AT2G17170

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
N/A
Physical Location & Seq
Forward (+)
7474736 .. 7476438
1703 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17170.1

Sequence Viewer

Length: 987 bp
ATGGGTGGTTGTTGCTTCTCGACGCCTCTTGATAACAATCAACAACCTCCACAACAGCCACAGATTCCTCCCGGCGAACGCAAGAACGACGGATTCGTCAACTGGCCTGTCACAGAGTTCTTCCTCTCCGATATCACCACGGCGACCAATAACTTCAGTTCCGACGAGATCATATCAGAGAACGCAGAAGAATCTTCCAATGTTGTCTACAAAGGTTGTTTATTAGAGAATCTTGGCTTCGTAGCTGTCAAGAGATTCAAGAATACGCCTTGGGATGATCCTGACTACTTCACGGAAGACGCAAAAACAGCTGGGGAGCTAAAGCACAAGAGACTTGTCAAGTTGTTGGGATATTGCTGCGAGGAAGATGAAGGACTTCTTGTTGCAGAGTTTATGCCAAATGATACTCTTGCTAAGCGTTTATTCCAGGAGAAGAACATGGAATGGTCAATGAGGTTGCGAGTGGCGTATCATATAGTTGAAGCATTGGATTATTGCAATTCTGTACGTTTTGACGAGTACGATAATCTAAGTGCTTACACTGTTCTGTTTGATAAGGATGGTGATGCCTGTCTTTCTAGTTTCGGCTTGGTGAAAGAGATCATCCGTTACAATCGAAGAGAAGGAGGGAACGTGAGGACTGGGAATGTGACATACAGATTTGGTACTATCCTTGTGAATCTGCTAACTGGATTGCAAATTTCTCCGAGCCATGCTCCTGAGATGATCAATGGAAAGGATGTCACTGAGCTCATGGATCCAAATCTGAAGGGAAAGTTCTCTACAGAAGAAGCTACTATAGTTTTAAAACTCGCCTCTGAATGTTTGCAGTGGAAGGGTTATATAGAGAATGGCATCACTAAAAAGCTTGTTGCAACACTTAAAGCCTTGCAGGCTAAAAAAGAAATTTCATCTTCTGAAATGCATGAAGTAACAAAGCAGCACGATGTGGCATCATCTTCGAGTCAACAACAACTTCCACCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

328

Amino Acids

36.91

Weight (kDa)

5.04

Isoelectric Point (pI)

