AT2G17090

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
N/A
Physical Location & Seq
Reverse (-)
7434919 .. 7437314
2396 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17090.1

Sequence Viewer

Length: 1398 bp
ATGGGTTGTTGTTACTCACTATCTTCAACAGTAGATCCTGTTCAAGACCACACGACCGATGCTTCTTCCGAACCTAGAAACGGCGGAGGAGAAGATCCACCATTGACAAAATTCTCTTTTTCCGCTCTCAAGACGGCCACAAATCATTTTAGTCCCGAAAACATCGTTTCAGATCAAACCTCCGATGTTGTCTTTAAAGGACGTTTGCAAAACGGTGGTTTCGTCGCTATCAAGAGATTTAATAACATGGCTTGGTCTGATCCTAAACTATTTTTGGAAGAGGCACAAAGAGTAGGGAAGTTAAGACACAAGAGACTCGTAAATTTGATTGGATATTGCTGTGATGGAGATAAAAGGTTTCTTGTTGCAGATTTCATGGCTAATGATACTCTTGCGAAGCGTTTATTCCAGCGGAAATATCAAACCATGGATTGGTCTATTAGGTTAAGAGTCGCCTATTTTGTAGCTGAAGCATTGGATTATTGCAACACTGCAGGCTTTGCATCATACAATAACTTAAGCGCTTACAAGGTTTTGTTTGATGAGGATGGTGATGCATGTCTTTCTTGTTTCGGCTTGATGAAGGAGATTAATAATGATCAAATTACAACAGGAAGTGTGAACCCTGAAAATGTGATATACCGATTTGGTACTGTCCTTGTGAATCTTCTAAGTGGAAAGCAAATTCCTCCAAGCCACGCTCCTGAGATGATACATCGAAAGAATGTGTTTAAGTTGATGGATCCATACCTGAAGGGGAAGTTCTCCATAGATGAAGCTAACGTAGTTTATAAACTCGCCTCTCAATGTTTGAAGTACGAGGGTCAAGAGAGTCCCAACACAAAAGAGATTGTTGCAACGCTTGAAACCTTGCAAACTAGAACAGAAGCTCCATCATATGAAGTTGTTGAAATGACAAACCAAGAGAAGGATGCATCATCGTCAAGTAATCTTTCGCCACTAGGAGAGGCTTGTTTGAGAATGGACCTCGCATCGATTCATTCAATCTTGGTCTTGGCAGGATATGATGATGACAAGGATATCATCGAGTTATCTTTCGAAGAATGGATACAAGAGGTGAAAGAACTTCAAGATGTTCGAAGAAACGGTGATCGAGCCTTCGTAGAGCAAGACTTCAAAACCGCTATTGCCTGTTATTCTCAGTTCGTTGAAGAGAGGTCATTGGTATACCCAAGTGTTTACGCAAGGCGTAGTCTAAGCTATCTATTCTGCGATGAGCCAGAAAAGGCCCTCCTCGATGGGATGCATGCACAGGGAGTGTTTCCTGATTGGCCAACCGCCTTCTACTTGCAGTCTGTGGCATTAGCCAAACTCGACATGAACACTGATTCTGCTGATACTTTGAAAGAAGCAGCTCTTCTTGAAGTAAAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

465

Amino Acids

52.28

Weight (kDa)

