AT3G46760

Receptor like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
N/A
Physical Location & Seq
Forward (+)
17221936 .. 17223272
1337 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46760.1

Sequence Viewer

Length: 1014 bp
ATGTTTGCAGGTATATTTCTAAGAATGGGAGCAGCATTAAGATCAATGTATGTGAACAGCAAGTATGAAGAAGTACGAGAAGAATGGGAGGAAGATTACAGTCCTCAGAGGTTTTCTTACAAAGCTCTCTACAAAGCAACCAAAGGGTTCAAAGAGAGCGAGTTATTCGGTACAGAGGCTAACGGGACAGTCTACAAAGGAAAGCTCTCTTCTAATGCACAGATTGCTGTAAAGAGAGTTTCTTTAGATGCAGAACAAGATACCAAACACCTTGTTTCTCAGATTGTTGGTATTGGGAAGTTAAGGCACAAGAACCTTGTGCAGCTCTTAGGATACTGCAGAAGAAAAGGTGAATTACTCTTGGTCTATGATTATATGCCTTATGGAAATCTTGATGATTTCTTGTTTAATGAGGAAAGGCCTAATCTAAGTTGGTCACAAAGGTTTCATATAATCAAAGGAGTTGCTTCAGCTCTTCTTTATTTGCATGAACAGATCGTTCTTCACCGAGATGTAAAAGCCGCAAATGTACTCTTGGATGAGGATTTAAACGGGCGACTAGATTACGGTCTAGCAAGATTTGGTACAAACAGGAACCCAATGCTAGGAAGCGTAGGTTATGTGGCTCCAGAGCTAATAATAACAGGAATGCCGACAACCAAAGCCGATGTTTATTCATTCGGAGCATTACTACTTGAGTTTGCTTGTGGAAGAATGTTCATTGAGTATCCAGGGAAGCCTGAAGAGTTTAACTTAATCAGCTGGGTGTGTCAATGCTGGAAAAGAGGGAACTTGGTTGGCGCCCGAGACGCTAGATTGGAAGGAGACTACGTCTGCAAGGAGATAGAGATGGTACTAAAGCTTGGTCTACTATGTGCACAGTACAATCCAGAGGATAGGCCTAGTATGTCCCAAGTGGTAAACTATCTTGAAGGAAATGATGTTTTGCCTGAGATGCCTCCAGACACTCCTGGGATCAGTATTCCAACACCGTACCATGAAGTTCTTGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

337

Amino Acids

38.21

Weight (kDa)