46.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 67 - 210 1.4e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 69 - 206 4.9e-14 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 95
AccI GTMKAC 1 cut(s) 207
AclWI GGATC 3 cut(s) 272, 752, 765
AcsI RAATTY 2 cut(s) 699, 906
AcuI CTGAAG 2 cut(s) 139, 788
AcyI GRCGYC 1 cut(s) 23
AdeI CACNNNGTG 1 cut(s) 949
AfaI GTAC 3 cut(s) 507, 521, 667
AgsI TTSAA 2 cut(s) 259, 482
AjnI CCWGG 1 cut(s) 426
AluBI AGCT 6 cut(s) 245, 311, 319, 751, 794, 868
AluI AGCT 6 cut(s) 245, 311, 319, 751, 794, 868
Alw21I GWGCWC 1 cut(s) 753
Alw26I GTCTC 1 cut(s) 325
AlwI GGATC 3 cut(s) 272, 752, 765
AoxI GGCC 1 cut(s) 104
ApeKI GCWGC 2 cut(s) 357, 940
ApoI RAATTY 2 cut(s) 699, 906
Asp700I GAANNNNTTC 1 cut(s) 375
AsuC2I CCSGG 1 cut(s) 72
AsuHPI GGTGA 3 cut(s) 127, 575, 604
BamHI GGATCC 1 cut(s) 757
BanII GRGCYC 1 cut(s) 753
BbsI GAAGAC 1 cut(s) 303
Bbv12I GWGCWC 1 cut(s) 753
BbvI GCAGC 2 cut(s) 344, 952
BccI CCATC 1 cut(s) 554
BceAI ACGGC 1 cut(s) 156
BcgI CGANNNNNNTGC 2 cut(s) 942, 976
BciT130I CCWGG 1 cut(s) 428
BclI TGATCA 1 cut(s) 726
BcnI CCSGG 1 cut(s) 72
BcoDI GTCTC 1 cut(s) 325
BfaI CTAG 1 cut(s) 579
BfmI CTRYAG 2 cut(s) 783, 798
BglI GCCNNNNNGGC 1 cut(s) 893
BisI GCNGC 2 cut(s) 358, 941
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 2 cut(s) 359, 942
Bme1390I CCNGG 2 cut(s) 72, 428
BmiI GGNNCC 1 cut(s) 759
BmrFI CCNGG 2 cut(s) 72, 428
BmrI ACTGGG 1 cut(s) 651
BmsI GCATC 3 cut(s) 556, 864, 962
BmuI ACTGGG 1 cut(s) 651
BpiI GAAGAC 1 cut(s) 303
BplI GAGNNNNNCTC 2 cut(s) 700, 732
Bpu1102I GCTNAGC 1 cut(s) 414
BpuMI CCSGG 1 cut(s) 72
BsaBI GATNNNNATC 2 cut(s) 36, 762
BsaHI GRCGYC 1 cut(s) 23
BsaJI CCNNGG 2 cut(s) 138, 269
BsaXI ACNNNNNCTCC 2 cut(s) 618, 648
Bse1I ACTGG 3 cut(s) 107, 646, 694
Bse8I GATNNNNATC 2 cut(s) 36, 762
BseBI CCWGG 1 cut(s) 428
BseDI CCNNGG 2 cut(s) 138, 269
BseGI GGATG 4 cut(s) 280, 565, 603, 745
BseJI GATNNNNATC 2 cut(s) 36, 762
BseMII CTCAG 2 cut(s) 711, 738
BseNI ACTGG 3 cut(s) 107, 646, 694
BseXI GCAGC 2 cut(s) 344, 952
BseYI CCCAGC 1 cut(s) 311
BshFI GGCC 1 cut(s) 106
BsiHKAI GWGCWC 1 cut(s) 753
BsiSI CCGG 1 cut(s) 72
BsmAI GTCTC 1 cut(s) 325
BsnI GGCC 1 cut(s) 106
Bsp1286I GDGCHC 1 cut(s) 753
Bsp143I GATC 5 cut(s) 168, 277, 600, 726, 757
Bsp1720I GCTNAGC 1 cut(s) 414
BspANI GGCC 1 cut(s) 106
BspCNI CTCAG 2 cut(s) 712, 739
BspLI GGNNCC 1 cut(s) 759
BspPI GGATC 3 cut(s) 272, 752, 765
BsrI ACTGG 3 cut(s) 107, 646, 694
BssECI CCNNGG 2 cut(s) 138, 269
BssMI GATC 5 cut(s) 168, 277, 600, 726, 757
BssNI GRCGYC 1 cut(s) 23
BssT1I CCWWGG 1 cut(s) 269
Bst2UI CCWGG 1 cut(s) 428
Bst4CI ACNGT 1 cut(s) 544
Bst6I CTCTTC 1 cut(s) 613
BstACI GRCGYC 1 cut(s) 23