5.04

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 63 - 277 5.4e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 64 - 202 6.9e-15 Protein tyrosine and serine/threonine kinase
TPR_BSK1_C PF25575 323 - 439 3.3e-47 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 792
AccB7I CCANNNNNTGG 1 cut(s) 432
AccBSI CCGCTC 1 cut(s) 125
AccI GTMKAC 1 cut(s) 1188
AciI CCGC 5 cut(s) 84, 123, 412, 1143, 1299
AclWI GGATC 5 cut(s) 29, 89, 254, 737, 750
AcoI YGGCCR 2 cut(s) 135, 1292
AcsI RAATTY 3 cut(s) 110, 322, 684
AcuI CTGAAG 2 cut(s) 489, 773
AfaI GTAC 2 cut(s) 652, 818
AfeI AGCGCT 1 cut(s) 523
AfiI CCNNNNNNNGG 3 cut(s) 80, 432, 928
AflII CTTAAG 1 cut(s) 517
AloI GAACNNNNNNTCC 2 cut(s) 874, 906
AluBI AGCT 5 cut(s) 467, 779, 890, 1221, 1376
AluI AGCT 5 cut(s) 467, 779, 890, 1221, 1376
Alw26I GTCTC 1 cut(s) 307
AlwI GGATC 5 cut(s) 29, 89, 254, 737, 750
Aor51HI AGCGCT 1 cut(s) 523
AoxI GGCC 3 cut(s) 135, 1248, 1292
ApeKI GCWGC 1 cut(s) 1373
ApoI RAATTY 3 cut(s) 110, 322, 684
AseI ATTAAT 1 cut(s) 591
AspLEI GCGC 1 cut(s) 524
AspS9I GGNCC 2 cut(s) 985, 1249
AsuHPI GGTGA 3 cut(s) 563, 1090, 1121
AsuII TTCGAA 2 cut(s) 1059, 1099
AvaII GGWCC 1 cut(s) 985
BalI TGGCCA 1 cut(s) 1294
BamHI GGATCC 1 cut(s) 742
BarI GAAGNNNNNNTAC 2 cut(s) 1053, 1085
BbvI GCAGC 1 cut(s) 1385
BccI CCATC 5 cut(s) 338, 542, 733, 901, 1253
BceAI ACGGC 2 cut(s) 97, 150
BciVI GTATCC 1 cut(s) 1062
BclI TGATCA 1 cut(s) 598
BcoDI GTCTC 1 cut(s) 307
BfaI CTAG 3 cut(s) 75, 879, 962
BfmI CTRYAG 1 cut(s) 492
BfoI RGCGCY 1 cut(s) 525
BfrI CTTAAG 1 cut(s) 517
BfuI GTATCC 1 cut(s) 1062
BisI GCNGC 1 cut(s) 1374
BlsI GCNGC 1 cut(s) 1375
Bme18I GGWCC 1 cut(s) 985
BmgT120I GGNCC 2 cut(s) 985, 1249
BmiI GGNNCC 1 cut(s) 744
BmsI GCATC 7 cut(s) 49, 512, 544, 922, 944, 1001, 1254
Bpu14I TTCGAA 2 cut(s) 1059, 1099
BpuEI CTTGAG 1 cut(s) 113
Bsa29I ATCGAT 1 cut(s) 995
BsaJI CCNNGG 1 cut(s) 426
BsaXI ACNNNNNCTCC 2 cut(s) 874, 904
Bsc4I CCNNNNNNNGG 3 cut(s) 80, 432, 928
BseCI ATCGAT 1 cut(s) 995
BseDI CCNNGG 1 cut(s) 426
BseGI GGATG 3 cut(s) 553, 937, 1269
BseLI CCNNNNNNNGG 3 cut(s) 80, 432, 928
BseMII CTCAG 2 cut(s) 696, 1175
BseRI GAGGAG 2 cut(s) 102, 1244
BseXI GCAGC 1 cut(s) 1385
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 3 cut(s) 137, 1250, 1294
BshVI ATCGAT 1 cut(s) 995
BsiEI CGRYCG 1 cut(s) 57
BslFI GGGAC 2 cut(s) 138, 819
