Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

690726 .. 691993

Gene Structure 1268 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G01595.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 423 bp

ATGAATATTACCATGATCAACTCGGTTTCAACAGATGTATATAATCAACTTGGCTTGTACACTCCAGCTATCGACGTTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTAACATGGAAGCCATTGTTTCCGGGAAAAAGTGTTGTCCATCAGTTGGAGTTGATTACTGATCTTCTTGGCACACCAAAATCAGATGCAATTTCTGGAGTTCGTAATGATAAAGCTAGAAAATACTTGACTGAAATGAGGAAGAAAAATCATGTCACCTTCTCGCAAAAATTCTCTAAAGCAGATCCATTAGCACTCCGTCTTTTGCAGAGGCTGTTGGCTTTCGATCGACCGACTCCTACAGAGATTCGAAGCCGTGACAAGGGCCACAAAACAAGAGTTGAAATCACCTGCAGAAAAAGAGATAAGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000226 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030865 GO:0031122 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043622 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0097435 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

140

Amino Acids

16.03

Weight (kDa)

9.8

Isoelectric Point (pI)

29.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	20 - 110	1.3e-06	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	407
Acc36I	ACCTGC	1 cut(s)	407
AccB7I	CCANNNNNTGG	1 cut(s)	154
AclWI	GGATC	1 cut(s)	287
AcsI	RAATTY	1 cut(s)	278
AfaI	GTAC	2 cut(s)	59, 108
AfiI	CCNNNNNNNGG	2 cut(s)	154, 370
AgsI	TTSAA	2 cut(s)	30, 392
AluBI	AGCT	2 cut(s)	68, 224
AluI	AGCT	2 cut(s)	68, 224
AlwI	GGATC	1 cut(s)	287
AlwNI	CAGNNNCTG	1 cut(s)	322
AoxI	GGCC	1 cut(s)	373
ApeKI	GCWGC	1 cut(s)	90
ApoI	RAATTY	1 cut(s)	278
AspS9I	GGNCC	1 cut(s)	373
AsuC2I	CCSGG	1 cut(s)	132
AsuHPI	GGTGA	2 cut(s)	256, 388
AsuII	TTCGAA	1 cut(s)	358
BbvI	GCAGC	1 cut(s)	77
BccI	CCATC	1 cut(s)	156
BceAI	ACGGC	1 cut(s)	348
BclI	TGATCA	1 cut(s)	15
BcnI	CCSGG	1 cut(s)	132
BfaI	CTAG	1 cut(s)	225
BfmI	CTRYAG	2 cut(s)	348, 400
BfuAI	ACCTGC	1 cut(s)	407
BisI	GCNGC	1 cut(s)	91
BlsI	GCNGC	1 cut(s)	92
Bme1390I	CCNGG	1 cut(s)	132
BmgT120I	GGNCC	1 cut(s)	373
BmrFI	CCNGG	1 cut(s)	132
BmsI	GCATC	2 cut(s)	102, 184
BpmI	CTGGAG	2 cut(s)	48, 225
Bpu14I	TTCGAA	1 cut(s)	358
BpuMI	CCSGG	1 cut(s)	132
Bsc4I	CCNNNNNNNGG	2 cut(s)	154, 370
BseLI	CCNNNNNNNGG	2 cut(s)	154, 370
BseXI	GCAGC	1 cut(s)	77
Bsh1285I	CGRYCG	2 cut(s)	337, 341
BshFI	GGCC	1 cut(s)	375
BsiEI	CGRYCG	2 cut(s)	337, 341
BsiSI	CCGG	1 cut(s)	131
BslI	CCNNNNNNNGG	2 cut(s)	154, 370
BsnI	GGCC	1 cut(s)	375
Bsp119I	TTCGAA	1 cut(s)	358
Bsp1407I	TGTACA	1 cut(s)	57
Bsp143I	GATC	4 cut(s)	15, 169, 292, 334
BspANI	GGCC	1 cut(s)	375
BspMAI	CTGCAG	1 cut(s)	404
BspMI	ACCTGC	1 cut(s)	407
BspPI	GGATC	1 cut(s)	287
BspT104I	TTCGAA	1 cut(s)	358
BsrGI	TGTACA	1 cut(s)	57
BssMI	GATC	4 cut(s)	15, 169, 292, 334
BstAPI	GCANNNNNTGC	1 cut(s)	90
BstAUI	TGTACA	1 cut(s)	57
BstBI	TTCGAA	1 cut(s)	358
BstKTI	GATC	4 cut(s)	18, 172, 295, 337
BstMBI	GATC	4 cut(s)	15, 169, 292, 334
BstMCI	CGRYCG	2 cut(s)	337, 341
BstMWI	GCNNNNNNNGC	1 cut(s)	90
BstSCI	CCNGG	1 cut(s)	130
BstSFI	CTRYAG	2 cut(s)	348, 400
BstV1I	GCAGC	1 cut(s)	77
BstX2I	RGATCY	1 cut(s)	292
BstYI	RGATCY	1 cut(s)	292
BsuRI	GGCC	1 cut(s)	375