5.8

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 51 - 308 2.3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 54 - 310 1.4e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 800
AccI GTMKAC 2 cut(s) 192, 868
AciI CCGC 1 cut(s) 522
AclWI GGATC 1 cut(s) 983
AcuI CTGAAG 2 cut(s) 453, 762
AcyI GRCGYC 1 cut(s) 801
AfaI GTAC 7 cut(s) 75, 172, 531, 586, 855, 884, 995
AfiI CCNNNNNNNGG 1 cut(s) 605
AgsI TTSAA 2 cut(s) 151, 932
AjnI CCWGG 2 cut(s) 730, 970
AluBI AGCT 7 cut(s) 125, 205, 325, 473, 634, 762, 862
AluI AGCT 7 cut(s) 125, 205, 325, 473, 634, 762, 862
Alw21I GWGCWC 1 cut(s) 880
Alw26I GTCTC 2 cut(s) 801, 819
Alw44I GTGCAC 1 cut(s) 876
AlwI GGATC 1 cut(s) 983
Ama87I CYCGRG 1 cut(s) 804
AoxI GGCC 2 cut(s) 419, 899
ApaLI GTGCAC 1 cut(s) 876
ApeKI GCWGC 2 cut(s) 32, 322
AspLEI GCGC 1 cut(s) 803
AsuHPI GGTGA 2 cut(s) 362, 497
AvaI CYCGRG 1 cut(s) 804
BaeGI GKGCMC 1 cut(s) 880
BanI GGYRCC 1 cut(s) 800
Bbv12I GWGCWC 1 cut(s) 880
BbvI GCAGC 2 cut(s) 44, 334
BccI CCATC 1 cut(s) 844
BciT130I CCWGG 2 cut(s) 732, 972
BciVI GTATCC 2 cut(s) 326, 738
BcoDI GTCTC 2 cut(s) 801, 819
BfaI CTAG 5 cut(s) 560, 572, 605, 813, 903
BfmI CTRYAG 1 cut(s) 337
BfoI RGCGCY 1 cut(s) 804
BfuI GTATCC 2 cut(s) 326, 738
BisI GCNGC 3 cut(s) 33, 323, 522
BlsI GCNGC 3 cut(s) 34, 324, 523
Bme1390I CCNGG 2 cut(s) 732, 972
BmeT110I CYCGRG 1 cut(s) 804
BmiI GGNNCC 3 cut(s) 596, 627, 802
BmrFI CCNGG 2 cut(s) 732, 972
BmsI GCATC 2 cut(s) 238, 945
BpmI CTGGAG 2 cut(s) 612, 945
BpuEI CTTGAG 1 cut(s) 716
BsaHI GRCGYC 1 cut(s) 801
BsaJI CCNNGG 2 cut(s) 731, 971
BsaXI ACNNNNNCTCC 2 cut(s) 816, 846
Bsc4I CCNNNNNNNGG 1 cut(s) 605
BseBI CCWGG 2 cut(s) 732, 972
BseDI CCNNGG 2 cut(s) 731, 971
BseGI GGATG 1 cut(s) 544
BseLI CCNNNNNNNGG 1 cut(s) 605
BseMII CTCAG 3 cut(s) 119, 293, 942
BseSI GKGCMC 1 cut(s) 880
BseXI GCAGC 2 cut(s) 44, 334
BseYI CCCAGC 1 cut(s) 762
BsgI GTGCAG 1 cut(s) 341
BshFI GGCC 2 cut(s) 421, 901
BshNI GGYRCC 1 cut(s) 800
BsiHKAI GWGCWC 1 cut(s) 880
BsiHKCI CYCGRG 1 cut(s) 804
BslFI GGGAC 2 cut(s) 199, 895
BslI CCNNNNNNNGG 1 cut(s) 605
BsmAI GTCTC 2 cut(s) 801, 819
BsmBI CGTCTC 1 cut(s) 801
BsmFI GGGAC 2 cut(s) 199, 895
BsmI GAATGC 1 cut(s) 654
BsnI GGCC 2 cut(s) 421, 901
BsoBI CYCGRG 1 cut(s) 804
Bsp1286I GDGCHC 1 cut(s) 880
Bsp143I GATC 3 cut(s) 41, 495, 975
BspACI CCGC 1 cut(s) 522
BspANI GGCC 2 cut(s) 421, 901
BspCNI CTCAG 3 cut(s) 118, 292, 943
BspLI GGNNCC 3 cut(s) 596, 627, 802
BspMAI CTGCAG 1 cut(s) 341
BspPI GGATC 1 cut(s) 983
BspQI GCTCTTC 1 cut(s) 480
BspT107I GGYRCC 1 cut(s) 800
BssECI CCNNGG 2 cut(s) 731, 971
