Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

13092593 .. 13094677

Gene Structure 2085 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G30730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1017 bp

ATGTTTTTTTTTCTTGTCATCACATATGTAGCAAATCAAAAGAATCAAAAACCACAAGATCTTGCAAAGCCTAAGGAGATTCTTCCCATTATAGTTCCTTCCTTGTCAGTGGATGAGGTTAATGAACAGACTGACAATTTTGGACCAAATTCTCTGATTGGTGAGGGATCTTATGGAAGGGTATACTATGCAACTCTAAATGATGGAAAAGCAGTTGCTTTGAAGAAACTCGATCTTGCACCTGAAGATGAAACAAACACCGAGTTTTTAAGCCAGGTTTCCATGGTTTCAAGACTAAAGCATGAGAATCTCATTCAACTGGTCGGTTATTGTGTTGATGAAAACCTTCGTGTTCTTGCTTATGAGTTTGCAACAATGGGATCATTGCACGATATTCTGCATGGTAGGAAGGGAGTTCAAGATGCACTACCAGGTCCAACACTTGACTGGATAACAAGGGTGAAGATAGCCGTTGAGGCAGCTAGAGGTTTAGAATACCTTCATGAGAAGGTTCAGCCTCAAGTAATACATAGAGACATAAGATCTAGCAATATACTTCTTTTTGACGACTATCAAGCAAAAATTGCTGATTTTAATCTTTCAAATCAATCTCCTGATAATGCTGCTCGTTTACAATCTACAAGAGTTTTGGGCAGCTTTGGCTATTACTCTCCAGAATATGCTATGACTGGAGAGTTGACACATAAGAGTGATGTATATGGTTTTGGGGTTGTACTTCTAGAGCTCTTGACAGGGAGGAAACCAGTTGACCATACAATGCCGCGAGGCCAACAAAGTCTTGTAACTTGGGCTACACCGAAACTTAGTGAAGATACAGTAGAGGAGTGTGTTGATCCAAAGCTAAAGGGAGAATATTCTCCTAAATCAGTAGCTAAGCTAGCAGCGGTGGCAGCATTGTGTGTGCAATATGAATCTAATTGTAGACCAAAAATGAGTACAGTTGTGAAAGCTTTGCAACAACTTCTTATAGCGACAGGCTCAATACCGCAATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030054 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

338

Amino Acids

37.55

Weight (kDa)

5.71

Isoelectric Point (pI)

