Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

9936582 .. 9939305

Gene Structure 2724 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G26940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGTTAGTTGCTTGTGTTTTCGTCCCAGTCGGAAAACGAAGCTCAAAGACAAATCTCATAAGAGATCCATACGTAACCAGACATCCTCCTCTTCTGCCCAACCAGCTGGAACAGCAAAAGAAGTAGATTCGTCAAGTTCACAAACCGTAGTGCAAGATTCTTCTAGATACAGATGTCAGATTTTCTCATACAGAGAACTCGCCATCGCGACTAACAGCTTCAGGAATGAATCTTTGATCGGAAGAGGTGGATTTGGAACTGTGTATAAAGGAAGGCTAAGCACTGGACAGAACATAGCTGTTAAAATGCTTGATCAGTCTGGTATTCAAGGAGACAAAGAGTTTCTTGTGGAAGTCCTAATGCTCTCGCTCTTGCACCACCGAAACCTAGTGCATTTGTTCGGTTATTGTGCTGAAGGCGATCAAAGACTCGTTGTCTATGAATACATGCCTCTTGGATCTGTAGAAGATCATCTCTACGATCTTAGCGAGGGTCAAGAGGCTTTAGATTGGAAGACAAGGATGAAGATAGCTCTAGGAGCGGCTAAAGGGTTAGCGTTTCTTCACAACGAAGCACAACCTCCTGTGATATACAGAGATTTGAAAACTTCAAACATATTGTTGGATCATGACTATAAACCTAAGCTCTCAGATTTTGGACTTGCAAAGTTTGGTCCAAGTGATGATATGTCTCATGTCTCTACTAGAGTTATGGGAACTCATGGGTATTGTGCACCAGAGTACGCGAACACCGGGAAGTTGACGCTGAAATCTGATATTTATAGCTTTGGAGTTGTGCTGCTGGAGCTTATCAGTGGACGCAAAGCTCTTATGCCCTCATCCGAATGCGTTGGTAATCAAAGTCGCTATCTTGTGCATTGGGCACGACCGTTGTTCTTGAATGGCAGAATAAGGCAGATTGTAGATCCAAGGTTAGCAAGAAAAGGCGGTTTTTCGAATATACTTCTTTATAGAGGTATTGAAGTGGCCTTTCTGTGCCTAGCAGAAGAAGCAAACGCTAGACCATCGATCAGCCAAGTCGTGGAGTGTCTTAAGTATATCATTGATCACACAATTAGGAAGGAAAGGAGAACTAGGCGTAGACTACTAGGAGGAAATAAGGATGGGGCGGGGACATCGAGGTCACCGGATGAGACAATGATGAGGATGTTAGAAGAAGAAGAAGAATACGTAACTAGTGAAGAAGCTATTGAGAGAAGGAGGGTAATCGTGGATGATGCTCGTACTTGGGCCGGTATGAATAGGAGAGGGGCTACGCCACCAACTCCGACTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002221 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002757 GO:0002758 GO:0002764 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009814 GO:0009816 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0031347 GO:0031349 GO:0036211 GO:0038023 GO:0040007 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1900457 GO:1900459 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

432

Amino Acids

48.51

Weight (kDa)

9.18

Isoelectric Point (pI)

