Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

26360235 .. 26362010

Gene Structure 1776 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G69990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGAAAACGATCTCAATCTTCTTCGTCATCATCTTAATGTCATCTTCTCACGCAGAAGACGATGTACTCTGTCTCAAAGGCTTTAAATCATCACTCAAAGATCCTTCAAATCAACTCAACACATGGTCTTTCCCTAATTCATCATCGTCGATTTGCAAACTCACCGGAGTTTCTTGCTGGAACGCTAAAGAGAATCGAATTCTCTCTCTTCAGCTTCAATCAATGCAACTCTCTGGTCAAATCCCTGAATCTCTTAAACTATGTCGGAGTTTACAATCTTTAGATCTTTCCTTTAATGATTTCTCCGGTTTGATTCCTTCACAAATATGTTCTTGGCTTCCTTATCTTGTTACTTTAGATCTTTCCGGTAACAAACTCTCCGGTTCGATACCGTCTCAGATCGTTGACTGTAAATTCTTAAACAGCTTAGCTCTAAACCAGAACAAGTTAACCGGTTCGATTCCGTCTGAATTAACCCGGTTAAACCGTCTCCAACGACTTTCTCTAGCTGATAACGATCTCTCTGGTTCGATTCCCTCCGAGCTATCTCATTACGGAGAAGATGGTTTTCGCGGTAATGGCGGACTTTGTGGTAAGCCGTTATCCAACTGCGGTTCGTTTAACGGTAAAAACTTAACGATCATTGTAACTGCTGGCGTTATTGGAGCTGTTGGTTCATTGTGTGTTGGATTTGGGATGTTTTGGTGGTTCTTTATTAGAGATAGGAGGAAGATGAATAACTACGGTTATGGCGCCGGAAAATGTAAGGATGATAGTGATTGGATTGGTTTGTTGAGATCACATAAGCTTGTGCAAGTTACTCTGTTTCAGAAACCTATTGTGAAGATCAAATTGGTTGATTTGATTGAAGCTACGAACGGTTTTGATTCCGGGAATATCGTTGTTTCGTCGAGAAGTGGTGTCTCGTACAAAGCTGATTTGCCTGATGGGTCTACATTGGAGGTTAAGAGGCTTAGTAGTTGTTGTGAGCTTAGTGAGAAACAGTTTAGGTCTGAGATTAACAAGTTAGGTCAGATCAGGCATCCGAATTTGGTTCCGCTTCTCGGGTTTTGCGTTGTGGAAGACGAGATATTGTTGGTGTATAAGCATATGGCTAATGGGACGTTGTATTCTCAGCTGCAGCAATGGGATATTGATTGGCCAACTCGGGTTAGAGTCGCTGTTGGAGCGGCTAGAGGGCTAGCTTGGTTGCACCATGGATGTCAACCGTTGTATATGCATCAATATATCAGCTCAAATGTGATTCTTCTTGACGAAGATTTCGATGCTCGTGTTATTGATTACGGTTTGGGGAAGTTAGTGAGTTCTCAAGACTCTAAAGATAGCTCGTTTAGTAACGGCAAGTTTGGTTACGTTGCGCCTGAGTATTCGAGCACTATGGTTGCGTCTTTGAGTGGAGATGTGTATGGGTTTGGGATTGTGCTTCTTGAGATTGTTACAGGACAAAAGCCTGTTTTGATTAACAACGGTGAAGAAGGGTTTAAGGAGAGTTTAGTGGAGTGGGTGAGTAAGCATTTGAGTAATGGTAGAAGCAAAGATGCTATTGATAGAAGGATTTTTGGTAAAGGATATGATGATGAGATAATGCAAGTTTTGAGAATTGCGTGTAGTTGCGTTGTATCGAGGCCTAAAGAAAGACCGTTGATGATCCAAGTTTATGAATCTTTGAAGAATTTGGGAGATCAACATGGTTTCTTCTCTGAGTATAGCGATGAGTTTCCACTCATCTTTAACAAACAAGAACACTTAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002832 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0008150 GO:0009507 GO:0009536 GO:0016020 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043901 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0071944 GO:0080134 GO:1900150 GO:1900424 GO:1900425