32.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	51 - 267	2.3e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	52 - 325	4.6e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	183, 943
AccII	CGCG	1 cut(s)	784
AciI	CCGC	3 cut(s)	782, 905, 1007
AclWI	GGATC	3 cut(s)	175, 388, 848
AcsI	RAATTY	1 cut(s)	148
AcuI	CTGAAG	1 cut(s)	264
AfaI	GTAC	2 cut(s)	735, 958
AgsI	TTSAA	5 cut(s)	223, 291, 317, 419, 603
AjnI	CCWGG	2 cut(s)	273, 430
AluBI	AGCT	7 cut(s)	482, 657, 745, 862, 893, 898, 971
AluI	AGCT	7 cut(s)	482, 657, 745, 862, 893, 898, 971
Alw21I	GWGCWC	1 cut(s)	747
Alw26I	GTCTC	1 cut(s)	528
AlwI	GGATC	3 cut(s)	175, 388, 848
AoxI	GGCC	1 cut(s)	787
ApeKI	GCWGC	5 cut(s)	479, 623, 654, 902, 911
ApoI	RAATTY	1 cut(s)	148
Asp700I	GAANNNNTTC	2 cut(s)	345, 498
AspS9I	GGNCC	2 cut(s)	143, 434
AsuHPI	GGTGA	2 cut(s)	173, 472
AsuNHI	GCTAGC	1 cut(s)	898
AvaII	GGWCC	2 cut(s)	143, 434
AxyI	CCTNAGG	1 cut(s)	72
BanII	GRGCYC	1 cut(s)	747
Bbv12I	GWGCWC	1 cut(s)	747
BbvI	GCAGC	5 cut(s)	491, 610, 666, 914, 923
BccI	CCATC	1 cut(s)	197
BceAI	ACGGC	1 cut(s)	455
BciT130I	CCWGG	2 cut(s)	275, 432
BcoDI	GTCTC	1 cut(s)	528
BfaI	CTAG	4 cut(s)	483, 546, 740, 899
BglI	GCCNNNNNGGC	1 cut(s)	476
BglII	AGATCT	2 cut(s)	58, 542
BisI	GCNGC	6 cut(s)	480, 624, 655, 782, 903, 912
BlpI	GCTNAGC	1 cut(s)	894
BlsI	GCNGC	6 cut(s)	481, 625, 656, 783, 904, 913
Bme1390I	CCNGG	2 cut(s)	275, 432
Bme18I	GGWCC	2 cut(s)	143, 434
BmgT120I	GGNCC	2 cut(s)	143, 434
BmrFI	CCNGG	2 cut(s)	275, 432
BmsI	GCATC	1 cut(s)	412
BmtI	GCTAGC	1 cut(s)	902
BpmI	CTGGAG	2 cut(s)	657, 711
Bpu1102I	GCTNAGC	1 cut(s)	894
BpuEI	CTTGAG	1 cut(s)	504
BsaBI	GATNNNNATC	1 cut(s)	594
BsaJI	CCNNGG	1 cut(s)	282
Bse1I	ACTGG	4 cut(s)	324, 452, 694, 764
Bse21I	CCTNAGG	1 cut(s)	72
Bse3DI	GCAATG	1 cut(s)	383
Bse8I	GATNNNNATC	1 cut(s)	594
BseBI	CCWGG	2 cut(s)	275, 432
BseDI	CCNNGG	1 cut(s)	282
BseGI	GGATG	1 cut(s)	118
BseJI	GATNNNNATC	1 cut(s)	594
BseMI	GCAATG	1 cut(s)	383
BseNI	ACTGG	4 cut(s)	324, 452, 694, 764
BseRI	GAGGAG	1 cut(s)	857
BseXI	GCAGC	5 cut(s)	491, 610, 666, 914, 923
Bsh1236I	CGCG	1 cut(s)	784
BshFI	GGCC	1 cut(s)	789
BsiHKAI	GWGCWC	1 cut(s)	747
BsmAI	GTCTC	1 cut(s)	528
BsnI	GGCC	1 cut(s)	789
Bsp1286I	GDGCHC	1 cut(s)	747
Bsp143I	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
Bsp1720I	GCTNAGC	1 cut(s)	894
Bsp19I	CCATGG	1 cut(s)	282
BspACI	CCGC	3 cut(s)	782, 905, 1007
BspANI	GGCC	1 cut(s)	789
BspFNI	CGCG	1 cut(s)	784
BspHI	TCATGA	1 cut(s)	502
BspOI	GCTAGC	1 cut(s)	902
BspPI	GGATC	3 cut(s)	175, 388, 848
BsrDI	GCAATG	1 cut(s)	383
BsrI	ACTGG	4 cut(s)	324, 452, 694, 764
BssECI	CCNNGG	1 cut(s)	282
BssMI	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
BssNAI	GTATAC	1 cut(s)	184
