AT3G62670
MYB Family

two-component response regulator ARR19

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
N/A
Physical Location & Seq
Reverse (-)
23176556 .. 23178294
1739 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G62670.1

Sequence Viewer

Length: 1281 bp
ATGTCAGTTTTTTCGAACATACTCGATGAGAACTCTCGCAACTTGCGAAACGAAATACCTTGTGATGATGGAATTGCATCTCCCATCAACGACGACGACGAAGAGTTCTTGACTAAAAGTAATAGGGTTCTTTTGGTCGGTGCAGATTCCAATTCGTCTTTGAAGAATCTCATGACACAGTATTCCTATCAAGTAACGAAATATGAGAGCGGAGAAGAGGCCATGGCTTTCTTGATGAAGAATAAGCATGAGATCGATCTAGTGATTTGGGATTTCCATATGCCCGATATCAATGGACTCGACGCTCTCAATATCATTGGTAAACAGATGGATTTACCCGTAGTAATCATGTCTCATGAATACAAGAAGGAAACGGTGATGGAATCGATTAAGTACGGTGCGTGTGACTTTCTTGTGAAGCCGGTGAGCAAAGAGGTCATTGCAGTTCTATGGCGACATGTTTATCGAAAAAGGATGTCAAAATCTGGTTTAGATAAACCGGGTGAATCAGGTACGGTTGAATCAGATCCGGACGAATACGACGATTTAGAGCAAGACAATCTCTATGAGAGCAACGAAGAAGGCTCCAAAAACACTTGCGATCACAAAGAAGAGAAGTCTCCGACCAAGAAACCGCGGATGCAATGGACTCCTGAACTTCACCACAAATTTGAAGTAGCCGTCGAAAAAATGGGCAGCCTTGAGAAGGCTTTTCCAAAGACGATTCTCAAATATATGCAAGAAGAATTGAATGTCCAGGGGCTCACTAGAAACAACGTAGCCAGTCATCTCCAGAAGTACCGTCAAAGTTCCAAAAAGACCTGCACTCCTCAGGAGCCTCAAGAAGATTTTGTCTGGGGTAATGCTGGGCCAGATGTCACTCTTGCAGCCTCTAAAACGCTCCTAAGCTCCCATGCTACACCATCGTATTTGATAAACAATCAAGCTGCGCCTAGAGGATCATATTTCATGAACAATATCCCGTATCCATCAACCAGTTGCCTGCCAGTGAACAACAACAACTGCTTCATGACCAACCCTTCCACTTATATTGACCAATTCCAGCACCAGCTGCAGCAGCAGCAGCAACATCAACAGTACCAGTCTACTCTAAATAGTATATCTGCCATGCTAACCAAGCAAGAATCTAGACACGTGCCATCATCAGCCATGGAAAATTCCGAGCCGCTCATGATCTATAATTCAAATCTACCTTTCGGTATCGACGAGTGTTTCCCACCTGCAGGATTCAACATTTTCGATCAGATTGGTCACAATTGA

Protein Analysis

426

Amino Acids

48.46

Weight (kDa)

5.19

Isoelectric Point (pI)