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

591

Amino Acids

65.55

Weight (kDa)

7.11

Isoelectric Point (pI)

38.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	19 - 60	4.8e-08	Leucine rich repeat N-terminal domain
LRR_8	PF13855	114 - 174	2.8e-06	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	320 - 563	8.3e-28	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	330 - 558	2.5e-20	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	752
AccBSI	CCGCTC	1 cut(s)	1190
AccI	GTMKAC	1 cut(s)	953
AccII	CGCG	1 cut(s)	573
AciI	CCGC	5 cut(s)	573, 582, 612, 1058, 1190
AclWI	GGATC	2 cut(s)	95, 1663
AcoI	YGGCCR	1 cut(s)	1160
AcsI	RAATTY	4 cut(s)	198, 413, 1048, 1693
AcuI	CTGAAG	1 cut(s)	194
AcyI	GRCGYC	1 cut(s)	753
AfaI	GTAC	2 cut(s)	66, 929
AfiI	CCNNNNNNNGG	1 cut(s)	1064
AgeI	ACCGGT	1 cut(s)	452
AgsI	TTSAA	4 cut(s)	108, 218, 869, 1690
AjuI	GAANNNNNNNTTGG	2 cut(s)	836, 868
Alw21I	GWGCWC	1 cut(s)	1397
Alw26I	GTCTC	4 cut(s)	77, 399, 494, 928
AlwI	GGATC	2 cut(s)	95, 1663
Ama87I	CYCGRG	2 cut(s)	1064, 1167
AoxI	GGCC	2 cut(s)	1160, 1646
ApeKI	GCWGC	2 cut(s)	1138, 1141
ApoI	RAATTY	4 cut(s)	198, 413, 1048, 1693
ArsI	GACNNNNNNTTYG	2 cut(s)	1265, 1297
AsiGI	ACCGGT	1 cut(s)	452
AspLEI	GCGC	2 cut(s)	755, 1381
AsuC2I	CCSGG	2 cut(s)	478, 892
AsuHPI	GGTGA	3 cut(s)	154, 1502, 1537
AsuNHI	GCTAGC	1 cut(s)	1201
AvaI	CYCGRG	2 cut(s)	1064, 1167
BalI	TGGCCA	1 cut(s)	1162
BanI	GGYRCC	1 cut(s)	752
BarI	GAAGNNNNNNTAC	2 cut(s)	48, 80
BauI	CACGAG	1 cut(s)	1290
BbsI	GAAGAC	2 cut(s)	63, 1089
Bbv12I	GWGCWC	1 cut(s)	1397
BbvI	GCAGC	2 cut(s)	1125, 1153
BccI	CCATC	2 cut(s)	557, 941
BceAI	ACGGC	2 cut(s)	583, 1375
BcnI	CCSGG	2 cut(s)	478, 892
BcoDI	GTCTC	4 cut(s)	77, 399, 494, 928