BslI CCNNNNNNNGG 3 cut(s) 80, 432, 928
BsmAI GTCTC 1 cut(s) 307
BsmFI GGGAC 2 cut(s) 138, 819
BsnI GGCC 3 cut(s) 137, 1250, 1294
Bsp119I TTCGAA 2 cut(s) 1059, 1099
Bsp143I GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 5 cut(s) 84, 123, 412, 1143, 1299
BspANI GGCC 3 cut(s) 137, 1250, 1294
BspCNI CTCAG 2 cut(s) 697, 1174
BspDI ATCGAT 1 cut(s) 995
BspLI GGNNCC 1 cut(s) 744
BspMAI CTGCAG 1 cut(s) 496
BspPI GGATC 5 cut(s) 29, 89, 254, 737, 750
BspQI GCTCTTC 1 cut(s) 1383
BspT104I TTCGAA 2 cut(s) 1059, 1099
BspTI CTTAAG 1 cut(s) 517
BsrBI CCGCTC 1 cut(s) 125
BssECI CCNNGG 1 cut(s) 426
BssMI GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
BssNAI GTATAC 1 cut(s) 1189
BssT1I CCWWGG 1 cut(s) 426
Bst1107I GTATAC 1 cut(s) 1189
Bst4CI ACNGT 4 cut(s) 31, 215, 655, 1109
Bst6I CTCTTC 3 cut(s) 273, 1167, 1383
BstAFI CTTAAG 1 cut(s) 517
BstAPI GCANNNNNTGC 1 cut(s) 500
BstBI TTCGAA 2 cut(s) 1059, 1099
BstC8I GCNNGC 2 cut(s) 496, 1269
BstDEI CTNAG 4 cut(s) 671, 705, 1161, 1217
BstDSI CCRYGG 1 cut(s) 426
BstF5I GGATG 3 cut(s) 553, 937, 1269
BstH2I RGCGCY 1 cut(s) 525
BstHHI GCGC 1 cut(s) 524
BstKTI GATC 7 cut(s) 37, 97, 175, 262, 601, 745, 1114
BstMAI GTCTC 1 cut(s) 307
BstMBI GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstNSI RCATGY 2 cut(s) 561, 1271
BstSFI CTRYAG 1 cut(s) 492
BstV1I GCAGC 1 cut(s) 1385
BstX2I RGATCY 3 cut(s) 34, 94, 742
BstYI RGATCY 3 cut(s) 34, 94, 742
BstZ17I GTATAC 1 cut(s) 1189
Bsu15I ATCGAT 1 cut(s) 995
BsuI GTATCC 1 cut(s) 1062
BsuRI GGCC 3 cut(s) 137, 1250, 1294
BsuTUI ATCGAT 1 cut(s) 995
BtgI CCRYGG 1 cut(s) 426
BtgZI GCGATG 1 cut(s) 1248
BtsCI GGATG 3 cut(s) 553, 937, 1269
BtsI GCAGTG 1 cut(s) 489
BtsIMutI CAGTG 2 cut(s) 489, 1344
Cac8I GCNNGC 2 cut(s) 496, 1269
CfoI GCGC 1 cut(s) 524
Cfr13I GGNCC 2 cut(s) 985, 1249
ClaI ATCGAT 1 cut(s) 995
Csp6I GTAC 2 cut(s) 651, 817
CviAII CATG 6 cut(s) 247, 376, 427, 558, 1268, 1339
CviQI GTAC 2 cut(s) 651, 817
DdeI CTNAG 4 cut(s) 671, 705, 1161, 1217
DpnI GATC 7 cut(s) 36, 96, 174, 261, 600, 744, 1113
DpnII GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
DraI TTTAAA 1 cut(s) 196
EaeI YGGCCR 2 cut(s) 135, 1292
Eam1104I CTCTTC 3 cut(s) 273, 1167, 1383
EarI CTCTTC 3 cut(s) 273, 1167, 1383
EciI GGCGGA 1 cut(s) 99
Eco130I CCWWGG 1 cut(s) 426
Eco32I GATATC 1 cut(s) 1042
Eco47I GGWCC 1 cut(s) 985