BssT1I	CCWWGG	1 cut(s)	282
Bst1107I	GTATAC	1 cut(s)	184
Bst2UI	CCWGG	2 cut(s)	275, 432
Bst4CI	ACNGT	2 cut(s)	838, 961
BstAPI	GCANNNNNTGC	1 cut(s)	584
BstC8I	GCNNGC	1 cut(s)	900
BstDEI	CTNAG	3 cut(s)	72, 824, 894
BstDSI	CCRYGG	1 cut(s)	282
BstF5I	GGATG	1 cut(s)	118
BstFNI	CGCG	1 cut(s)	784
BstKTI	GATC	6 cut(s)	61, 170, 235, 383, 545, 856
BstMAI	GTCTC	1 cut(s)	528
BstMBI	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
BstMWI	GCNNNNNNNGC	6 cut(s)	476, 584, 660, 899, 908, 911
BstNI	CCWGG	2 cut(s)	275, 432
BstSCI	CCNGG	2 cut(s)	273, 430
BstUI	CGCG	1 cut(s)	784
BstV1I	GCAGC	5 cut(s)	491, 610, 666, 914, 923
BstX2I	RGATCY	3 cut(s)	58, 167, 542
BstYI	RGATCY	3 cut(s)	58, 167, 542
BstZ17I	GTATAC	1 cut(s)	184
Bsu36I	CCTNAGG	1 cut(s)	72
BsuRI	GGCC	1 cut(s)	789
BtgI	CCRYGG	1 cut(s)	282
BtsCI	GGATG	1 cut(s)	118
BtsIMutI	CAGTG	1 cut(s)	114
Cac8I	GCNNGC	1 cut(s)	900
CciI	TCATGA	1 cut(s)	502
Cfr13I	GGNCC	2 cut(s)	143, 434
CsiI	ACCWGGT	1 cut(s)	430
Csp6I	GTAC	2 cut(s)	734, 957
CviAII	CATG	4 cut(s)	283, 302, 401, 503
CviQI	GTAC	2 cut(s)	734, 957
DdeI	CTNAG	3 cut(s)	72, 824, 894
DpnI	GATC	6 cut(s)	60, 169, 234, 382, 544, 855
DpnII	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
Ecl136II	GAGCTC	1 cut(s)	745
Eco130I	CCWWGG	1 cut(s)	282
Eco24I	GRGCYC	1 cut(s)	747
Eco47I	GGWCC	2 cut(s)	143, 434
Eco53kI	GAGCTC	1 cut(s)	745
Eco57I	CTGAAG	1 cut(s)	264
Eco81I	CCTNAGG	1 cut(s)	72
EcoICRI	GAGCTC	1 cut(s)	745
EcoRII	CCWGG	2 cut(s)	273, 430
EcoT14I	CCWWGG	1 cut(s)	282
EcoT38I	GRGCYC	1 cut(s)	747
ErhI	CCWWGG	1 cut(s)	282
FaeI	CATG	4 cut(s)	286, 305, 404, 506
FatI	CATG	4 cut(s)	282, 301, 400, 502
FauNDI	CATATG	1 cut(s)	25
FblI	GTMKAC	2 cut(s)	183, 943
Fnu4HI	GCNGC	6 cut(s)	480, 624, 655, 782, 903, 912
FokI	GGATG	1 cut(s)	125
FriOI	GRGCYC	1 cut(s)	747
Fsp4HI	GCNGC	6 cut(s)	480, 624, 655, 782, 903, 912
FspBI	CTAG	4 cut(s)	483, 546, 740, 899
GluI	GCNGC	6 cut(s)	480, 624, 655, 782, 903, 912
GsuI	CTGGAG	2 cut(s)	657, 711
HaeIII	GGCC	1 cut(s)	789
Hin1II	CATG	4 cut(s)	286, 305, 404, 506
HincII	GTYRAC	2 cut(s)	699, 769
HindII	GTYRAC	2 cut(s)	699, 769
HindIII	AAGCTT	1 cut(s)	969
HinfI	GANTC	4 cut(s)	43, 79, 307, 932
HphI	GGTGA	2 cut(s)	173, 472
Hpy166II	GTNNAC	5 cut(s)	184, 632, 699, 769, 944
Hpy188I	TCNGA	1 cut(s)	156
Hpy188III	TCNNGA	7 cut(s)	291, 419, 503, 614, 674, 740, 748
Hpy8I	GTNNAC	5 cut(s)	184, 632, 699, 769, 944
HpyAV	CCTTC	6 cut(s)	108, 171, 356, 403, 502, 509
HpyCH4III	ACNGT	2 cut(s)	838, 961
HpyCH4V	TGCA	9 cut(s)	65, 191, 239, 371, 388, 400, 425, 925, 976
HpyF10VI	GCNNNNNNNGC	6 cut(s)	476, 584, 660, 899, 908, 911
HpyF3I	CTNAG	3 cut(s)	72, 824, 894
Hsp92II	CATG	4 cut(s)	286, 305, 404, 506