50.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	75 - 279	2.6e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	77 - 275	7.2e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1141
AccB7I	CCANNNNNTGG	1 cut(s)	1042
AccBSI	CCGCTC	1 cut(s)	542
AccI	GTMKAC	1 cut(s)	1102
AccII	CGCG	2 cut(s)	209, 746
AciI	CCGC	3 cut(s)	542, 948, 1130
AclWI	GGATC	4 cut(s)	60, 466, 633, 920
AcuI	CTGAAG	2 cut(s)	205, 435
AfaI	GTAC	2 cut(s)	743, 1246
AfiI	CCNNNNNNNGG	1 cut(s)	1042
AflII	CTTAAG	1 cut(s)	1052
AgsI	TTSAA	5 cut(s)	329, 604, 612, 901, 983
AhdI	GACNNNNNGTC	1 cut(s)	434
AhlI	ACTAGT	1 cut(s)	1196
Alw21I	GWGCWC	1 cut(s)	736
Alw26I	GTCTC	4 cut(s)	327, 696, 703, 1148
Alw44I	GTGCAC	1 cut(s)	732
AlwI	GGATC	4 cut(s)	60, 466, 633, 920
AoxI	GGCC	2 cut(s)	987, 1251
ApaLI	GTGCAC	1 cut(s)	732
ApeKI	GCWGC	1 cut(s)	799
AspS9I	GGNCC	2 cut(s)	674, 1251
AsuC2I	CCSGG	1 cut(s)	754
AsuHPI	GGTGA	1 cut(s)	1137
AsuII	TTCGAA	1 cut(s)	956
AvaII	GGWCC	1 cut(s)	674
BaeGI	GKGCMC	2 cut(s)	736, 886
BaeI	ACNNNNGTAYC	2 cut(s)	160, 193
BbsI	GAAGAC	1 cut(s)	521
Bbv12I	GWGCWC	1 cut(s)	736
BbvI	GCAGC	1 cut(s)	786
BccI	CCATC	3 cut(s)	212, 1033, 1118
BclI	TGATCA	2 cut(s)	313, 1066
BcnI	CCSGG	1 cut(s)	754
BcoDI	GTCTC	4 cut(s)	327, 696, 703, 1148
BcuI	ACTAGT	1 cut(s)	1196
BfaI	CTAG	9 cut(s)	165, 389, 536, 705, 1001, 1020, 1095, 1109, 1197
BfmI	CTRYAG	1 cut(s)	462
BfrI	CTTAAG	1 cut(s)	1052
BisI	GCNGC	2 cut(s)	543, 800
BlpI	GCTNAGC	1 cut(s)	278
BlsI	GCNGC	2 cut(s)	544, 801
Bme1390I	CCNGG	1 cut(s)	754
Bme18I	GGWCC	1 cut(s)	674
BmeRI	GACNNNNNGTC	1 cut(s)	434
BmgT120I	GGNCC	2 cut(s)	674, 1251
BmrFI	CCNGG	1 cut(s)	754
BmrI	ACTGGG	1 cut(s)	21
BmsI	GCATC	1 cut(s)	1228
BmuI	ACTGGG	1 cut(s)	21
BpiI	GAAGAC	1 cut(s)	521
BpmI	CTGGAG	1 cut(s)	824
Bpu10I	CCTNAGC	1 cut(s)	642
Bpu1102I	GCTNAGC	1 cut(s)	278
Bpu14I	TTCGAA	1 cut(s)	956
BpuMI	CCSGG	1 cut(s)	754
Bsa29I	ATCGAT	1 cut(s)	1028
BsaAI	YACGTR	2 cut(s)	74, 1192
BsaJI	CCNNGG	1 cut(s)	929
BsaWI	WCCGGW	1 cut(s)	1147
BsaXI	ACNNNNNCTCC	1 cut(s)	1276
Bsc4I	CCNNNNNNNGG	1 cut(s)	1042
Bse118I	RCCGGY	1 cut(s)	1253
Bse1I	ACTGG	2 cut(s)	27, 289
BseCI	ATCGAT	1 cut(s)	1028
BseDI	CCNNGG	1 cut(s)	929
BseGI	GGATG	7 cut(s)	83, 528, 839, 1129, 1156, 1173, 1240
BseLI	CCNNNNNNNGG	1 cut(s)	1042
BseMII	CTCAG	1 cut(s)	663
BseNI	ACTGG	2 cut(s)	27, 289