BfaI	CTAG	3 cut(s)	506, 1194, 1202
BfmI	CTRYAG	1 cut(s)	1139
BfoI	RGCGCY	1 cut(s)	756
BglII	AGATCT	2 cut(s)	283, 358
BisI	GCNGC	3 cut(s)	1139, 1142, 1191
BlpI	GCTNAGC	1 cut(s)	427
BlsI	GCNGC	3 cut(s)	1140, 1143, 1192
Bme1390I	CCNGG	2 cut(s)	478, 892
BmeT110I	CYCGRG	2 cut(s)	1064, 1167
BmiI	GGNNCC	2 cut(s)	754, 1056
BmrFI	CCNGG	2 cut(s)	478, 892
BmsI	GCATC	4 cut(s)	1051, 1249, 1276, 1549
BmtI	GCTAGC	1 cut(s)	1205
BpiI	GAAGAC	2 cut(s)	63, 1089
Bpu1102I	GCTNAGC	1 cut(s)	427
BpuEI	CTTGAG	2 cut(s)	1314, 1469
BpuMI	CCSGG	2 cut(s)	478, 892
BsaBI	GATNNNNATC	2 cut(s)	14, 516
BsaHI	GRCGYC	1 cut(s)	753
BsaJI	CCNNGG	1 cut(s)	1216
BsaWI	WCCGGW	5 cut(s)	164, 305, 365, 380, 452
BsaXI	ACNNNNNCTCC	2 cut(s)	362, 392
Bsc4I	CCNNNNNNNGG	1 cut(s)	1064
Bse118I	RCCGGY	1 cut(s)	452
Bse3DI	GCAATG	1 cut(s)	1151
Bse8I	GATNNNNATC	2 cut(s)	14, 516
BseDI	CCNNGG	1 cut(s)	1216
BseGI	GGATG	4 cut(s)	702, 775, 1042, 1226
BseJI	GATNNNNATC	2 cut(s)	14, 516
BseLI	CCNNNNNNNGG	1 cut(s)	1064
BseMI	GCAATG	1 cut(s)	1151
BseMII	CTCAG	5 cut(s)	410, 1005, 1148, 1374, 1713
BseXI	GCAGC	2 cut(s)	1125, 1153
Bsh1236I	CGCG	1 cut(s)	573
BshFI	GGCC	2 cut(s)	1162, 1648
BshNI	GGYRCC	1 cut(s)	752
BshTI	ACCGGT	1 cut(s)	452
BsiHKAI	GWGCWC	1 cut(s)	1397
BsiHKCI	CYCGRG	2 cut(s)	1064, 1167
BsiSI	CCGG	8 cut(s)	165, 306, 366, 381, 453, 478, 756, 891
BslFI	GGGAC	1 cut(s)	1135
BslI	CCNNNNNNNGG	1 cut(s)	1064
BsmAI	GTCTC	4 cut(s)	77, 399, 494, 928
BsmBI	CGTCTC	2 cut(s)	399, 494
BsmFI	GGGAC	1 cut(s)	1135
BsnI	GGCC	2 cut(s)	1162, 1648
BsoBI	CYCGRG	2 cut(s)	1064, 1167
Bsp1286I	GDGCHC	1 cut(s)	1397
Bsp1720I	GCTNAGC	1 cut(s)	427
Bsp19I	CCATGG	1 cut(s)	1216
BspACI	CCGC	5 cut(s)	573, 582, 612, 1058, 1190
BspANI	GGCC	2 cut(s)	1162, 1648
BspCNI	CTCAG	5 cut(s)	409, 1006, 1147, 1375, 1714
BspFNI	CGCG	1 cut(s)	573
BspLI	GGNNCC	2 cut(s)	754, 1056
BspMAI	CTGCAG	1 cut(s)	1143
BspOI	GCTAGC	1 cut(s)	1205
BspPI	GGATC	2 cut(s)	95, 1663
BspT107I	GGYRCC	1 cut(s)	752
BsrBI	CCGCTC	1 cut(s)	1190
BsrDI	GCAATG	1 cut(s)	1151
BsrFI	RCCGGY	1 cut(s)	452
BssAI	RCCGGY	1 cut(s)	452