Eco47III AGCGCT 1 cut(s) 523
Eco57I CTGAAG 2 cut(s) 489, 773
EcoO109I RGGNCCY 1 cut(s) 1249
EcoRV GATATC 1 cut(s) 1042
EcoT14I CCWWGG 1 cut(s) 426
EcoT22I ATGCAT 3 cut(s) 559, 937, 1269
ErhI CCWWGG 1 cut(s) 426
FaeI CATG 6 cut(s) 250, 379, 430, 561, 1271, 1342
FalI AAGNNNNNCTT 2 cut(s) 1362, 1394
FaqI GGGAC 2 cut(s) 138, 819
FatI CATG 6 cut(s) 246, 375, 426, 557, 1267, 1338
FauNDI CATATG 1 cut(s) 898
FbaI TGATCA 1 cut(s) 598
FblI GTMKAC 1 cut(s) 1188
Fnu4HI GCNGC 1 cut(s) 1374
FokI GGATG 3 cut(s) 560, 944, 1276
Fsp4HI GCNGC 1 cut(s) 1374
FspBI CTAG 3 cut(s) 75, 879, 962
GlaI GCGC 1 cut(s) 523
GluI GCNGC 1 cut(s) 1374
HaeII RGCGCY 1 cut(s) 525
HaeIII GGCC 3 cut(s) 137, 1250, 1294
HhaI GCGC 1 cut(s) 524
Hin1II CATG 6 cut(s) 250, 379, 430, 561, 1271, 1342
Hin6I GCGC 1 cut(s) 522
HinP1I GCGC 1 cut(s) 522
HinfI GANTC 6 cut(s) 315, 450, 664, 832, 997, 1349
HphI GGTGA 3 cut(s) 563, 1090, 1121
Hpy166II GTNNAC 3 cut(s) 622, 1189, 1201
Hpy188I TCNGA 4 cut(s) 70, 172, 184, 259
Hpy188III TCNNGA 9 cut(s) 44, 130, 155, 232, 704, 827, 1091, 1286, 1382
Hpy8I GTNNAC 3 cut(s) 622, 1189, 1201
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 5 cut(s) 577, 748, 922, 1129, 1312
HpyCH4III ACNGT 4 cut(s) 31, 215, 655, 1109
HpyCH4IV ACGT 2 cut(s) 202, 783
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
HpyF3I CTNAG 4 cut(s) 671, 705, 1161, 1217
HpySE526I ACGT 2 cut(s) 202, 783
Hsp92II CATG 6 cut(s) 250, 379, 430, 561, 1271, 1342
HspAI GCGC 1 cut(s) 522
Ksp22I TGATCA 1 cut(s) 598
Kzo9I GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
LguI GCTCTTC 1 cut(s) 1383
LmnI GCTCC 2 cut(s) 706, 895
Lsp1109I GCAGC 1 cut(s) 1385
LweI GCATC 7 cut(s) 49, 512, 544, 922, 944, 1001, 1254
MaeI CTAG 3 cut(s) 75, 879, 962
MaeII ACGT 2 cut(s) 202, 783
MaeIII GTNAC 1 cut(s) 11
MalI GATC 7 cut(s) 36, 96, 174, 261, 600, 744, 1113
MbiI CCGCTC 1 cut(s) 125
MboI GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
MboII GAAGA 9 cut(s) 15, 57, 104, 290, 659, 1073, 1113, 1184, 1370
MflI RGATCY 3 cut(s) 34, 94, 742
MlsI TGGCCA 1 cut(s) 1294
MluCI AATT 4 cut(s) 110, 322, 603, 684
MluNI TGGCCA 1 cut(s) 1294
MlyI GAGTC 3 cut(s) 309, 459, 841
Mox20I TGGCCA 1 cut(s) 1294
Mph1103I ATGCAT 3 cut(s) 559, 937, 1269
MscI TGGCCA 1 cut(s) 1294
MseI TTAA 7 cut(s) 195, 240, 302, 446, 518, 591, 732
Msp20I TGGCCA 1 cut(s) 1294