BseRI	GAGGAG	1 cut(s)	79
BseSI	GKGCMC	2 cut(s)	736, 886
BseXI	GCAGC	1 cut(s)	786
Bsh1236I	CGCG	2 cut(s)	209, 746
Bsh1285I	CGRYCG	1 cut(s)	890
BshFI	GGCC	2 cut(s)	989, 1253
BshVI	ATCGAT	1 cut(s)	1028
BsiEI	CGRYCG	1 cut(s)	890
BsiHKAI	GWGCWC	1 cut(s)	736
BsiSI	CCGG	3 cut(s)	753, 1148, 1254
BslFI	GGGAC	2 cut(s)	9, 1147
BslI	CCNNNNNNNGG	1 cut(s)	1042
BsmAI	GTCTC	4 cut(s)	327, 696, 703, 1148
BsmFI	GGGAC	2 cut(s)	9, 1147
BsmI	GAATGC	1 cut(s)	851
BsnI	GGCC	2 cut(s)	989, 1253
Bsp119I	TTCGAA	1 cut(s)	956
Bsp1286I	GDGCHC	2 cut(s)	736, 886
Bsp1720I	GCTNAGC	1 cut(s)	278
Bsp68I	TCGCGA	1 cut(s)	209
BspACI	CCGC	3 cut(s)	542, 948, 1130
BspANI	GGCC	2 cut(s)	989, 1253
BspCNI	CTCAG	1 cut(s)	662
BspDI	ATCGAT	1 cut(s)	1028
BspFNI	CGCG	2 cut(s)	209, 746
BspHI	TCATGA	1 cut(s)	628
BspPI	GGATC	4 cut(s)	60, 466, 633, 920
BspT104I	TTCGAA	1 cut(s)	956
BspTI	CTTAAG	1 cut(s)	1052
BsrBI	CCGCTC	1 cut(s)	542
BsrFI	RCCGGY	1 cut(s)	1253
BsrI	ACTGG	2 cut(s)	27, 289
BssAI	RCCGGY	1 cut(s)	1253
BssECI	CCNNGG	1 cut(s)	929
BssT1I	CCWWGG	1 cut(s)	929
Bst4CI	ACNGT	3 cut(s)	148, 262, 891
Bst6I	CTCTTC	2 cut(s)	97, 238
BstAFI	CTTAAG	1 cut(s)	1052
BstBAI	YACGTR	2 cut(s)	74, 1192
BstBI	TTCGAA	1 cut(s)	956
BstDEI	CTNAG	4 cut(s)	278, 485, 642, 649
BstEII	GGTNACC	1 cut(s)	1143
BstF5I	GGATG	7 cut(s)	83, 528, 839, 1129, 1156, 1173, 1240
BstFNI	CGCG	2 cut(s)	209, 746
BstMAI	GTCTC	4 cut(s)	327, 696, 703, 1148
BstMCI	CGRYCG	1 cut(s)	890
BstMWI	GCNNNNNNNGC	5 cut(s)	104, 113, 539, 805, 1010
BstNSI	RCATGY	1 cut(s)	451
BstPI	GGTNACC	1 cut(s)	1143
BstSCI	CCNGG	1 cut(s)	752
BstSFI	CTRYAG	1 cut(s)	462
BstSLI	GKGCMC	2 cut(s)	736, 886
BstSNI	TACGTA	2 cut(s)	74, 1192
BstUI	CGCG	2 cut(s)	209, 746
BstV1I	GCAGC	1 cut(s)	786
BstV2I	GAAGAC	1 cut(s)	521
BstX2I	RGATCY	3 cut(s)	65, 458, 925
BstXI	CCANNNNNNTGG	1 cut(s)	107
BstYI	RGATCY	3 cut(s)	65, 458, 925
Bsu15I	ATCGAT	1 cut(s)	1028
BsuRI	GGCC	2 cut(s)	989, 1253
BsuTUI	ATCGAT	1 cut(s)	1028
BtgZI	GCGATG	1 cut(s)	190
BtsCI	GGATG	7 cut(s)	83, 528, 839, 1129, 1156, 1173, 1240
BtsIMutI	CAGTG	2 cut(s)	282, 820
BtuMI	TCGCGA	1 cut(s)	209
CciI	TCATGA	1 cut(s)	628
Cfr10I	RCCGGY	1 cut(s)	1253
Cfr13I	GGNCC	2 cut(s)	674, 1251
ClaI	ATCGAT	1 cut(s)	1028
CseI	GACGC	2 cut(s)	772, 828
Csp6I	GTAC	2 cut(s)	742, 1245
CviAII	CATG	5 cut(s)	448, 629, 695, 722, 1296
