AT3G21450
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
N/A
Physical Location & Seq
Reverse (-)
7553965 .. 7555236
1272 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G21450.1

Sequence Viewer

Length: 813 bp
ATGGAGGAATTAAGGCAAGCAACGAACAATTTTGACATGGATAATACTATTGGGCATGGAAGTCACGGAACAGTTTACACTGGGCTGATCAAGGACATGCCCGTTGTGATCAAAAGGGAGTGGTGTAGTCCCCAACCTAGATTCTTGGATGAGGTACACACAAACAAAAAATTGGTTTCTTACATCCAACATAAAAATTTGGTTAATCTGCTCGGTTATTGTTGCGACGACGAGAACCAATCGCTCGTCTTTGAGTATATGGTCAACGGTAGCGTCCGAGATTATCTAGAGTCTAGCGACTTAACGTTCAAGAAAAGAATATCTATAGCTCTTGATGCAGCCAAAGGGTTACTACACTTGCACAACTTAGATCCTCCAGTACAACACAAGAGATTTACGGCGAGTAAAGTTTTGCTCGATGCCAACCTCAATGCCAAGGTATCAGATGGGGCAATGTTGGGACTGCTTCAAGCAAGTGATATTCATCTCGCTAATCCAAGAGGTGGTTCAGAGGAGACAATTGATGTGTATAGCTTCGGGTTGTTCCTTCTAGAGCTTATCACCTGTCAAAACCCTGGACTGTTACAATCAGACTATGAAGTTTTACAATGGAATATACCTGCAGAAACATTCACGAGACCATCGTTCCAAGCTTATCTGATAATTACGTCGGAATGCTTGGAATATCCCCCGATAAATCGCCCAAAGATGGATGTGGTCGTGACCGAGCTTGAGACGATTTACCTTAATGTCATCAGTGAGAACCATGAGGTTTCTCTAGGAAGTGAGCTTTTTAACATAACCATTGAGTAA
Functional Annotation

Protein Analysis

270

Amino Acids

30.49

Weight (kDa)

