AT3G29035
NAC Family

(NAC) domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
N/A
Physical Location & Seq
Forward (+)
11033665 .. 11035308
1644 bp
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UTR
Exon/CDS
Intron
AT3G29035.1

Sequence Viewer

Length: 957 bp
ATGGATTACAAGGTATCAAGAAGTGGGGAGATAGTAGAAGGAGAAGTAGAAGATTCAGAAAAGATTGATTTACCACCTGGTTTCAGATTTCACCCAACTGATGAAGAACTTATAACACACTATCTAAGACCAAAGGTTGTAAACTCTTTTTTCTCTGCTATAGCTATTGGTGAAGTTGATCTCAACAAAGTCGAGCCTTGGGACTTGCCTTGGAAGGCTAAGCTTGGGGAAAAAGAGTGGTACTTCTTTTGCGTAAGAGACCGAAAATACCCGACTGGTTTAAGAACGAATCGTGCTACTAAAGCCGGTTATTGGAAAGCTACAGGGAAAGATAAAGAGATCTTCAAAGGGAAATCTCTTGTTGGTATGAAGAAAACATTGGTTTTCTACAAAGGAAGAGCTCCTAAAGGAGTAAAAACAAATTGGGTCATGCATGAGTATCGATTAGAAGGCAAATTCGCTATCGATAATCTCTCTAAAACCGCTAAGAACGAATGTGTTATTAGTCGTGTTTTTCATACACGGACTGATGGTACGAAGGAGCATATGTCCGTTGGTTTACCTCCGCTGATGGATTCTTCTCCATATCTAAAGAGTAGAGGACAAGACTCTTTAGCCGGGACCACCCTTGGTGGGTTGTTGTCTCACGTTACCTACTTCTCCGACCAAACAACCGATGACAAGAGTCTTGTGGCCGATTTTAAAACTACCATGTTTGGTTCCGGATCGACTAACTTTTTACCAAACATAGGTTCTCTACTAGACTTCGATCCTCTGTTTCTACAAAACAATTCTTCAGTACTGAAGATGTTGCTTGACAATGAAGAAACCCAATTTAAGAAGAATCTTCACAATTCAGGTTCATCAGAGAGTGAACTAACAGCGAGTTCTTGGCAAGGTCACAATTCTTATGGTTCCACTGGTCCAGTGAATCTTGATTGCGTTTGGAAATTCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

318

Amino Acids

35.83

Weight (kDa)

8.23

Isoelectric Point (pI)