CviQI	GTAC	2 cut(s)	742, 1245
DdeI	CTNAG	4 cut(s)	278, 485, 642, 649
DrdI	GACNNNNNNGTC	1 cut(s)	1141
DriI	GACNNNNNGTC	1 cut(s)	434
DseDI	GACNNNNNNGTC	1 cut(s)	1141
Eam1104I	CTCTTC	2 cut(s)	97, 238
Eam1105I	GACNNNNNGTC	1 cut(s)	434
EarI	CTCTTC	2 cut(s)	97, 238
Eco105I	TACGTA	2 cut(s)	74, 1192
Eco130I	CCWWGG	1 cut(s)	929
Eco47I	GGWCC	1 cut(s)	674
Eco57I	CTGAAG	2 cut(s)	205, 435
Eco91I	GGTNACC	1 cut(s)	1143
EcoO65I	GGTNACC	1 cut(s)	1143
EcoT14I	CCWWGG	1 cut(s)	929
ErhI	CCWWGG	1 cut(s)	929
FaeI	CATG	5 cut(s)	451, 632, 698, 725, 1299
FalI	AAGNNNNNCTT	2 cut(s)	330, 362
FaqI	GGGAC	2 cut(s)	9, 1147
FatI	CATG	5 cut(s)	447, 628, 694, 721, 1295
FauI	CCCGC	1 cut(s)	1123
FbaI	TGATCA	2 cut(s)	313, 1066
FblI	GTMKAC	1 cut(s)	1102
Fnu4HI	GCNGC	2 cut(s)	543, 800
FokI	GGATG	7 cut(s)	70, 535, 826, 1136, 1163, 1180, 1247
Fsp4HI	GCNGC	2 cut(s)	543, 800
FspBI	CTAG	9 cut(s)	165, 389, 536, 705, 1001, 1020, 1095, 1109, 1197
GluI	GCNGC	2 cut(s)	543, 800
GsuI	CTGGAG	1 cut(s)	824
HaeIII	GGCC	2 cut(s)	989, 1253
HapII	CCGG	3 cut(s)	753, 1148, 1254
HgaI	GACGC	2 cut(s)	772, 828
Hin1II	CATG	5 cut(s)	451, 632, 698, 725, 1299
HincII	GTYRAC	1 cut(s)	762
HindII	GTYRAC	1 cut(s)	762
HinfI	GANTC	5 cut(s)	128, 158, 230, 429, 1291
HpaII	CCGG	3 cut(s)	753, 1148, 1254
HphI	GGTGA	1 cut(s)	1137
Hpy166II	GTNNAC	5 cut(s)	140, 734, 762, 818, 1103
Hpy188I	TCNGA	7 cut(s)	33, 180, 242, 652, 775, 844, 1290
Hpy188III	TCNNGA	6 cut(s)	165, 208, 223, 497, 629, 898
Hpy8I	GTNNAC	5 cut(s)	140, 734, 762, 818, 1103
HpyAV	CCTTC	4 cut(s)	267, 410, 1075, 1212
HpyCH4III	ACNGT	3 cut(s)	148, 262, 891
HpyCH4IV	ACGT	2 cut(s)	73, 1191
HpyCH4V	TGCA	6 cut(s)	154, 376, 394, 665, 734, 877
HpyF10VI	GCNNNNNNNGC	5 cut(s)	104, 113, 539, 805, 1010
HpyF3I	CTNAG	4 cut(s)	278, 485, 642, 649
HpySE526I	ACGT	2 cut(s)	73, 1191
Hsp92II	CATG	5 cut(s)	451, 632, 698, 725, 1299
Ksp22I	TGATCA	2 cut(s)	313, 1066
LmnI	GCTCC	2 cut(s)	539, 805
Lsp1109I	GCAGC	1 cut(s)	786
LweI	GCATC	1 cut(s)	1228
MaeI	CTAG	9 cut(s)	165, 389, 536, 705, 1001, 1020, 1095, 1109, 1197
MaeII	ACGT	2 cut(s)	73, 1191
MaeIII	GTNAC	3 cut(s)	74, 1143, 1192
MbiI	CCGCTC	1 cut(s)	542
MflI	RGATCY	3 cut(s)	65, 458, 925
MhlI	GDGCHC	2 cut(s)	736, 886
MluCI	AATT	1 cut(s)	1074
MlyI	GAGTC	2 cut(s)	423, 1285
MmeI	TCCRAC	2 cut(s)	11, 603
MseI	TTAA	2 cut(s)	303, 1053