4.96

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 13 - 158 3.6e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 13 - 149 3.8e-11 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 628
AccB7I CCANNNNNTGG 1 cut(s) 503
AclI AACGTT 1 cut(s) 305
AclWI GGATC 1 cut(s) 365
AcsI RAATTY 1 cut(s) 196
AfaI GTAC 2 cut(s) 156, 381
AfiI CCNNNNNNNGG 2 cut(s) 503, 709
AgsI TTSAA 2 cut(s) 310, 470
AjnI CCWGG 1 cut(s) 574
AjuI GAANNNNNNNTTGG 2 cut(s) 490, 522
AluBI AGCT 6 cut(s) 329, 534, 556, 653, 730, 790
AluI AGCT 6 cut(s) 329, 534, 556, 653, 730, 790
Alw26I GTCTC 3 cut(s) 509, 631, 728
AlwI GGATC 1 cut(s) 365
ApeKI GCWGC 1 cut(s) 338
ApoI RAATTY 1 cut(s) 196
AsuHPI GGTGA 1 cut(s) 553
BauI CACGAG 1 cut(s) 634
BbvI GCAGC 1 cut(s) 350
BccI CCATC 3 cut(s) 440, 649, 703
BceAI ACGGC 1 cut(s) 414
BciT130I CCWGG 1 cut(s) 576
BclI TGATCA 2 cut(s) 87, 108
BcoDI GTCTC 3 cut(s) 509, 631, 728
BfaI CTAG 5 cut(s) 138, 287, 294, 551, 779
BfmI CTRYAG 2 cut(s) 324, 621
BfuAI ACCTGC 1 cut(s) 628
BisI GCNGC 1 cut(s) 339
BlsI GCNGC 1 cut(s) 340
Bme1390I CCNGG 1 cut(s) 576
BmrFI CCNGG 1 cut(s) 576
BmrI ACTGGG 1 cut(s) 90
BmsI GCATC 2 cut(s) 325, 409
BmuI ACTGGG 1 cut(s) 90
BpmI CTGGAG 1 cut(s) 360
BpuEI CTTGAG 1 cut(s) 752
BsaBI GATNNNNATC 1 cut(s) 483
BsaI GGTCTC 1 cut(s) 631
BsaJI CCNNGG 2 cut(s) 435, 574
Bsc4I CCNNNNNNNGG 2 cut(s) 503, 709
Bse1I ACTGG 2 cut(s) 85, 377
Bse3DI GCAATG 1 cut(s) 459
Bse8I GATNNNNATC 1 cut(s) 483
BseBI CCWGG 1 cut(s) 576
BseDI CCNNGG 2 cut(s) 435, 574
BseGI GGATG 3 cut(s) 154, 183, 718
BseJI GATNNNNATC 1 cut(s) 483
BseLI CCNNNNNNNGG 2 cut(s) 503, 709
BseMI GCAATG 1 cut(s) 459
BseNI ACTGG 2 cut(s) 85, 377
BseRI GAGGAG 1 cut(s) 527
BseXI GCAGC 1 cut(s) 350
BslFI GGGAC 2 cut(s) 114, 474
BslI CCNNNNNNNGG 2 cut(s) 503, 709
BsmAI GTCTC 3 cut(s) 509, 631, 728
BsmBI CGTCTC 1 cut(s) 728
BsmFI GGGAC 2 cut(s) 114, 474
BsmI GAATGC 1 cut(s) 680
Bso31I GGTCTC 1 cut(s) 631
Bsp143I GATC 3 cut(s) 87, 108, 370
BspMAI CTGCAG 1 cut(s) 625
BspMI ACCTGC 1 cut(s) 628
BspPI GGATC 1 cut(s) 365
BspTNI GGTCTC 1 cut(s) 631
BsrDI GCAATG 1 cut(s) 459
BsrI ACTGG 2 cut(s) 85, 377
BssECI CCNNGG 2 cut(s) 435, 574
BssMI GATC 3 cut(s) 87, 108, 370
BssSI CACGAG 1 cut(s) 634
BssT1I CCWWGG 1 cut(s) 435
Bst2BI CACGAG 1 cut(s) 634
Bst2UI CCWGG 1 cut(s) 576
Bst4CI ACNGT 3 cut(s) 73, 269, 582
BstC8I GCNNGC 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 367
BstF5I GGATG 3 cut(s) 154, 183, 718
BstKTI GATC 3 cut(s) 90, 111, 373
BstMAI GTCTC 3 cut(s) 509, 631, 728
BstMBI GATC 3 cut(s) 87, 108, 370
BstMWI GCNNNNNNNGC 1 cut(s) 335
BstNI CCWGG 1 cut(s) 576
BstNSI RCATGY 1 cut(s) 100
BstSCI CCNGG 1 cut(s) 574
BstSFI CTRYAG 2 cut(s) 324, 621
BstV1I GCAGC 1 cut(s) 350
BstX2I RGATCY 1 cut(s) 370
BstYI RGATCY 1 cut(s) 370
BtsCI GGATG 3 cut(s) 154, 183, 718
BtsIMutI CAGTG 2 cut(s) 78, 763
BveI ACCTGC 1 cut(s) 628
Cac8I GCNNGC 1 cut(s) 18
CseI GACGC 1 cut(s) 262
Csp6I GTAC 2 cut(s) 155, 380
CviAII CATG 4 cut(s) 37, 56, 97, 767
CviJI RGCY 8 cut(s) 85, 329, 341, 534, 556, 653, 730, 790
CviKI_1 RGCY 8 cut(s) 85, 329, 341, 534, 556, 653, 730, 790
CviQI GTAC 2 cut(s) 155, 380
DdeI CTNAG 1 cut(s) 367
DpnI GATC 3 cut(s) 89, 110, 372
DpnII GATC 3 cut(s) 87, 108, 370
Eco130I CCWWGG 1 cut(s) 435
Eco31I GGTCTC 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 574
EcoT14I CCWWGG 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 435
Esp3I CGTCTC 1 cut(s) 728
FaeI CATG 4 cut(s) 40, 59, 100, 770