29.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 25 - 149 3.9e-49 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 113
AccIII TCCGGA 1 cut(s) 722
AciI CCGC 2 cut(s) 483, 566
AclWI GGATC 2 cut(s) 733, 764
AcoI YGGCCR 1 cut(s) 693
AcsI RAATTY 2 cut(s) 455, 950
AcuI CTGAAG 2 cut(s) 780, 824
AfaI GTAC 3 cut(s) 242, 535, 801
AfiI CCNNNNNNNGG 3 cut(s) 312, 633, 749
AgsI TTSAA 1 cut(s) 346
AjnI CCWGG 1 cut(s) 76
AjuI GAANNNNNNNTTGG 4 cut(s) 362, 394, 736, 768
AluBI AGCT 4 cut(s) 164, 223, 320, 401
AluI AGCT 4 cut(s) 164, 223, 320, 401
Alw21I GWGCWC 1 cut(s) 403
Alw26I GTCTC 2 cut(s) 252, 648
AlwI GGATC 2 cut(s) 733, 764
Aor13HI TCCGGA 1 cut(s) 722
AoxI GGCC 1 cut(s) 693
ApoI RAATTY 2 cut(s) 455, 950
AspS9I GGNCC 2 cut(s) 621, 923
AsuC2I CCSGG 1 cut(s) 619
AsuHPI GGTGA 2 cut(s) 83, 182
AvaII GGWCC 2 cut(s) 621, 923
BanII GRGCYC 1 cut(s) 403
Bbv12I GWGCWC 1 cut(s) 403
BccI CCATC 2 cut(s) 524, 565
BcgI CGANNNNNNTGC 2 cut(s) 422, 456
BciT130I CCWGG 1 cut(s) 78
BcnI CCSGG 1 cut(s) 619
BcoDI GTCTC 2 cut(s) 252, 648
BfaI CTAG 1 cut(s) 761
BfmI CTRYAG 2 cut(s) 159, 321
BglII AGATCT 1 cut(s) 339
BlpI GCTNAGC 1 cut(s) 219
BmcAI AGTACT 1 cut(s) 801
Bme1390I CCNGG 2 cut(s) 78, 619
Bme18I GGWCC 2 cut(s) 621, 923
BmgT120I GGNCC 2 cut(s) 621, 923
BmiI GGNNCC 3 cut(s) 622, 721, 916
BmrFI CCNGG 2 cut(s) 78, 619
BoxI GACNNNNGTC 1 cut(s) 684
Bpu1102I GCTNAGC 1 cut(s) 219
BpuMI CCSGG 1 cut(s) 619
Bsa29I ATCGAT 2 cut(s) 442, 465
BsaI GGTCTC 1 cut(s) 252
BsaJI CCNNGG 3 cut(s) 197, 209, 628
BsaWI WCCGGW 1 cut(s) 722
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 3 cut(s) 312, 633, 749
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 3 cut(s) 280, 925, 926
BseAI TCCGGA 1 cut(s) 722
BseBI CCWGG 1 cut(s) 78
BseCI ATCGAT 2 cut(s) 442, 465
BseDI CCNNGG 3 cut(s) 197, 209, 628
BseLI CCNNNNNNNGG 3 cut(s) 312, 633, 749
BseNI ACTGG 3 cut(s) 280, 925, 926
BshFI GGCC 1 cut(s) 695
BshVI ATCGAT 2 cut(s) 442, 465
BsiHKAI GWGCWC 1 cut(s) 403
BsiSI CCGG 3 cut(s) 306, 618, 723
BslFI GGGAC 2 cut(s) 215, 634
BslI CCNNNNNNNGG 3 cut(s) 312, 633, 749
BsmAI GTCTC 2 cut(s) 252, 648
BsmFI GGGAC 2 cut(s) 215, 634
BsnI GGCC 1 cut(s) 695
Bso31I GGTCTC 1 cut(s) 252
Bsp1286I GDGCHC 1 cut(s) 403
Bsp13I TCCGGA 1 cut(s) 722
Bsp143I GATC 4 cut(s) 178, 339, 725, 769
Bsp1720I GCTNAGC 1 cut(s) 219
BspACI CCGC 2 cut(s) 483, 566
BspANI GGCC 1 cut(s) 695
BspDI ATCGAT 2 cut(s) 442, 465
BspEI TCCGGA 1 cut(s) 722
BspLI GGNNCC 3 cut(s) 622, 721, 916
BspPI GGATC 2 cut(s) 733, 764
BspQI GCTCTTC 1 cut(s) 391
BspTNI GGTCTC 1 cut(s) 252