56.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Response_reg PF00072 52 - 147 1.5e-18 Response regulator receiver domain
Myb_DNA-binding PF00249 213 - 268 4.1e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1249
Acc36I ACCTGC 2 cut(s) 830, 1249
AccBSI CCGCTC 2 cut(s) 210, 1189
AccI GTMKAC 1 cut(s) 1106
AccII CGCG 1 cut(s) 637
AccIII TCCGGA 1 cut(s) 529
AciI CCGC 4 cut(s) 210, 635, 637, 1187
AclWI GGATC 2 cut(s) 521, 967
AcsI RAATTY 2 cut(s) 668, 1177
AcvI CACGTG 1 cut(s) 1156
AfaI GTAC 4 cut(s) 395, 514, 800, 1100
AfiI CCNNNNNNNGG 2 cut(s) 706, 1244
AflIII ACRYGT 2 cut(s) 457, 1153
AgsI TTSAA 6 cut(s) 163, 521, 674, 751, 1206, 1252
AjnI CCWGG 1 cut(s) 756
AluBI AGCT 3 cut(s) 909, 947, 1072
AluI AGCT 3 cut(s) 909, 947, 1072
Alw26I GTCTC 2 cut(s) 357, 624
AlwI GGATC 2 cut(s) 521, 967
Aor13HI TCCGGA 1 cut(s) 529
AoxI GGCC 2 cut(s) 219, 869
ApeKI GCWGC 8 cut(s) 696, 887, 947, 1072, 1075, 1078, 1081, 1084
ApoI RAATTY 2 cut(s) 668, 1177
AspLEI GCGC 1 cut(s) 952
AspS9I GGNCC 1 cut(s) 869
AsuC2I CCSGG 1 cut(s) 501
AsuHPI GGTGA 4 cut(s) 388, 436, 515, 653
AsuII TTCGAA 1 cut(s) 14
AxyI CCTNAGG 1 cut(s) 831
BanII GRGCYC 1 cut(s) 765
BbrPI CACGTG 1 cut(s) 1156
BbvI GCAGC 8 cut(s) 708, 899, 934, 1059, 1087, 1090, 1093, 1096
BccI CCATC 7 cut(s) 62, 92, 322, 373, 931, 997, 1168
BceAI ACGGC 1 cut(s) 665
BciT130I CCWGG 1 cut(s) 758
BciVI GTATCC 1 cut(s) 996
BcnI CCSGG 1 cut(s) 501
BcoDI GTCTC 2 cut(s) 357, 624
BfaI CTAG 4 cut(s) 260, 768, 954, 1149
BfmI CTRYAG 2 cut(s) 1073, 1242
BfuAI ACCTGC 2 cut(s) 830, 1249
BfuI GTATCC 1 cut(s) 996
BisI GCNGC 9 cut(s) 697, 888, 948, 1073, 1076, 1079, 1082, 1085, 1187
BlsI GCNGC 9 cut(s) 698, 889, 949, 1074, 1077, 1080, 1083, 1086, 1188
Bme1390I CCNGG 2 cut(s) 501, 758
BmgT120I GGNCC 1 cut(s) 869
BmiI GGNNCC 2 cut(s) 586, 837
BmrFI CCNGG 2 cut(s) 501, 758
BmsI GCATC 2 cut(s) 86, 630
BpmI CTGGAG 1 cut(s) 776
Bpu10I CCTNAGC 1 cut(s) 905
Bpu14I TTCGAA 1 cut(s) 14
BpuEI CTTGAG 2 cut(s) 722, 825
BpuMI CCSGG 1 cut(s) 501
Bsa29I ATCGAT 2 cut(s) 255, 386
BsaAI YACGTR 1 cut(s) 1156
BsaJI CCNNGG 4 cut(s) 222, 635, 757, 1170
BsaWI WCCGGW 1 cut(s) 529
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 2 cut(s) 706, 1244
Bse118I RCCGGY 1 cut(s) 421
Bse1I ACTGG 4 cut(s) 783, 996, 1007, 1102
Bse21I CCTNAGG 1 cut(s) 831
Bse3DI GCAATG 2 cut(s) 438, 650
BseAI TCCGGA 1 cut(s) 529
BseBI CCWGG 1 cut(s) 758
BseCI ATCGAT 2 cut(s) 255, 386
BseDI CCNNGG 4 cut(s) 222, 635, 757, 1170
BseGI GGATG 2 cut(s) 480, 645
BseLI CCNNNNNNNGG 2 cut(s) 706, 1244
BseMI GCAATG 2 cut(s) 438, 650
BseMII CTCAG 1 cut(s) 845
BseNI ACTGG 4 cut(s) 783, 996, 1007, 1102
BseRI GAGGAG 1 cut(s) 819
BseXI GCAGC 8 cut(s) 708, 899, 934, 1059, 1087, 1090, 1093, 1096