Kzo9I	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
Lsp1109I	GCAGC	5 cut(s)	491, 610, 666, 914, 923
LweI	GCATC	1 cut(s)	412
MabI	ACCWGGT	1 cut(s)	430
MaeI	CTAG	4 cut(s)	483, 546, 740, 899
MaeIII	GTNAC	1 cut(s)	802
MalI	GATC	6 cut(s)	60, 169, 234, 382, 544, 855
MboI	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
MboII	GAAGA	5 cut(s)	74, 235, 257, 475, 842
MflI	RGATCY	3 cut(s)	58, 167, 542
MhlI	GDGCHC	1 cut(s)	747
MluCI	AATT	5 cut(s)	136, 148, 582, 937, 1010
MmeI	TCCRAC	1 cut(s)	461
MnlI	CCTC	8 cut(s)	109, 157, 469, 479, 528, 750, 779, 835
MroXI	GAANNNNTTC	2 cut(s)	345, 498
MseI	TTAA	3 cut(s)	120, 269, 594
MslI	CAYNNNNRTG	1 cut(s)	708
MspA1I	CMGCKG	1 cut(s)	905
MspR9I	CCNGG	2 cut(s)	275, 432
MvaI	CCWGG	2 cut(s)	275, 432
MvnI	CGCG	1 cut(s)	784
MwoI	GCNNNNNNNGC	6 cut(s)	476, 584, 660, 899, 908, 911
NcoI	CCATGG	1 cut(s)	282
NdeI	CATATG	1 cut(s)	25
NdeII	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
NheI	GCTAGC	1 cut(s)	898
NlaIII	CATG	4 cut(s)	286, 305, 404, 506
PagI	TCATGA	1 cut(s)	502
PdmI	GAANNNNTTC	2 cut(s)	345, 498
PfeI	GAWTC	4 cut(s)	43, 79, 307, 932
PkrI	GCNGC	6 cut(s)	481, 625, 656, 783, 904, 913
Psp124BI	GAGCTC	1 cut(s)	747
Psp6I	CCWGG	2 cut(s)	273, 430
PspGI	CCWGG	2 cut(s)	273, 430
PspPI	GGNCC	2 cut(s)	143, 434
PsuI	RGATCY	3 cut(s)	58, 167, 542
RsaI	GTAC	2 cut(s)	735, 958
RsaNI	GTAC	2 cut(s)	734, 957
RseI	CAYNNNNRTG	1 cut(s)	708
SacI	GAGCTC	1 cut(s)	747
SaqAI	TTAA	3 cut(s)	120, 269, 594
SatI	GCNGC	6 cut(s)	480, 624, 655, 782, 903, 912
Sau3AI	GATC	6 cut(s)	58, 167, 232, 380, 542, 853
Sau96I	GGNCC	2 cut(s)	143, 434
ScrFI	CCNGG	2 cut(s)	275, 432
SduI	GDGCHC	1 cut(s)	747
SexAI	ACCWGGT	1 cut(s)	430
SfaNI	GCATC	1 cut(s)	412
SinI	GGWCC	2 cut(s)	143, 434
SmiMI	CAYNNNNRTG	1 cut(s)	708
SmlI	CTYRAG	1 cut(s)	519
SmoI	CTYRAG	1 cut(s)	519
Sse9I	AATT	5 cut(s)	136, 148, 582, 937, 1010
SsiI	CCGC	3 cut(s)	782, 905, 1007
SspI	AATATT	1 cut(s)	875
SspMI	CTAG	4 cut(s)	483, 546, 740, 899
SstI	GAGCTC	1 cut(s)	747
StyD4I	CCNGG	2 cut(s)	273, 430
StyI	CCWWGG	1 cut(s)	282
TaaI	ACNGT	2 cut(s)	838, 961
TaqI	TCGA	1 cut(s)	231
TasI	AATT	5 cut(s)	136, 148, 582, 937, 1010
TatI	WGTACW	2 cut(s)	733, 956
TauI	GCSGC	1 cut(s)	784
TfiI	GAWTC	4 cut(s)	43, 79, 307, 932
Tru1I	TTAA	3 cut(s)	120, 269, 594
Tru9I	TTAA	3 cut(s)	120, 269, 594
TscAI	CASTG	1 cut(s)	114
TseI	GCWGC	5 cut(s)	479, 623, 654, 902, 911
TspDTI	ATGAA	5 cut(s)	138, 264, 354, 491, 945
TspRI	CASTG	1 cut(s)	114
VpaK11BI	GGWCC	2 cut(s)	143, 434
XapI	RAATTY	1 cut(s)	148
XbaI	TCTAGA	1 cut(s)	739
XcmI	CCANNNNNNNNNTGG	1 cut(s)	444
XmiI	GTMKAC	2 cut(s)	183, 943
XmnI	GAANNNNTTC	2 cut(s)	345, 498
XspI	CTAG	4 cut(s)	483, 546, 740, 899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.