BssMI GATC 3 cut(s) 41, 495, 975
BssNI GRCGYC 1 cut(s) 801
Bst2UI CCWGG 2 cut(s) 732, 972
Bst4CI ACNGT 5 cut(s) 101, 190, 569, 882, 993
Bst6I CTCTTC 3 cut(s) 214, 480, 738
BstACI GRCGYC 1 cut(s) 801
BstAPI GCANNNNNTGC 1 cut(s) 224
BstDEI CTNAG 6 cut(s) 20, 105, 279, 328, 428, 951
BstF5I GGATG 1 cut(s) 544
BstH2I RGCGCY 1 cut(s) 804
BstHHI GCGC 1 cut(s) 803
BstKTI GATC 3 cut(s) 44, 498, 978
BstMAI GTCTC 2 cut(s) 801, 819
BstMBI GATC 3 cut(s) 41, 495, 975
BstMWI GCNNNNNNNGC 3 cut(s) 224, 809, 955
BstNI CCWGG 2 cut(s) 732, 972
BstSCI CCNGG 2 cut(s) 730, 970
BstSFI CTRYAG 1 cut(s) 337
BstSLI GKGCMC 1 cut(s) 880
BstV1I GCAGC 2 cut(s) 44, 334
BsuI GTATCC 2 cut(s) 326, 738
BsuRI GGCC 2 cut(s) 421, 901
BtsCI GGATG 1 cut(s) 544
CfoI GCGC 1 cut(s) 803
CseI GACGC 1 cut(s) 818
Csp6I GTAC 7 cut(s) 74, 171, 530, 585, 854, 883, 994
CviAII CATG 2 cut(s) 488, 998
CviQI GTAC 7 cut(s) 74, 171, 530, 585, 854, 883, 994
DdeI CTNAG 6 cut(s) 20, 105, 279, 328, 428, 951
DinI GGCGCC 1 cut(s) 802
DpnI GATC 3 cut(s) 43, 497, 977
DpnII GATC 3 cut(s) 41, 495, 975
DraI TTTAAA 1 cut(s) 549
Eam1104I CTCTTC 3 cut(s) 214, 480, 738
EarI CTCTTC 3 cut(s) 214, 480, 738
Eco147I AGGCCT 2 cut(s) 421, 901
Eco57I CTGAAG 2 cut(s) 453, 762
Eco88I CYCGRG 1 cut(s) 804
EcoRII CCWGG 2 cut(s) 730, 970
EgeI GGCGCC 1 cut(s) 802
EheI GGCGCC 1 cut(s) 802
Esp3I CGTCTC 1 cut(s) 801
FaeI CATG 2 cut(s) 491, 1001
FaqI GGGAC 2 cut(s) 199, 895
FatI CATG 2 cut(s) 487, 997
FblI GTMKAC 2 cut(s) 192, 868
Fnu4HI GCNGC 3 cut(s) 33, 323, 522
FokI GGATG 1 cut(s) 551
Fsp4HI GCNGC 3 cut(s) 33, 323, 522
FspBI CTAG 5 cut(s) 560, 572, 605, 813, 903
GlaI GCGC 1 cut(s) 802
GluI GCNGC 3 cut(s) 33, 323, 522
GsaI CCCAGC 1 cut(s) 766
GsuI CTGGAG 2 cut(s) 612, 945
HaeII RGCGCY 1 cut(s) 804
HaeIII GGCC 2 cut(s) 421, 901
HgaI GACGC 1 cut(s) 818
HhaI GCGC 1 cut(s) 803
Hin1I GRCGYC 1 cut(s) 801
Hin1II CATG 2 cut(s) 491, 1001
Hin6I GCGC 1 cut(s) 801
HinP1I GCGC 1 cut(s) 801
HindIII AAGCTT 1 cut(s) 860
HphI GGTGA 2 cut(s) 362, 497
Hpy166II GTNNAC 5 cut(s) 55, 193, 869, 878, 922
Hpy188I TCNGA 3 cut(s) 108, 282, 683
Hpy188III TCNNGA 5 cut(s) 392, 629, 890, 929, 962
Hpy8I GTNNAC 5 cut(s) 55, 193, 869, 878, 922
HpyAV CCTTC 2 cut(s) 815, 926
HpyCH4III ACNGT 5 cut(s) 101, 190, 569, 882, 993
HpyCH4IV ACGT 1 cut(s) 831
HpyCH4V TGCA 8 cut(s) 8, 218, 251, 322, 339, 487, 837, 878
HpyF10VI GCNNNNNNNGC 3 cut(s) 224, 809, 955
HpyF3I CTNAG 6 cut(s) 20, 105, 279, 328, 428, 951
HpySE526I ACGT 1 cut(s) 831
Hsp92I GRCGYC 1 cut(s) 801
Hsp92II CATG 2 cut(s) 491, 1001
HspAI GCGC 1 cut(s) 801
KasI GGCGCC 1 cut(s) 800