MspA1I CMGCKG 1 cut(s) 412
MspCI CTTAAG 1 cut(s) 517
MwoI GCNNNNNNNGC 1 cut(s) 500
NcoI CCATGG 1 cut(s) 426
NdeI CATATG 1 cut(s) 898
NdeII GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
NlaIII CATG 6 cut(s) 250, 379, 430, 561, 1271, 1342
NlaIV GGNNCC 1 cut(s) 744
NsiI ATGCAT 3 cut(s) 559, 937, 1269
NspI RCATGY 2 cut(s) 561, 1271
NspV TTCGAA 2 cut(s) 1059, 1099
PaeI GCATGC 1 cut(s) 1271
PciSI GCTCTTC 1 cut(s) 1383
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PfeI GAWTC 3 cut(s) 664, 997, 1349
PflMI CCANNNNNTGG 1 cut(s) 432
PkrI GCNGC 1 cut(s) 1375
PleI GAGTC 3 cut(s) 309, 458, 840
PpsI GAGTC 3 cut(s) 309, 458, 840
PshBI ATTAAT 1 cut(s) 591
PsiI TTATAA 1 cut(s) 792
PspN4I GGNNCC 1 cut(s) 744
PspPI GGNCC 2 cut(s) 985, 1249
PsrI GAACNNNNNNTAC 2 cut(s) 24, 56
PstI CTGCAG 1 cut(s) 496
PsuI RGATCY 3 cut(s) 34, 94, 742
RsaI GTAC 2 cut(s) 652, 818
RsaNI GTAC 2 cut(s) 651, 817
SapI GCTCTTC 1 cut(s) 1383
SaqAI TTAA 7 cut(s) 195, 240, 302, 446, 518, 591, 732
SatI GCNGC 1 cut(s) 1374
Sau3AI GATC 7 cut(s) 34, 94, 172, 259, 598, 742, 1111
Sau96I GGNCC 2 cut(s) 985, 1249
SchI GAGTC 3 cut(s) 309, 459, 841
SfaNI GCATC 7 cut(s) 49, 512, 544, 922, 944, 1001, 1254
SfcI CTRYAG 1 cut(s) 492
SfuI TTCGAA 2 cut(s) 1059, 1099
SinI GGWCC 1 cut(s) 985
SmlI CTYRAG 2 cut(s) 128, 517
SmoI CTYRAG 2 cut(s) 128, 517
SphI GCATGC 1 cut(s) 1271
Sse9I AATT 4 cut(s) 110, 322, 603, 684
SsiI CCGC 5 cut(s) 84, 123, 412, 1143, 1299
SspMI CTAG 3 cut(s) 75, 879, 962
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 4 cut(s) 31, 215, 655, 1109
TaiI ACGT 2 cut(s) 205, 786
TaqI TCGA 8 cut(s) 718, 995, 1047, 1059, 1099, 1114, 1257, 1335
TaqII GACCGA 1 cut(s) 71
TasI AATT 4 cut(s) 110, 322, 603, 684
TfiI GAWTC 3 cut(s) 664, 997, 1349
Tru1I TTAA 7 cut(s) 195, 240, 302, 446, 518, 591, 732
Tru9I TTAA 7 cut(s) 195, 240, 302, 446, 518, 591, 732
TscAI CASTG 2 cut(s) 496, 1351
TseI GCWGC 1 cut(s) 1373
TspDTI ATGAA 6 cut(s) 364, 596, 789, 915, 989, 1355
TspRI CASTG 2 cut(s) 496, 1351
Van91I CCANNNNNTGG 1 cut(s) 432
Vha464I CTTAAG 1 cut(s) 517
VpaK11BI GGWCC 1 cut(s) 985
VspI ATTAAT 1 cut(s) 591
XapI RAATTY 3 cut(s) 110, 322, 684
XceI RCATGY 2 cut(s) 561, 1271
XmiI GTMKAC 1 cut(s) 1188
XspI CTAG 3 cut(s) 75, 879, 962
Zsp2I ATGCAT 3 cut(s) 559, 937, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.