MslI	CAYNNNNRTG	1 cut(s)	844
MspA1I	CMGCKG	1 cut(s)	107
MspCI	CTTAAG	1 cut(s)	1052
MspI	CCGG	3 cut(s)	753, 1148, 1254
MspR9I	CCNGG	1 cut(s)	754
Mva1269I	GAATGC	1 cut(s)	851
MvnI	CGCG	2 cut(s)	209, 746
MwoI	GCNNNNNNNGC	5 cut(s)	104, 113, 539, 805, 1010
NciI	CCSGG	1 cut(s)	754
NlaIII	CATG	5 cut(s)	451, 632, 698, 725, 1299
NmuCI	GTSAC	1 cut(s)	1143
NruI	TCGCGA	1 cut(s)	209
NspI	RCATGY	1 cut(s)	451
NspV	TTCGAA	1 cut(s)	956
PagI	TCATGA	1 cut(s)	628
PcsI	WCGNNNNNNNCGW	1 cut(s)	486
PctI	GAATGC	1 cut(s)	851
PfeI	GAWTC	3 cut(s)	128, 158, 230
PflMI	CCANNNNNTGG	1 cut(s)	1042
PkrI	GCNGC	2 cut(s)	544, 801
PleI	GAGTC	2 cut(s)	423, 1285
PpsI	GAGTC	2 cut(s)	423, 1285
Ppu21I	YACGTR	2 cut(s)	74, 1192
PspEI	GGTNACC	1 cut(s)	1143
PspPI	GGNCC	2 cut(s)	674, 1251
PsuI	RGATCY	3 cut(s)	65, 458, 925
PvuII	CAGCTG	1 cut(s)	107
RruI	TCGCGA	1 cut(s)	209
RsaI	GTAC	2 cut(s)	743, 1246
RsaNI	GTAC	2 cut(s)	742, 1245
RseI	CAYNNNNRTG	1 cut(s)	844
SaqAI	TTAA	2 cut(s)	303, 1053
SatI	GCNGC	2 cut(s)	543, 800
Sau96I	GGNCC	2 cut(s)	674, 1251
SchI	GAGTC	2 cut(s)	423, 1285
ScrFI	CCNGG	1 cut(s)	754
SduI	GDGCHC	2 cut(s)	736, 886
SfaNI	GCATC	1 cut(s)	1228
SfcI	CTRYAG	1 cut(s)	462
SfuI	TTCGAA	1 cut(s)	956
SinI	GGWCC	1 cut(s)	674
SmiMI	CAYNNNNRTG	1 cut(s)	844
SmlI	CTYRAG	1 cut(s)	1052
SmoI	CTYRAG	1 cut(s)	1052
SnaBI	TACGTA	2 cut(s)	74, 1192
SpeI	ACTAGT	1 cut(s)	1196
Sse9I	AATT	1 cut(s)	1074
SsiI	CCGC	3 cut(s)	542, 948, 1130
SspMI	CTAG	9 cut(s)	165, 389, 536, 705, 1001, 1020, 1095, 1109, 1197
StyD4I	CCNGG	1 cut(s)	752
StyI	CCWWGG	1 cut(s)	929
TaaI	ACNGT	3 cut(s)	148, 262, 891
TaiI	ACGT	2 cut(s)	76, 1194
TaqI	TCGA	3 cut(s)	956, 1028, 1139
TasI	AATT	1 cut(s)	1074
TauI	GCSGC	1 cut(s)	545
TfiI	GAWTC	3 cut(s)	128, 158, 230
Tru1I	TTAA	2 cut(s)	303, 1053
Tru9I	TTAA	2 cut(s)	303, 1053
TscAI	CASTG	2 cut(s)	289, 820
TseFI	GTSAC	1 cut(s)	1143
TseI	GCWGC	1 cut(s)	799
Tsp45I	GTSAC	1 cut(s)	1143
TspDTI	ATGAA	4 cut(s)	243, 456, 539, 1274
TspRI	CASTG	2 cut(s)	289, 820
Van91I	CCANNNNNTGG	1 cut(s)	1042
Vha464I	CTTAAG	1 cut(s)	1052
VneI	GTGCAC	1 cut(s)	732
VpaK11BI	GGWCC	1 cut(s)	674
XbaI	TCTAGA	1 cut(s)	164
XceI	RCATGY	1 cut(s)	451
XmiI	GTMKAC	1 cut(s)	1102
XspI	CTAG	9 cut(s)	165, 389, 536, 705, 1001, 1020, 1095, 1109, 1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.