AT2G17160

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
N/A
Physical Location & Seq
Forward (+)
7472754 .. 7474012
1259 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17160.1

Sequence Viewer

Length: 288 bp
ATGGGTACAAAAGCTAGGAGACCAAACCCTGAGGCTCCTGTGAGGAGAAACGGAAAGTTTGTTACTGAGCTGATGAATCCAAATCTCAAGGGAAAGTTCTCAACAGAAGAAGCTTTCCTAGTTTTCAAACTCGCCTCTGAATGTTTGCAGTGCGAACATAGAAAAAGTCTCATCACAAAAGAGCTTGTTGCAACACTTAAAGCCTTGCAAACTAAACCACACATTCCAACTTCTGAAATGACAAAGCAGAATCTGGAGGCATCATCTTCAAGTCAAACTAAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

95

Amino Acids

10.6

Weight (kDa)

9.8

Isoelectric Point (pI)

57.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 7
AgsI TTSAA 2 cut(s) 127, 270
AluBI AGCT 4 cut(s) 14, 70, 113, 184
AluI AGCT 4 cut(s) 14, 70, 113, 184
Alw26I GTCTC 2 cut(s) 13, 173
AlwNI CAGNNNCTG 1 cut(s) 253
AxyI CCTNAGG 1 cut(s) 30
BcoDI GTCTC 2 cut(s) 13, 173
BfaI CTAG 2 cut(s) 15, 119
BmiI GGNNCC 1 cut(s) 36
BmsI GCATC 1 cut(s) 269
BpmI CTGGAG 1 cut(s) 275
BpuEI CTTGAG 1 cut(s) 71
BsaI GGTCTC 1 cut(s) 13
Bse21I CCTNAGG 1 cut(s) 30
BseMII CTCAG 2 cut(s) 21, 57
BseRI GAGGAG 1 cut(s) 58
BsmAI GTCTC 2 cut(s) 13, 173
Bso31I GGTCTC 1 cut(s) 13
BspCNI CTCAG 2 cut(s) 22, 58
BspLI GGNNCC 1 cut(s) 36
BspTNI GGTCTC 1 cut(s) 13
BstDEI CTNAG 2 cut(s) 30, 66
BstMAI GTCTC 2 cut(s) 13, 173
Bsu36I CCTNAGG 1 cut(s) 30
BtsI GCAGTG 1 cut(s) 155
BtsIMutI CAGTG 1 cut(s) 155
CaiI CAGNNNCTG 1 cut(s) 253
Csp6I GTAC 1 cut(s) 6
CviJI RGCY 6 cut(s) 14, 35, 70, 113, 184, 203
CviKI_1 RGCY 6 cut(s) 14, 35, 70, 113, 184, 203
CviQI GTAC 1 cut(s) 6
DdeI CTNAG 2 cut(s) 30, 66
Eco31I GGTCTC 1 cut(s) 13
Eco81I CCTNAGG 1 cut(s) 30
FaiI YATR 2 cut(s) 159, 286
FspBI CTAG 2 cut(s) 15, 119
GsuI CTGGAG 1 cut(s) 275
HindIII AAGCTT 1 cut(s) 111
HinfI GANTC 2 cut(s) 76, 250
Hpy188I TCNGA 2 cut(s) 139, 235
Hpy188III TCNNGA 1 cut(s) 254
HpyCH4V TGCA 3 cut(s) 148, 191, 208
HpyF3I CTNAG 2 cut(s) 30, 66
LmnI GCTCC 1 cut(s) 40
LpnPI CCDG 3 cut(s) 42, 51, 239
LweI GCATC 1 cut(s) 269
MaeI CTAG 2 cut(s) 15, 119
MaeIII GTNAC 1 cut(s) 61
MboII GAAGA 2 cut(s) 119, 258
MmeI TCCRAC 1 cut(s) 251
MnlI CCTC 4 cut(s) 25, 36, 145, 250
MseI TTAA 1 cut(s) 198
NlaIV GGNNCC 1 cut(s) 36
PfeI GAWTC 2 cut(s) 76, 250
PspN4I GGNNCC 1 cut(s) 36
PstNI CAGNNNCTG 1 cut(s) 253
RsaI GTAC 1 cut(s) 7
RsaNI GTAC 1 cut(s) 6
SaqAI TTAA 1 cut(s) 198
SetI ASST 4 cut(s) 16, 72, 115, 186
SfaNI GCATC 1 cut(s) 269
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
SspMI CTAG 2 cut(s) 15, 119
TfiI GAWTC 2 cut(s) 76, 250
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TscAI CASTG 1 cut(s) 155
TspDTI ATGAA 1 cut(s) 89
TspGWI ACGGA 1 cut(s) 66
TspRI CASTG 1 cut(s) 155
XspI CTAG 2 cut(s) 15, 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.