BssECI	CCNNGG	1 cut(s)	1216
BssNI	GRCGYC	1 cut(s)	753
BssSI	CACGAG	1 cut(s)	1290
BssT1I	CCWWGG	1 cut(s)	1216
Bst2BI	CACGAG	1 cut(s)	1290
Bst6I	CTCTTC	1 cut(s)	213
BstACI	GRCGYC	1 cut(s)	753
BstC8I	GCNNGC	2 cut(s)	655, 1203
BstDEI	CTNAG	8 cut(s)	396, 427, 974, 992, 1014, 1134, 1383, 1722
BstDSI	CCRYGG	1 cut(s)	1216
BstF5I	GGATG	4 cut(s)	702, 775, 1042, 1226
BstFNI	CGCG	1 cut(s)	573
BstH2I	RGCGCY	1 cut(s)	756
BstHHI	GCGC	2 cut(s)	755, 1381
BstMAI	GTCTC	4 cut(s)	77, 399, 494, 928
BstMWI	GCNNNNNNNGC	2 cut(s)	579, 1187
BstSCI	CCNGG	2 cut(s)	476, 890
BstSFI	CTRYAG	1 cut(s)	1139
BstUI	CGCG	1 cut(s)	573
BstV1I	GCAGC	2 cut(s)	1125, 1153
BstV2I	GAAGAC	2 cut(s)	63, 1089
BstX2I	RGATCY	3 cut(s)	100, 283, 358
BstYI	RGATCY	3 cut(s)	100, 283, 358
BsuRI	GGCC	2 cut(s)	1162, 1648
BtgI	CCRYGG	1 cut(s)	1216
BtgZI	GCGATG	1 cut(s)	1746
BtsCI	GGATG	4 cut(s)	702, 775, 1042, 1226
Cac8I	GCNNGC	2 cut(s)	655, 1203
CfoI	GCGC	2 cut(s)	755, 1381
Cfr10I	RCCGGY	1 cut(s)	452
CseI	GACGC	1 cut(s)	1395
Csp6I	GTAC	2 cut(s)	65, 928
CspAI	ACCGGT	1 cut(s)	452
CviAII	CATG	3 cut(s)	123, 1217, 1709
CviQI	GTAC	2 cut(s)	65, 928
DdeI	CTNAG	8 cut(s)	396, 427, 974, 992, 1014, 1134, 1383, 1722
DinI	GGCGCC	1 cut(s)	754
DraI	TTTAAA	1 cut(s)	85
EaeI	YGGCCR	1 cut(s)	1160
Eam1104I	CTCTTC	1 cut(s)	213
EarI	CTCTTC	1 cut(s)	213
EciI	GGCGGA	1 cut(s)	597
Eco130I	CCWWGG	1 cut(s)	1216
Eco147I	AGGCCT	1 cut(s)	1648
Eco57I	CTGAAG	1 cut(s)	194
Eco88I	CYCGRG	2 cut(s)	1064, 1167
EcoRI	GAATTC	1 cut(s)	198
EcoT14I	CCWWGG	1 cut(s)	1216
EcoT22I	ATGCAT	1 cut(s)	1242
EgeI	GGCGCC	1 cut(s)	754
EheI	GGCGCC	1 cut(s)	754
ErhI	CCWWGG	1 cut(s)	1216
Esp3I	CGTCTC	2 cut(s)	399, 494
FaeI	CATG	3 cut(s)	126, 1220, 1712
FaqI	GGGAC	1 cut(s)	1135
FatI	CATG	3 cut(s)	122, 1216, 1708
FauNDI	CATATG	1 cut(s)	1110
FblI	GTMKAC	1 cut(s)	953
Fnu4HI	GCNGC	3 cut(s)	1139, 1142, 1191
FokI	GGATG	4 cut(s)	709, 782, 1029, 1233
Fsp4HI	GCNGC	3 cut(s)	1139, 1142, 1191
FspBI	CTAG	3 cut(s)	506, 1194, 1202
GlaI	GCGC	2 cut(s)	754, 1380
GluI	GCNGC	3 cut(s)	1139, 1142, 1191