BveI	ACCTGC	1 cut(s)	407
CaiI	CAGNNNCTG	1 cut(s)	322
Cfr13I	GGNCC	1 cut(s)	373
Csp6I	GTAC	2 cut(s)	58, 107
CviAII	CATG	3 cut(s)	13, 114, 260
CviJI	RGCY	9 cut(s)	54, 68, 90, 121, 224, 322, 329, 363, 375
CviKI_1	RGCY	9 cut(s)	54, 68, 90, 121, 224, 322, 329, 363, 375
CviQI	GTAC	2 cut(s)	58, 107
DpnI	GATC	4 cut(s)	17, 171, 294, 336
DpnII	GATC	4 cut(s)	15, 169, 292, 334
FaeI	CATG	3 cut(s)	16, 117, 263
FaiI	YATR	5 cut(s)	14, 40, 42, 115, 261
FatI	CATG	3 cut(s)	12, 113, 259
FbaI	TGATCA	1 cut(s)	15
Fnu4HI	GCNGC	1 cut(s)	91
Fsp4HI	GCNGC	1 cut(s)	91
FspBI	CTAG	1 cut(s)	225
GluI	GCNGC	1 cut(s)	91
GsuI	CTGGAG	2 cut(s)	48, 225
HaeIII	GGCC	1 cut(s)	375
HapII	CCGG	1 cut(s)	131
Hin1II	CATG	3 cut(s)	16, 117, 263
HinfI	GANTC	2 cut(s)	343, 355
HpaII	CCGG	1 cut(s)	131
HphI	GGTGA	2 cut(s)	256, 388
Hpy166II	GTNNAC	1 cut(s)	60
Hpy188I	TCNGA	1 cut(s)	193
Hpy188III	TCNNGA	1 cut(s)	204
Hpy8I	GTNNAC	1 cut(s)	60
Hpy99I	CGWCG	1 cut(s)	77
HpyAV	CCTTC	1 cut(s)	277
HpyCH4IV	ACGT	1 cut(s)	75
HpyCH4V	TGCA	5 cut(s)	93, 101, 197, 316, 402
HpyF10VI	GCNNNNNNNGC	1 cut(s)	90
HpySE526I	ACGT	1 cut(s)	75
Hsp92II	CATG	3 cut(s)	16, 117, 263
Ksp22I	TGATCA	1 cut(s)	15
Kzo9I	GATC	4 cut(s)	15, 169, 292, 334
LmnI	GCTCC	1 cut(s)	81
LpnPI	CCDG	4 cut(s)	78, 144, 189, 412
Lsp1109I	GCAGC	1 cut(s)	77
LweI	GCATC	2 cut(s)	102, 184
MaeI	CTAG	1 cut(s)	225
MaeII	ACGT	1 cut(s)	75
MaeIII	GTNAC	2 cut(s)	262, 365
MalI	GATC	4 cut(s)	17, 171, 294, 336
MboI	GATC	4 cut(s)	15, 169, 292, 334
MboII	GAAGA	2 cut(s)	164, 262
MflI	RGATCY	1 cut(s)	292
MluCI	AATT	2 cut(s)	198, 278
MlyI	GAGTC	1 cut(s)	337
MmeI	TCCRAC	1 cut(s)	135
MnlI	CCTC	3 cut(s)	97, 240, 312
MspI	CCGG	1 cut(s)	131
MspR9I	CCNGG	1 cut(s)	132
MwoI	GCNNNNNNNGC	1 cut(s)	90
NciI	CCSGG	1 cut(s)	132
NdeII	GATC	4 cut(s)	15, 169, 292, 334
NlaIII	CATG	3 cut(s)	16, 117, 263
NmuCI	GTSAC	2 cut(s)	262, 365
NspV	TTCGAA	1 cut(s)	358
PaqCI	CACCTGC	1 cut(s)	407
PfeI	GAWTC	1 cut(s)	355
PflMI	CCANNNNNTGG	1 cut(s)	154
PfoI	TCCNGGA	1 cut(s)	130
PkrI	GCNGC	1 cut(s)	92
Ple19I	CGATCG	1 cut(s)	337
PleI	GAGTC	1 cut(s)	337
PpsI	GAGTC	1 cut(s)	337
PspPI	GGNCC	1 cut(s)	373
PstI	CTGCAG	1 cut(s)	404
PstNI	CAGNNNCTG	1 cut(s)	322
PsuI	RGATCY	1 cut(s)	292
PvuI	CGATCG	1 cut(s)	337
RsaI	GTAC	2 cut(s)	59, 108
RsaNI	GTAC	2 cut(s)	58, 107
SatI	GCNGC	1 cut(s)	91
Sau3AI	GATC	4 cut(s)	15, 169, 292, 334
Sau96I	GGNCC	1 cut(s)	373
SchI	GAGTC	1 cut(s)	337
ScrFI	CCNGG	1 cut(s)	132
SetI	ASST	6 cut(s)	70, 78, 108, 226, 269, 401
SfaNI	GCATC	2 cut(s)	102, 184
SfcI	CTRYAG	2 cut(s)	348, 400
SfuI	TTCGAA	1 cut(s)	358
Sse9I	AATT	2 cut(s)	198, 278
SspI	AATATT	1 cut(s)	7
SspMI	CTAG	1 cut(s)	225
StyD4I	CCNGG	1 cut(s)	130
TaiI	ACGT	1 cut(s)	78
TaqI	TCGA	4 cut(s)	72, 333, 337, 358
TaqII	GACCGA	1 cut(s)	355
TasI	AATT	2 cut(s)	198, 278
TatI	WGTACW	1 cut(s)	57
TfiI	GAWTC	1 cut(s)	355
TseFI	GTSAC	2 cut(s)	262, 365
TseI	GCWGC	1 cut(s)	90
Tsp45I	GTSAC	2 cut(s)	262, 365
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	1 cut(s)	296
Van91I	CCANNNNNTGG	1 cut(s)	154
XapI	RAATTY	1 cut(s)	278
XspI	CTAG	1 cut(s)	225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.