) 582, 764, 780
TscAI CASTG 1 cut(s) 194
TseFI GTSAC 2 cut(s) 124, 906
TseI GCWGC 4 cut(s) 613, 616, 700, 824
Tsp45I GTSAC 2 cut(s) 124, 906
TspDTI ATGAA 3 cut(s) 60, 324, 764
TspGWI ACGGA 3 cut(s) 566, 619, 823
TspRI CASTG 1 cut(s) 194
VpaK11BI GGWCC 1 cut(s) 221
XspI CTAG 1 cut(s) 516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.