FaqI GGGAC 2 cut(s) 114, 474
FatI CATG 4 cut(s) 36, 55, 96, 766
FbaI TGATCA 2 cut(s) 87, 108
Fnu4HI GCNGC 1 cut(s) 339
FokI GGATG 3 cut(s) 161, 170, 725
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 5 cut(s) 138, 287, 294, 551, 779
GluI GCNGC 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 360
HgaI GACGC 1 cut(s) 262
Hin1II CATG 4 cut(s) 40, 59, 100, 770
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HindIII AAGCTT 1 cut(s) 651
HinfI GANTC 2 cut(s) 141, 290
HphI GGTGA 1 cut(s) 553
Hpy166II GTNNAC 3 cut(s) 76, 157, 265
Hpy188I TCNGA 6 cut(s) 278, 445, 511, 592, 660, 673
Hpy188III TCNNGA 6 cut(s) 287, 310, 332, 551, 634, 721
Hpy8I GTNNAC 3 cut(s) 76, 157, 265
Hpy99I CGWCG 3 cut(s) 230, 233, 673
HpyAV CCTTC 1 cut(s) 557
HpyCH4III ACNGT 3 cut(s) 73, 269, 582
HpyCH4IV ACGT 2 cut(s) 305, 668
HpyCH4V TGCA 3 cut(s) 338, 361, 623
HpyF10VI GCNNNNNNNGC 1 cut(s) 335
HpyF3I CTNAG 1 cut(s) 367
HpySE526I ACGT 2 cut(s) 305, 668
Hsp92II CATG 4 cut(s) 40, 59, 100, 770
Ksp22I TGATCA 2 cut(s) 87, 108
Kzo9I GATC 3 cut(s) 87, 108, 370
LpnPI CCDG 6 cut(s) 66, 390, 561, 577, 588, 633
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 2 cut(s) 325, 409
MaeI CTAG 5 cut(s) 138, 287, 294, 551, 779
MaeII ACGT 2 cut(s) 305, 668
MaeIII GTNAC 4 cut(s) 62, 348, 582, 721
MalI GATC 3 cut(s) 89, 110, 372
MboI GATC 3 cut(s) 87, 108, 370
MfeI CAATTG 1 cut(s) 519
MflI RGATCY 1 cut(s) 370
MluCI AATT 6 cut(s) 8, 28, 170, 196, 519, 663
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 2 cut(s) 211, 651
MnlI CCTC 6 cut(s) 145, 384, 437, 494, 505, 763
MseI TTAA 5 cut(s) 11, 204, 302, 747, 795
MspR9I CCNGG 1 cut(s) 576
MunI CAATTG 1 cut(s) 519
Mva1269I GAATGC 1 cut(s) 680
MvaI CCWGG 1 cut(s) 576
MwoI GCNNNNNNNGC 1 cut(s) 335
NdeII GATC 3 cut(s) 87, 108, 370
NlaIII CATG 4 cut(s) 40, 59, 100, 770
NmuCI GTSAC 2 cut(s) 62, 721
NspI RCATGY 1 cut(s) 100
PcsI WCGNNNNNNNCGW 1 cut(s) 641
PctI GAATGC 1 cut(s) 680
PfeI GAWTC 1 cut(s) 141
PflMI CCANNNNNTGG 1 cut(s) 503
PkrI GCNGC 1 cut(s) 340
PleI GAGTC 1 cut(s) 298
PpsI GAGTC 1 cut(s) 298
Psp1406I AACGTT 1 cut(s) 305
Psp6I CCWGG 1 cut(s) 574
PspGI CCWGG 1 cut(s) 574
PstI CTGCAG 1 cut(s) 625
PsuI RGATCY 1 cut(s) 370
RsaI GTAC 2 cut(s) 156, 381
RsaNI GTAC 2 cut(s) 155, 380
SaqAI TTAA 5 cut(s) 11, 204, 302, 747, 795
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 3 cut(s) 87, 108, 370
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 1 cut(s) 576
SfaNI GCATC 2 cut(s) 325, 409
SfcI CTRYAG 2 cut(s) 324, 621
SmlI CTYRAG 1 cut(s) 731
SmoI CTYRAG 1 cut(s) 731
Sse9I AATT 6 cut(s) 8, 28, 170, 196, 519, 663
SspMI CTAG 5 cut(s) 138, 287, 294, 551, 779
StyD4I CCNGG 1 cut(s) 574
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 3 cut(s) 73, 269, 582
TaiI ACGT 2 cut(s) 308, 671
TaqI TCGA 1 cut(s) 417
TaqII GACCGA 1 cut(s) 740
TasI AATT 6 cut(s) 8, 28, 170, 196, 519, 663
TatI WGTACW 1 cut(s) 379
TfiI GAWTC 1 cut(s) 141
Tru1I TTAA 5 cut(s) 11, 204, 302, 747, 795
Tru9I TTAA 5 cut(s) 11, 204, 302, 747, 795
TscAI CASTG 2 cut(s) 85, 763
TseFI GTSAC 2 cut(s) 62, 721
TseI GCWGC 1 cut(s) 338
Tsp45I GTSAC 2 cut(s) 62, 721
TspDTI ATGAA 2 cut(s) 473, 612
TspGWI ACGGA 1 cut(s) 81
TspRI CASTG 2 cut(s) 85, 763
Van91I CCANNNNNTGG 1 cut(s) 503
XapI RAATTY 1 cut(s) 196
XbaI TCTAGA 2 cut(s) 286, 550
XceI RCATGY 1 cut(s) 100
XspI CTAG 5 cut(s) 138, 287, 294, 551, 779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.