HaeII	RGCGCY	1 cut(s)	756
HaeIII	GGCC	2 cut(s)	1162, 1648
HapII	CCGG	8 cut(s)	165, 306, 366, 381, 453, 478, 756, 891
HgaI	GACGC	1 cut(s)	1395
HhaI	GCGC	2 cut(s)	755, 1381
Hin1I	GRCGYC	1 cut(s)	753
Hin1II	CATG	3 cut(s)	126, 1220, 1712
Hin6I	GCGC	2 cut(s)	753, 1379
HinP1I	GCGC	2 cut(s)	753, 1379
HincII	GTYRAC	3 cut(s)	406, 450, 1226
HindII	GTYRAC	3 cut(s)	406, 450, 1226
HindIII	AAGCTT	1 cut(s)	806
HpaI	GTTAAC	1 cut(s)	450
HpaII	CCGG	8 cut(s)	165, 306, 366, 381, 453, 478, 756, 891
HphI	GGTGA	3 cut(s)	154, 1502, 1537
Hpy166II	GTNNAC	5 cut(s)	272, 406, 450, 954, 1226
Hpy188I	TCNGA	9 cut(s)	267, 399, 469, 541, 831, 1015, 1035, 1047, 1723
Hpy188III	TCNNGA	4 cut(s)	912, 1271, 1331, 1448
Hpy8I	GTNNAC	5 cut(s)	272, 406, 450, 954, 1226
Hpy99I	CGWCG	2 cut(s)	151, 913
HpyAV	CCTTC	4 cut(s)	114, 327, 1490, 1566
HpyCH4IV	ACGT	2 cut(s)	1124, 1374
HpyCH4V	TGCA	7 cut(s)	156, 226, 814, 1141, 1213, 1240, 1609
HpyF10VI	GCNNNNNNNGC	2 cut(s)	579, 1187
HpyF3I	CTNAG	8 cut(s)	396, 427, 974, 992, 1014, 1134, 1383, 1722
HpySE526I	ACGT	2 cut(s)	1124, 1374
Hsp92I	GRCGYC	1 cut(s)	753
Hsp92II	CATG	3 cut(s)	126, 1220, 1712
HspAI	GCGC	2 cut(s)	753, 1379
KasI	GGCGCC	1 cut(s)	752
KspAI	GTTAAC	1 cut(s)	450
LmnI	GCTCC	2 cut(s)	665, 1187
Lsp1109I	GCAGC	2 cut(s)	1125, 1153
LweI	GCATC	4 cut(s)	1051, 1249, 1276, 1549
MaeI	CTAG	3 cut(s)	506, 1194, 1202
MaeII	ACGT	2 cut(s)	1124, 1374
MaeIII	GTNAC	7 cut(s)	349, 368, 646, 817, 1355, 1370, 1456
MbiI	CCGCTC	1 cut(s)	1190
MflI	RGATCY	3 cut(s)	100, 283, 358
MhlI	GDGCHC	1 cut(s)	1397
MlsI	TGGCCA	1 cut(s)	1162
MluCI	AATT	8 cut(s)	136, 198, 413, 470, 851, 1048, 1620, 1693
MluNI	TGGCCA	1 cut(s)	1162
Mly113I	GGCGCC	1 cut(s)	753
MlyI	GAGTC	2 cut(s)	1185, 1328
MmeI	TCCRAC	5 cut(s)	245, 517, 630, 667, 1165
MnlI	CCTC	6 cut(s)	547, 720, 955, 963, 1190, 1638
Mox20I	TGGCCA	1 cut(s)	1162
Mph1103I	ATGCAT	1 cut(s)	1242
MscI	TGGCCA	1 cut(s)	1162
MslI	CAYNNNNRTG	2 cut(s)	35, 325
Msp20I	TGGCCA	1 cut(s)	1162
MspA1I	CMGCKG	1 cut(s)	1138
MspI	CCGG	8 cut(s)	165, 306, 366, 381, 453, 478, 756, 891