BseYI CCCAGC 1 cut(s) 866
BsgI GTGCAG 2 cut(s) 162, 808
Bsh1236I CGCG 1 cut(s) 637
BshFI GGCC 2 cut(s) 221, 871
BshVI ATCGAT 2 cut(s) 255, 386
BsiSI CCGG 3 cut(s) 422, 500, 530
BslI CCNNNNNNNGG 2 cut(s) 706, 1244
BsmAI GTCTC 2 cut(s) 357, 624
BsnI GGCC 2 cut(s) 221, 871
Bsp119I TTCGAA 1 cut(s) 14
Bsp1286I GDGCHC 1 cut(s) 765
Bsp13I TCCGGA 1 cut(s) 529
Bsp143I GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
Bsp19I CCATGG 2 cut(s) 222, 1170
BspACI CCGC 4 cut(s) 210, 635, 637, 1187
BspANI GGCC 2 cut(s) 221, 871
BspCNI CTCAG 1 cut(s) 844
BspDI ATCGAT 2 cut(s) 255, 386
BspEI TCCGGA 1 cut(s) 529
BspFNI CGCG 1 cut(s) 637
BspHI TCATGA 5 cut(s) 171, 355, 969, 1029, 1191
BspLI GGNNCC 2 cut(s) 586, 837
BspMAI CTGCAG 2 cut(s) 1077, 1246
BspMI ACCTGC 2 cut(s) 830, 1249
BspPI GGATC 2 cut(s) 521, 967
BspT104I TTCGAA 1 cut(s) 14
BsrBI CCGCTC 2 cut(s) 210, 1189
BsrDI GCAATG 2 cut(s) 438, 650
BsrFI RCCGGY 1 cut(s) 421
BsrI ACTGG 4 cut(s) 783, 996, 1007, 1102
BssAI RCCGGY 1 cut(s) 421
BssECI CCNNGG 4 cut(s) 222, 635, 757, 1170
BssMI GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
BssT1I CCWWGG 2 cut(s) 222, 1170
Bst2UI CCWGG 1 cut(s) 758
Bst4CI ACNGT 6 cut(s) 180, 376, 398, 517, 803, 1098
Bst6I CTCTTC 3 cut(s) 96, 210, 606
BstAPI GCANNNNNTGC 1 cut(s) 1072
BstBAI YACGTR 1 cut(s) 1156
BstBI TTCGAA 1 cut(s) 14
BstC8I GCNNGC 1 cut(s) 1004
BstDEI CTNAG 2 cut(s) 831, 905
BstDSI CCRYGG 3 cut(s) 222, 635, 1170
BstENI CCTNNNNNAGG 1 cut(s) 704
BstF5I GGATG 2 cut(s) 480, 645
BstFNI CGCG 1 cut(s) 637
BstHHI GCGC 1 cut(s) 952
BstKTI GATC 7 cut(s) 255, 259, 529, 604, 962, 1197, 1264
BstMAI GTCTC 2 cut(s) 357, 624
BstMBI GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
BstMWI GCNNNNNNNGC 5 cut(s) 1072, 1078, 1081, 1084, 1138
BstNI CCWGG 1 cut(s) 758
BstNSI RCATGY 1 cut(s) 461
BstSCI CCNGG 2 cut(s) 499, 756
BstSFI CTRYAG 2 cut(s) 1073, 1242
BstUI CGCG 1 cut(s) 637
BstV1I GCAGC 8 cut(s) 708, 899, 934, 1059, 1087, 1090, 1093, 1096
BstX2I RGATCY 1 cut(s) 526
BstYI RGATCY 1 cut(s) 526
Bsu15I ATCGAT 2 cut(s) 255, 386
Bsu36I CCTNAGG 1 cut(s) 831
BsuI GTATCC 1 cut(s) 996
BsuRI GGCC 2 cut(s) 221, 871
BsuTUI ATCGAT 2 cut(s) 255, 386
BtgI CCRYGG 3 cut(s) 222, 635, 1170
BtsCI GGATG 2 cut(s) 480, 645
BtsIMutI CAGTG 1 cut(s) 1014
BveI ACCTGC 2 cut(s) 830, 1249
Cac8I GCNNGC 1 cut(s) 1004
CciI TCATGA 5 cut(s) 171, 355, 969, 1029, 1191
CfoI GCGC 1 cut(s) 952
Cfr10I RCCGGY 1 cut(s) 421
Cfr13I GGNCC 1 cut(s) 869
Cfr42I CCGCGG 1 cut(s) 638
ClaI ATCGAT 2 cut(s) 255, 386
CseI GACGC 1 cut(s) 311
Csp6I GTAC 4 cut(s) 394, 513, 799, 1099
CspCI CAANNNNNGTGG 2 cut(s) 1033, 1068
CviQI GTAC 4 cut(s) 394, 513, 799, 1099
DdeI CTNAG 2 cut(s) 831, 905