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 3 cut(s) 280, 925, 926
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 3 cut(s) 197, 209, 628
BssMI GATC 4 cut(s) 178, 339, 725, 769
BssT1I CCWWGG 3 cut(s) 197, 209, 628
Bst2UI CCWGG 1 cut(s) 78
Bst6I CTCTTC 1 cut(s) 391
BstDEI CTNAG 3 cut(s) 125, 219, 486
BstKTI GATC 4 cut(s) 181, 342, 728, 772
BstMAI GTCTC 2 cut(s) 252, 648
BstMBI GATC 4 cut(s) 178, 339, 725, 769
BstMWI GCNNNNNNNGC 1 cut(s) 302
BstNI CCWGG 1 cut(s) 78
BstPAI GACNNNNGTC 1 cut(s) 684
BstSCI CCNGG 2 cut(s) 76, 617
BstSFI CTRYAG 2 cut(s) 159, 321
BstX2I RGATCY 1 cut(s) 339
BstYI RGATCY 1 cut(s) 339
Bsu15I ATCGAT 2 cut(s) 442, 465
BsuRI GGCC 1 cut(s) 695
BsuTUI ATCGAT 2 cut(s) 442, 465
BtsIMutI CAGTG 2 cut(s) 918, 933
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 2 cut(s) 621, 923
ClaI ATCGAT 2 cut(s) 442, 465
CsiI ACCWGGT 1 cut(s) 76
Csp6I GTAC 3 cut(s) 241, 534, 800
CviAII CATG 3 cut(s) 430, 434, 712
CviJI RGCY 9 cut(s) 164, 196, 218, 223, 305, 320, 401, 617, 695
CviKI_1 RGCY 9 cut(s) 164, 196, 218, 223, 305, 320, 401, 617, 695
CviQI GTAC 3 cut(s) 241, 534, 800
DdeI CTNAG 3 cut(s) 125, 219, 486
DpnI GATC 4 cut(s) 180, 341, 727, 771
DpnII GATC 4 cut(s) 178, 339, 725, 769
DraI TTTAAA 1 cut(s) 703
EaeI YGGCCR 1 cut(s) 693
Eam1104I CTCTTC 1 cut(s) 391
EarI CTCTTC 1 cut(s) 391
Ecl136II GAGCTC 1 cut(s) 401
Eco130I CCWWGG 3 cut(s) 197, 209, 628
Eco24I GRGCYC 1 cut(s) 403
Eco31I GGTCTC 1 cut(s) 252
Eco47I GGWCC 2 cut(s) 621, 923
Eco53kI GAGCTC 1 cut(s) 401
Eco57I CTGAAG 2 cut(s) 780, 824
EcoICRI GAGCTC 1 cut(s) 401
EcoRII CCWGG 1 cut(s) 76
EcoT14I CCWWGG 3 cut(s) 197, 209, 628
EcoT22I ATGCAT 1 cut(s) 435
EcoT38I GRGCYC 1 cut(s) 403
ErhI CCWWGG 3 cut(s) 197, 209, 628
FaeI CATG 3 cut(s) 433, 437, 715
FaqI GGGAC 2 cut(s) 215, 634
FatI CATG 3 cut(s) 429, 433, 711
FauNDI CATATG 1 cut(s) 546
FriOI GRGCYC 1 cut(s) 403
FspBI CTAG 1 cut(s) 761
HaeIII GGCC 1 cut(s) 695
HapII CCGG 3 cut(s) 306, 618, 723
Hin1II CATG 3 cut(s) 433, 437, 715
HindIII AAGCTT 1 cut(s) 221
HinfI GANTC 7 cut(s) 53, 289, 575, 608, 685, 844, 931
HpaII CCGG 3 cut(s) 306, 618, 723
HphI GGTGA 2 cut(s) 83, 182
Hpy166II GTNNAC 3 cut(s) 142, 560, 875
Hpy188I TCNGA 5 cut(s) 58, 86, 664, 868, 956
Hpy188III TCNNGA 3 cut(s) 18, 723, 935
Hpy8I GTNNAC 3 cut(s) 142, 560, 875
HpyAV CCTTC 4 cut(s) 32, 208, 443, 532
HpyCH4IV ACGT 1 cut(s) 648
HpyCH4V TGCA 1 cut(s) 433
HpyF10VI GCNNNNNNNGC 1 cut(s) 302
HpyF3I CTNAG 3 cut(s) 125, 219, 486
HpySE526I ACGT 1 cut(s) 648
Hsp92II CATG 3 cut(s) 433, 437, 715
Kpn2I TCCGGA 1 cut(s) 722