BstC8I GCNNGC 1 cut(s) 894
BstDEI CTNAG 4 cut(s) 414, 530, 720, 747
BstDSI CCRYGG 1 cut(s) 138
BstF5I GGATG 4 cut(s) 280, 565, 603, 745
BstKTI GATC 5 cut(s) 171, 280, 603, 729, 760
BstMAI GTCTC 1 cut(s) 325
BstMBI GATC 5 cut(s) 168, 277, 600, 726, 757
BstMWI GCNNNNNNNGC 2 cut(s) 308, 893
BstNI CCWGG 1 cut(s) 428
BstSCI CCNGG 2 cut(s) 70, 426
BstSFI CTRYAG 2 cut(s) 783, 798
BstV1I GCAGC 2 cut(s) 344, 952
BstV2I GAAGAC 1 cut(s) 303
BstX2I RGATCY 1 cut(s) 757
BstYI RGATCY 1 cut(s) 757
BsuRI GGCC 1 cut(s) 106
BtgI CCRYGG 1 cut(s) 138
BtsCI GGATG 4 cut(s) 280, 565, 603, 745
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 3 cut(s) 540, 744, 836
Cac8I GCNNGC 1 cut(s) 894
CseI GACGC 2 cut(s) 31, 308
Csp6I GTAC 3 cut(s) 506, 520, 666
CviAII CATG 4 cut(s) 439, 713, 754, 926
CviQI GTAC 3 cut(s) 506, 520, 666
DdeI CTNAG 4 cut(s) 414, 530, 720, 747
DpnI GATC 5 cut(s) 170, 279, 602, 728, 759
DpnII GATC 5 cut(s) 168, 277, 600, 726, 757
DraI TTTAAA 1 cut(s) 807
DraIII CACNNNGTG 1 cut(s) 949
DrdI GACNNNNNNGTC 1 cut(s) 95
DseDI GACNNNNNNGTC 1 cut(s) 95
Eam1104I CTCTTC 1 cut(s) 613
EarI CTCTTC 1 cut(s) 613
Ecl136II GAGCTC 1 cut(s) 751
Eco130I CCWWGG 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 753
Eco32I GATATC 1 cut(s) 133
Eco53kI GAGCTC 1 cut(s) 751
Eco57I CTGAAG 2 cut(s) 139, 788
EcoICRI GAGCTC 1 cut(s) 751
EcoRII CCWGG 1 cut(s) 426
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 1 cut(s) 269
EcoT22I ATGCAT 1 cut(s) 927
EcoT38I GRGCYC 1 cut(s) 753
ErhI CCWWGG 1 cut(s) 269
FaeI CATG 4 cut(s) 442, 716, 757, 929
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FatI CATG 4 cut(s) 438, 712, 753, 925
FbaI TGATCA 1 cut(s) 726
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 2 cut(s) 358, 941
FokI GGATG 4 cut(s) 287, 572, 590, 752
FriOI GRGCYC 1 cut(s) 753
Fsp4HI GCNGC 2 cut(s) 358, 941
FspBI CTAG 1 cut(s) 579
GluI GCNGC 2 cut(s) 358, 941
GsaI CCCAGC 1 cut(s) 315
HaeIII GGCC 1 cut(s) 106
HapII CCGG 1 cut(s) 72
HgaI GACGC 2 cut(s) 31, 308
Hin1I GRCGYC 1 cut(s) 23
Hin1II CATG 4 cut(s) 442, 716, 757, 929
HincII GTYRAC 2 cut(s) 100, 968
HindII GTYRAC 2 cut(s) 100, 968
HindIII AAGCTT 1 cut(s) 866
HinfI GANTC 7 cut(s) 64, 93, 191, 229, 255, 679, 964
HpaII CCGG 1 cut(s) 72
HphI GGTGA 3 cut(s) 127, 575, 604
Hpy166II GTNNAC 3 cut(s) 100, 208, 968
Hpy188I TCNGA 7 cut(s) 130, 163, 178, 708, 768, 820, 919
Hpy188III TCNNGA 6 cut(s) 19, 29, 250, 259, 281, 719
Hpy8I GTNNAC 3 cut(s) 100, 208, 968
Hpy99I CGWCG 3 cut(s) 25, 92, 167
HpyAV CCTTC 4 cut(s) 365, 617, 763, 829
HpyCH4III ACNGT 1 cut(s) 544
HpyCH4IV ACGT 2 cut(s) 508, 633
HpyCH4V TGCA 7 cut(s) 386, 498, 697, 829, 875, 892, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 308, 893