Kzo9I GATC 3 cut(s) 41, 495, 975
LguI GCTCTTC 1 cut(s) 480
LmnI GCTCC 3 cut(s) 29, 631, 683
Lsp1109I GCAGC 2 cut(s) 44, 334
LweI GCATC 2 cut(s) 238, 945
MaeI CTAG 5 cut(s) 560, 572, 605, 813, 903
MaeII ACGT 1 cut(s) 831
MaeIII GTNAC 1 cut(s) 435
MalI GATC 3 cut(s) 43, 497, 977
MboI GATC 3 cut(s) 41, 495, 975
MboII GAAGA 9 cut(s) 80, 92, 104, 201, 354, 467, 494, 723, 755
MhlI GDGCHC 1 cut(s) 880
MluCI AATT 1 cut(s) 353
Mly113I GGCGCC 1 cut(s) 801
MmeI TCCRAC 1 cut(s) 1010
MnlI CCTC 9 cut(s) 82, 102, 114, 169, 406, 535, 779, 886, 969
MseI TTAA 6 cut(s) 38, 302, 408, 548, 750, 755
MslI CAYNNNNRTG 1 cut(s) 510
MspA1I CMGCKG 1 cut(s) 762
MspR9I CCNGG 2 cut(s) 732, 972
Mva1269I GAATGC 1 cut(s) 654
MvaI CCWGG 2 cut(s) 732, 972
MwoI GCNNNNNNNGC 3 cut(s) 224, 809, 955
NarI GGCGCC 1 cut(s) 801
NdeII GATC 3 cut(s) 41, 495, 975
NlaIII CATG 2 cut(s) 491, 1001
NlaIV GGNNCC 3 cut(s) 596, 627, 802
NmuCI GTSAC 1 cut(s) 435
PceI AGGCCT 2 cut(s) 421, 901
PciSI GCTCTTC 1 cut(s) 480
PctI GAATGC 1 cut(s) 654
PflFI GACNNNGTC 1 cut(s) 830
PkrI GCNGC 3 cut(s) 34, 324, 523
PluTI GGCGCC 1 cut(s) 804
Psp6I CCWGG 2 cut(s) 730, 970
PspFI CCCAGC 1 cut(s) 762
PspGI CCWGG 2 cut(s) 730, 970
PspN4I GGNNCC 3 cut(s) 596, 627, 802
PstI CTGCAG 1 cut(s) 341
PsyI GACNNNGTC 1 cut(s) 830
PvuII CAGCTG 1 cut(s) 762
RsaI GTAC 7 cut(s) 75, 172, 531, 586, 855, 884, 995
RsaNI GTAC 7 cut(s) 74, 171, 530, 585, 854, 883, 994
RseI CAYNNNNRTG 1 cut(s) 510
SapI GCTCTTC 1 cut(s) 480
SaqAI TTAA 6 cut(s) 38, 302, 408, 548, 750, 755
SatI GCNGC 3 cut(s) 33, 323, 522
Sau3AI GATC 3 cut(s) 41, 495, 975
ScrFI CCNGG 2 cut(s) 732, 972
SduI GDGCHC 1 cut(s) 880
SfaNI GCATC 2 cut(s) 238, 945
SfcI CTRYAG 1 cut(s) 337
SfoI GGCGCC 1 cut(s) 802
SmiMI CAYNNNNRTG 1 cut(s) 510
SmlI CTYRAG 1 cut(s) 695
SmoI CTYRAG 1 cut(s) 695
Sse9I AATT 1 cut(s) 353
SseBI AGGCCT 2 cut(s) 421, 901
SsiI CCGC 1 cut(s) 522
SspDI GGCGCC 1 cut(s) 800
SspMI CTAG 5 cut(s) 560, 572, 605, 813, 903
StuI AGGCCT 2 cut(s) 421, 901
StyD4I CCNGG 2 cut(s) 730, 970
TaaI ACNGT 5 cut(s) 101, 190, 569, 882, 993
TaiI ACGT 1 cut(s) 834
TasI AATT 1 cut(s) 353
TatI WGTACW 2 cut(s) 529, 882
TauI GCSGC 1 cut(s) 524
Tru1I TTAA 6 cut(s) 38, 302, 408, 548, 750, 755
Tru9I TTAA 6 cut(s) 38, 302, 408, 548, 750, 755
TseFI GTSAC 1 cut(s) 435
TseI GCWGC 2 cut(s) 32, 322
Tsp45I GTSAC 1 cut(s) 435
TspDTI ATGAA 6 cut(s) 81, 437, 504, 666, 709, 1014
Tth111I GACNNNGTC 1 cut(s) 830
VneI GTGCAC 1 cut(s) 876
XmiI GTMKAC 2 cut(s) 192, 868
XspI CTAG 5 cut(s) 560, 572, 605, 813, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.