MspR9I	CCNGG	2 cut(s)	478, 892
MvnI	CGCG	1 cut(s)	573
MwoI	GCNNNNNNNGC	2 cut(s)	579, 1187
NarI	GGCGCC	1 cut(s)	753
NciI	CCSGG	2 cut(s)	478, 892
NcoI	CCATGG	1 cut(s)	1216
NdeI	CATATG	1 cut(s)	1110
NheI	GCTAGC	1 cut(s)	1201
NlaIII	CATG	3 cut(s)	126, 1220, 1712
NlaIV	GGNNCC	2 cut(s)	754, 1056
NsiI	ATGCAT	1 cut(s)	1242
PceI	AGGCCT	1 cut(s)	1648
PcsI	WCGNNNNNNNCGW	3 cut(s)	57, 1071, 1281
PfeI	GAWTC	8 cut(s)	193, 248, 313, 460, 532, 887, 1264, 1682
PfoI	TCCNGGA	1 cut(s)	890
PinAI	ACCGGT	1 cut(s)	452
PkrI	GCNGC	3 cut(s)	1140, 1143, 1192
PleI	GAGTC	2 cut(s)	1184, 1328
PluTI	GGCGCC	1 cut(s)	756
PpsI	GAGTC	2 cut(s)	1184, 1328
PspN4I	GGNNCC	2 cut(s)	754, 1056
PstI	CTGCAG	1 cut(s)	1143
PsuI	RGATCY	3 cut(s)	100, 283, 358
PvuII	CAGCTG	1 cut(s)	1138
RsaI	GTAC	2 cut(s)	66, 929
RsaNI	GTAC	2 cut(s)	65, 928
RseI	CAYNNNNRTG	2 cut(s)	35, 325
SatI	GCNGC	3 cut(s)	1139, 1142, 1191
SchI	GAGTC	2 cut(s)	1185, 1328
ScrFI	CCNGG	2 cut(s)	478, 892
SduI	GDGCHC	1 cut(s)	1397
SfaNI	GCATC	4 cut(s)	1051, 1249, 1276, 1549
SfcI	CTRYAG	1 cut(s)	1139
SfoI	GGCGCC	1 cut(s)	754
SmiMI	CAYNNNNRTG	2 cut(s)	35, 325
SmlI	CTYRAG	2 cut(s)	1329, 1448
SmoI	CTYRAG	2 cut(s)	1329, 1448
Sse9I	AATT	8 cut(s)	136, 198, 413, 470, 851, 1048, 1620, 1693
SseBI	AGGCCT	1 cut(s)	1648
SsiI	CCGC	5 cut(s)	573, 582, 612, 1058, 1190
SspDI	GGCGCC	1 cut(s)	752
SspMI	CTAG	3 cut(s)	506, 1194, 1202
StuI	AGGCCT	1 cut(s)	1648
StyD4I	CCNGG	2 cut(s)	476, 890
StyI	CCWWGG	1 cut(s)	1216
TaiI	ACGT	2 cut(s)	1127, 1377
TaqI	TCGA	9 cut(s)	149, 196, 386, 458, 530, 911, 1284, 1391, 1643
TasI	AATT	8 cut(s)	136, 198, 413, 470, 851, 1048, 1620, 1693
TatI	WGTACW	1 cut(s)	64
TauI	GCSGC	1 cut(s)	1193
TfiI	GAWTC	8 cut(s)	193, 248, 313, 460, 532, 887, 1264, 1682
TseI	GCWGC	2 cut(s)	1138, 1141
TspDTI	ATGAA	5 cut(s)	17, 129, 666, 749, 1695
TspGWI	ACGGA	2 cut(s)	453, 570
XapI	RAATTY	4 cut(s)	198, 413, 1048, 1693
XmiI	GTMKAC	1 cut(s)	953
XspI	CTAG	3 cut(s)	506, 1194, 1202
Zsp2I	ATGCAT	1 cut(s)	1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.