Kzo9I GATC 4 cut(s) 178, 339, 725, 769
LguI GCTCTTC 1 cut(s) 391
LmnI GCTCC 2 cut(s) 406, 541
MabI ACCWGGT 1 cut(s) 76
MaeI CTAG 1 cut(s) 761
MaeII ACGT 1 cut(s) 648
MaeIII GTNAC 2 cut(s) 649, 899
MalI GATC 4 cut(s) 180, 341, 727, 771
MboI GATC 4 cut(s) 178, 339, 725, 769
MflI RGATCY 1 cut(s) 339
MhlI GDGCHC 1 cut(s) 403
MluCI AATT 7 cut(s) 421, 455, 790, 833, 853, 904, 950
MlyI GAGTC 2 cut(s) 602, 694
MmeI TCCRAC 1 cut(s) 687
MnlI CCTC 3 cut(s) 573, 593, 783
Mph1103I ATGCAT 1 cut(s) 435
MroI TCCGGA 1 cut(s) 722
MseI TTAA 3 cut(s) 281, 702, 837
MspA1I CMGCKG 1 cut(s) 568
MspI CCGG 3 cut(s) 306, 618, 723
MspR9I CCNGG 2 cut(s) 78, 619
MvaI CCWGG 1 cut(s) 78
MwoI GCNNNNNNNGC 1 cut(s) 302
NciI CCSGG 1 cut(s) 619
NdeI CATATG 1 cut(s) 546
NdeII GATC 4 cut(s) 178, 339, 725, 769
NlaIII CATG 3 cut(s) 433, 437, 715
NlaIV GGNNCC 3 cut(s) 622, 721, 916
NmuCI GTSAC 1 cut(s) 899
NsiI ATGCAT 1 cut(s) 435
PciSI GCTCTTC 1 cut(s) 391
PfeI GAWTC 5 cut(s) 53, 289, 575, 844, 931
PleI GAGTC 2 cut(s) 602, 693
PpsI GAGTC 2 cut(s) 602, 693
PshAI GACNNNNGTC 1 cut(s) 684
PsiI TTATAA 1 cut(s) 113
Psp124BI GAGCTC 1 cut(s) 403
Psp6I CCWGG 1 cut(s) 76
PspGI CCWGG 1 cut(s) 76
PspN4I GGNNCC 3 cut(s) 622, 721, 916
PspPI GGNCC 2 cut(s) 621, 923
PsuI RGATCY 1 cut(s) 339
RsaI GTAC 3 cut(s) 242, 535, 801
RsaNI GTAC 3 cut(s) 241, 534, 800
SacI GAGCTC 1 cut(s) 403
SapI GCTCTTC 1 cut(s) 391
SaqAI TTAA 3 cut(s) 281, 702, 837
Sau3AI GATC 4 cut(s) 178, 339, 725, 769
Sau96I GGNCC 2 cut(s) 621, 923
ScaI AGTACT 1 cut(s) 801
SchI GAGTC 2 cut(s) 602, 694
ScrFI CCNGG 2 cut(s) 78, 619
SduI GDGCHC 1 cut(s) 403
SexAI ACCWGGT 1 cut(s) 76
SfcI CTRYAG 2 cut(s) 159, 321
SinI GGWCC 2 cut(s) 621, 923
Sse9I AATT 7 cut(s) 421, 455, 790, 833, 853, 904, 950
SsiI CCGC 2 cut(s) 483, 566
SspMI CTAG 1 cut(s) 761
SstI GAGCTC 1 cut(s) 403
StyD4I CCNGG 2 cut(s) 76, 617
StyI CCWWGG 3 cut(s) 197, 209, 628
TaiI ACGT 1 cut(s) 651
TaqI TCGA 5 cut(s) 192, 442, 465, 728, 768
TaqII GACCGA 1 cut(s) 276
TasI AATT 7 cut(s) 421, 455, 790, 833, 853, 904, 950
TatI WGTACW 1 cut(s) 799
TfiI GAWTC 5 cut(s) 53, 289, 575, 844, 931
Tru1I TTAA 3 cut(s) 281, 702, 837
Tru9I TTAA 3 cut(s) 281, 702, 837
TscAI CASTG 2 cut(s) 925, 933
TseFI GTSAC 1 cut(s) 899
Tsp45I GTSAC 1 cut(s) 899
TspDTI ATGAA 5 cut(s) 117, 383, 506, 837, 852
TspGWI ACGGA 2 cut(s) 538, 541
TspRI CASTG 2 cut(s) 925, 933
VpaK11BI GGWCC 2 cut(s) 621, 923
XapI RAATTY 2 cut(s) 455, 950
XspI CTAG 1 cut(s) 761
ZrmI AGTACT 1 cut(s) 801
Zsp2I ATGCAT 1 cut(s) 435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.