DpnI GATC 7 cut(s) 254, 258, 528, 603, 961, 1196, 1263
DpnII GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
Eam1104I CTCTTC 3 cut(s) 96, 210, 606
EarI CTCTTC 3 cut(s) 96, 210, 606
Eco130I CCWWGG 2 cut(s) 222, 1170
Eco24I GRGCYC 1 cut(s) 765
Eco32I GATATC 1 cut(s) 289
Eco72I CACGTG 1 cut(s) 1156
Eco81I CCTNAGG 1 cut(s) 831
EcoNI CCTNNNNNAGG 1 cut(s) 704
EcoRII CCWGG 1 cut(s) 756
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 2 cut(s) 222, 1170
EcoT38I GRGCYC 1 cut(s) 765
ErhI CCWWGG 2 cut(s) 222, 1170
FauNDI CATATG 1 cut(s) 279
FblI GTMKAC 1 cut(s) 1106
Fnu4HI GCNGC 9 cut(s) 697, 888, 948, 1073, 1076, 1079, 1082, 1085, 1187
FokI GGATG 2 cut(s) 487, 652
FriOI GRGCYC 1 cut(s) 765
Fsp4HI GCNGC 9 cut(s) 697, 888, 948, 1073, 1076, 1079, 1082, 1085, 1187
FspBI CTAG 4 cut(s) 260, 768, 954, 1149
GlaI GCGC 1 cut(s) 951
GluI GCNGC 9 cut(s) 697, 888, 948, 1073, 1076, 1079, 1082, 1085, 1187
GsaI CCCAGC 1 cut(s) 870
GsuI CTGGAG 1 cut(s) 776
HaeIII GGCC 2 cut(s) 221, 871
HapII CCGG 3 cut(s) 422, 500, 530
HgaI GACGC 1 cut(s) 311
HhaI GCGC 1 cut(s) 952
Hin6I GCGC 1 cut(s) 950
HinP1I GCGC 1 cut(s) 950
HpaII CCGG 3 cut(s) 422, 500, 530
HphI GGTGA 4 cut(s) 388, 436, 515, 653
Hpy166II GTNNAC 3 cut(s) 323, 1012, 1107
Hpy188I TCNGA 4 cut(s) 526, 624, 1183, 1266
Hpy8I GTNNAC 3 cut(s) 323, 1012, 1107
Hpy99I CGWCG 7 cut(s) 95, 98, 101, 305, 545, 686, 1229
HpyAV CCTTC 4 cut(s) 361, 575, 700, 1050
HpyCH4III ACNGT 6 cut(s) 180, 376, 398, 517, 803, 1098
HpyCH4IV ACGT 2 cut(s) 777, 1155
HpyCH4V TGCA 9 cut(s) 77, 143, 443, 643, 739, 825, 887, 1075, 1244
HpyF10VI GCNNNNNNNGC 5 cut(s) 1072, 1078, 1081, 1084, 1138
HpyF3I CTNAG 2 cut(s) 831, 905
HpySE526I ACGT 2 cut(s) 777, 1155
HspAI GCGC 1 cut(s) 950
Kpn2I TCCGGA 1 cut(s) 529
KspI CCGCGG 1 cut(s) 638
Kzo9I GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
LmnI GCTCC 4 cut(s) 590, 835, 906, 914
Lsp1109I GCAGC 8 cut(s) 708, 899, 934, 1059, 1087, 1090, 1093, 1096
LweI GCATC 2 cut(s) 86, 630
MaeI CTAG 4 cut(s) 260, 768, 954, 1149
MaeII ACGT 2 cut(s) 777, 1155
MaeIII GTNAC 4 cut(s) 193, 404, 877, 1271
MalI GATC 7 cut(s) 254, 258, 528, 603, 961, 1196, 1263
MbiI CCGCTC 2 cut(s) 210, 1189
MboI GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
MboII GAAGA 8 cut(s) 113, 175, 227, 250, 590, 623, 755, 857
MfeI CAATTG 1 cut(s) 1276
MflI RGATCY 1 cut(s) 526
MhlI GDGCHC 1 cut(s) 765
MluCI AATT 8 cut(s) 72, 151, 668, 746, 1058, 1177, 1201, 1276
MlyI GAGTC 2 cut(s) 291, 643
MmeI TCCRAC 1 cut(s) 647
MnlI CCTC 6 cut(s) 211, 427, 840, 849, 901, 950
MroI TCCGGA 1 cut(s) 529
MseI TTAA 1 cut(s) 390
MspA1I CMGCKG 2 cut(s) 637, 1072
MspI CCGG 3 cut(s) 422, 500, 530
MspR9I CCNGG 2 cut(s) 501, 758
MunI CAATTG 1 cut(s) 1276
MvaI CCWGG 1 cut(s) 758