HpyF3I CTNAG 4 cut(s) 414, 530, 720, 747
HpySE526I ACGT 2 cut(s) 508, 633
Hsp92I GRCGYC 1 cut(s) 23
Hsp92II CATG 4 cut(s) 442, 716, 757, 929
Ksp22I TGATCA 1 cut(s) 726
Kzo9I GATC 5 cut(s) 168, 277, 600, 726, 757
LmnI GCTCC 2 cut(s) 316, 721
Lsp1109I GCAGC 2 cut(s) 344, 952
LweI GCATC 3 cut(s) 556, 864, 962
MaeI CTAG 1 cut(s) 579
MaeII ACGT 2 cut(s) 508, 633
MaeIII GTNAC 5 cut(s) 109, 608, 649, 742, 931
MalI GATC 5 cut(s) 170, 279, 602, 728, 759
MboI GATC 5 cut(s) 168, 277, 600, 726, 757
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 1 cut(s) 753
MluCI AATT 3 cut(s) 499, 699, 906
MlyI GAGTC 1 cut(s) 973
MmeI TCCRAC 1 cut(s) 186
MnlI CCTC 9 cut(s) 36, 57, 78, 134, 355, 447, 620, 630, 826
Mph1103I ATGCAT 1 cut(s) 927
MroXI GAANNNNTTC 1 cut(s) 375
MseI TTAA 2 cut(s) 806, 882
MspA1I CMGCKG 1 cut(s) 311
MspI CCGG 1 cut(s) 72
MspR9I CCNGG 2 cut(s) 72, 428
MvaI CCWGG 1 cut(s) 428
MwoI GCNNNNNNNGC 2 cut(s) 308, 893
NciI CCSGG 1 cut(s) 72
NdeII GATC 5 cut(s) 168, 277, 600, 726, 757
NlaIII CATG 4 cut(s) 442, 716, 757, 929
NlaIV GGNNCC 1 cut(s) 759
NmuCI GTSAC 3 cut(s) 109, 649, 742
NsiI ATGCAT 1 cut(s) 927
PcsI WCGNNNNNNNCGW 1 cut(s) 93
PdmI GAANNNNTTC 1 cut(s) 375
PfeI GAWTC 6 cut(s) 64, 93, 191, 229, 255, 679
PfoI TCCNGGA 1 cut(s) 426
PkrI GCNGC 2 cut(s) 359, 942
PleI GAGTC 1 cut(s) 972
PpsI GAGTC 1 cut(s) 972
Psp124BI GAGCTC 1 cut(s) 753
Psp6I CCWGG 1 cut(s) 426
PspFI CCCAGC 1 cut(s) 311
PspGI CCWGG 1 cut(s) 426
PspN4I GGNNCC 1 cut(s) 759
PsuI RGATCY 1 cut(s) 757
PvuII CAGCTG 1 cut(s) 311
RsaI GTAC 3 cut(s) 507, 521, 667
RsaNI GTAC 3 cut(s) 506, 520, 666
SacI GAGCTC 1 cut(s) 753
SaqAI TTAA 2 cut(s) 806, 882
SatI GCNGC 2 cut(s) 358, 941
Sau3AI GATC 5 cut(s) 168, 277, 600, 726, 757
SchI GAGTC 1 cut(s) 973
ScrFI CCNGG 2 cut(s) 72, 428
SduI GDGCHC 1 cut(s) 753
SfaNI GCATC 3 cut(s) 556, 864, 962
SfcI CTRYAG 2 cut(s) 783, 798
Sse9I AATT 3 cut(s) 499, 699, 906
SspMI CTAG 1 cut(s) 579
SstI GAGCTC 1 cut(s) 753
StyD4I CCNGG 2 cut(s) 70, 426
StyI CCWWGG 1 cut(s) 269
TaaI ACNGT 1 cut(s) 544
TaiI ACGT 2 cut(s) 511, 636
TaqI TCGA 3 cut(s) 20, 616, 962
TasI AATT 3 cut(s) 499, 699, 906
TfiI GAWTC 6 cut(s) 64, 93, 191, 229, 255, 679
Tru1I TTAA 2 cut(s) 806, 882
Tru9I TTAA 2 cut(s) 806, 882
TscAI CASTG 3 cut(s) 547, 751, 836
TseFI GTSAC 3 cut(s) 109, 649, 742
TseI GCWGC 2 cut(s) 357, 940
Tsp45I GTSAC 3 cut(s) 109, 649, 742
TspDTI ATGAA 3 cut(s) 384, 900, 942
TspGWI ACGGA 3 cut(s) 105, 308, 596
TspRI CASTG 3 cut(s) 547, 751, 836
XapI RAATTY 2 cut(s) 699, 906
XmiI GTMKAC 1 cut(s) 207
XmnI GAANNNNTTC 1 cut(s) 375
XspI CTAG 1 cut(s) 579
Zsp2I ATGCAT 1 cut(s) 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.