MvnI CGCG 1 cut(s) 637
MwoI GCNNNNNNNGC 5 cut(s) 1072, 1078, 1081, 1084, 1138
NciI CCSGG 1 cut(s) 501
NcoI CCATGG 2 cut(s) 222, 1170
NdeI CATATG 1 cut(s) 279
NdeII GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
NlaIV GGNNCC 2 cut(s) 586, 837
NmuCI GTSAC 3 cut(s) 404, 877, 1271
NspI RCATGY 1 cut(s) 461
NspV TTCGAA 1 cut(s) 14
PagI TCATGA 5 cut(s) 171, 355, 969, 1029, 1191
PaqCI CACCTGC 1 cut(s) 1249
PciI ACATGT 1 cut(s) 457
PcsI WCGNNNNNNNCGW 4 cut(s) 43, 96, 540, 1224
PfeI GAWTC 8 cut(s) 146, 166, 383, 506, 521, 724, 1145, 1248
PkrI GCNGC 9 cut(s) 698, 889, 949, 1074, 1077, 1080, 1083, 1086, 1188
PleI GAGTC 2 cut(s) 291, 643
PmaCI CACGTG 1 cut(s) 1156
PmlI CACGTG 1 cut(s) 1156
PpsI GAGTC 2 cut(s) 291, 643
Ppu21I YACGTR 1 cut(s) 1156
PscI ACATGT 1 cut(s) 457
Psp6I CCWGG 1 cut(s) 756
PspCI CACGTG 1 cut(s) 1156
PspFI CCCAGC 1 cut(s) 866
PspGI CCWGG 1 cut(s) 756
PspN4I GGNNCC 2 cut(s) 586, 837
PspPI GGNCC 1 cut(s) 869
PstI CTGCAG 2 cut(s) 1077, 1246
PsuI RGATCY 1 cut(s) 526
PvuII CAGCTG 1 cut(s) 1072
RsaI GTAC 4 cut(s) 395, 514, 800, 1100
RsaNI GTAC 4 cut(s) 394, 513, 799, 1099
SacII CCGCGG 1 cut(s) 638
SaqAI TTAA 1 cut(s) 390
SatI GCNGC 9 cut(s) 697, 888, 948, 1073, 1076, 1079, 1082, 1085, 1187
Sau3AI GATC 7 cut(s) 252, 256, 526, 601, 959, 1194, 1261
Sau96I GGNCC 1 cut(s) 869
SbfI CCTGCAGG 1 cut(s) 1246
SchI GAGTC 2 cut(s) 291, 643
ScrFI CCNGG 2 cut(s) 501, 758
SdaI CCTGCAGG 1 cut(s) 1246
SduI GDGCHC 1 cut(s) 765
SfaNI GCATC 2 cut(s) 86, 630
SfcI CTRYAG 2 cut(s) 1073, 1242
Sfr303I CCGCGG 1 cut(s) 638
SfuI TTCGAA 1 cut(s) 14
SgrBI CCGCGG 1 cut(s) 638
SmlI CTYRAG 2 cut(s) 701, 840
SmoI CTYRAG 2 cut(s) 701, 840
Sse8387I CCTGCAGG 1 cut(s) 1246
Sse9I AATT 8 cut(s) 72, 151, 668, 746, 1058, 1177, 1201, 1276
SsiI CCGC 4 cut(s) 210, 635, 637, 1187
SspMI CTAG 4 cut(s) 260, 768, 954, 1149
StyD4I CCNGG 2 cut(s) 499, 756
StyI CCWWGG 2 cut(s) 222, 1170
TaaI ACNGT 6 cut(s) 180, 376, 398, 517, 803, 1098
TaiI ACGT 2 cut(s) 780, 1158
TaqI TCGA 9 cut(s) 14, 24, 255, 300, 386, 466, 684, 1224, 1260
TasI AATT 8 cut(s) 72, 151, 668, 746, 1058, 1177, 1201, 1276
TauI GCSGC 1 cut(s) 1189
TfiI GAWTC 8 cut(s) 146, 166, 383, 506, 521, 724, 1145, 1248
Tru1I TTAA 1 cut(s) 390
Tru9I TTAA 1 cut(s) 390
TscAI CASTG 1 cut(s) 1014
TseFI GTSAC 3 cut(s) 404, 877, 1271
TseI GCWGC 8 cut(s) 696, 887, 947, 1072, 1075, 1078, 1081, 1084
Tsp45I GTSAC 3 cut(s) 404, 877, 1271
TspDTI ATGAA 5 cut(s) 251, 372, 958, 986, 1018
TspRI CASTG 1 cut(s) 1014
XagI CCTNNNNNAGG 1 cut(s) 704
XapI RAATTY 2 cut(s) 668, 1177
XbaI TCTAGA 1 cut(s) 1148
XceI RCATGY 1 cut(s) 461
XmiI GTMKAC 1 cut(s) 1106
XspI CTAG 4 cut(s) 260, 768, 954, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.