AT4G03635

F-box LRR-repeat protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
N/A
Physical Location & Seq
Forward (+)
1611651 .. 1613117
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03635.1

Sequence Viewer

Length: 267 bp
ATGGTACACTTCGGCAACGATTCTCTCTACTCCTACATCGCCCAAAGATCAAGTAATCTGAGATGCCTTAGGCTTGCAATGTGCTATCCACTAACTGGCAATGGATTTGTCAGTGCAGTCATGAAGCTCTCATTCCTTGAGGAACTCGATATTTCACAGGGCTATACACAACTGGATTTGAAAGCTATAGGCCACTCTTGCCCACTACTGAAGACATTCAAGCTAAACCGTCCTTCTTTCAGCCGGTTCGTTAAATATGATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

9.99

Weight (kDa)

9.15

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 95
AcuI CTGAAG 1 cut(s) 230
AfaI GTAC 1 cut(s) 6
AfiI CCNNNNNNNGG 1 cut(s) 95
AgsI TTSAA 2 cut(s) 181, 220
AluBI AGCT 3 cut(s) 127, 185, 223
AluI AGCT 3 cut(s) 127, 185, 223
AoxI GGCC 1 cut(s) 190
Asp700I GAANNNNTTC 1 cut(s) 215
AxyI CCTNAGG 1 cut(s) 68
BbsI GAAGAC 1 cut(s) 218
BfmI CTRYAG 1 cut(s) 186
BmsI GCATC 2 cut(s) 53, 250
BpiI GAAGAC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 158
Bsc4I CCNNNNNNNGG 1 cut(s) 95
Bse118I RCCGGY 1 cut(s) 243
Bse1I ACTGG 2 cut(s) 100, 177
Bse21I CCTNAGG 1 cut(s) 68
Bse3DI GCAATG 2 cut(s) 84, 106
BseLI CCNNNNNNNGG 1 cut(s) 95
BseMI GCAATG 2 cut(s) 84, 106
BseMII CTCAG 1 cut(s) 50
BseNI ACTGG 2 cut(s) 100, 177
BsgI GTGCAG 1 cut(s) 135
BshFI GGCC 1 cut(s) 192
BsiSI CCGG 1 cut(s) 244
BslI CCNNNNNNNGG 1 cut(s) 95
BsnI GGCC 1 cut(s) 192
Bsp143I GATC 1 cut(s) 47
BspANI GGCC 1 cut(s) 192
BspCNI CTCAG 1 cut(s) 51
BspHI TCATGA 1 cut(s) 120
BsrDI GCAATG 2 cut(s) 84, 106
BsrFI RCCGGY 1 cut(s) 243
BsrI ACTGG 2 cut(s) 100, 177
BssAI RCCGGY 1 cut(s) 243
BssMI GATC 1 cut(s) 47
Bst4CI ACNGT 1 cut(s) 230
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 2 cut(s) 59, 68
BstKTI GATC 1 cut(s) 50
BstMBI GATC 1 cut(s) 47
BstMWI GCNNNNNNNGC 1 cut(s) 198
BstSFI CTRYAG 1 cut(s) 186
BstV2I GAAGAC 1 cut(s) 218
Bsu36I CCTNAGG 1 cut(s) 68
BsuRI GGCC 1 cut(s) 192
BtgZI GCGATG 1 cut(s) 22
BtsIMutI CAGTG 1 cut(s) 118
Cac8I GCNNGC 1 cut(s) 75
CciI TCATGA 1 cut(s) 120
Cfr10I RCCGGY 1 cut(s) 243
Csp6I GTAC 1 cut(s) 5
CviAII CATG 1 cut(s) 121
CviJI RGCY 7 cut(s) 73, 127, 162, 185, 192, 223, 243
CviKI_1 RGCY 7 cut(s) 73, 127, 162, 185, 192, 223, 243
CviQI GTAC 1 cut(s) 5
DdeI CTNAG 2 cut(s) 59, 68
DpnI GATC 1 cut(s) 49
DpnII GATC 1 cut(s) 47
Eco57I CTGAAG 1 cut(s) 230
Eco81I CCTNAGG 1 cut(s) 68
EcoT22I ATGCAT 1 cut(s) 265
FaeI CATG 1 cut(s) 124
FaiI YATR 5 cut(s) 122, 165, 188, 258, 265
FatI CATG 1 cut(s) 120
HaeIII GGCC 1 cut(s) 192
HapII CCGG 1 cut(s) 244
Hin1II CATG 1 cut(s) 124
HinfI GANTC 1 cut(s) 20
HpaII CCGG 1 cut(s) 244
Hpy166II GTNNAC 1 cut(s) 7
Hpy188I TCNGA 1 cut(s) 60
Hpy188III TCNNGA 1 cut(s) 121
Hpy8I GTNNAC 1 cut(s) 7
HpyAV CCTTC 1 cut(s) 243
HpyCH4III ACNGT 1 cut(s) 230
HpyCH4V TGCA 3 cut(s) 77, 116, 263
HpyF10VI GCNNNNNNNGC 1 cut(s) 198
HpyF3I CTNAG 2 cut(s) 59, 68
Hsp92II CATG 1 cut(s) 124
Kzo9I GATC 1 cut(s) 47
LpnPI CCDG 4 cut(s) 81, 143, 158, 257
LweI GCATC 2 cut(s) 53, 250
MalI GATC 1 cut(s) 49
MboI GATC 1 cut(s) 47
MboII GAAGA 1 cut(s) 223
MnlI CCTC 1 cut(s) 133
Mph1103I ATGCAT 1 cut(s) 265
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 1 cut(s) 252
MspI CCGG 1 cut(s) 244
MwoI GCNNNNNNNGC 1 cut(s) 198
NdeII GATC 1 cut(s) 47
NlaIII CATG 1 cut(s) 124
NsiI ATGCAT 1 cut(s) 265
PagI TCATGA 1 cut(s) 120
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 1 cut(s) 20
PflMI CCANNNNNTGG 1 cut(s) 95
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SaqAI TTAA 1 cut(s) 252
Sau3AI GATC 1 cut(s) 47
SetI ASST 3 cut(s) 129, 187, 225
SfaNI GCATC 2 cut(s) 53, 250
SfcI CTRYAG 1 cut(s) 186
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
TaaI ACNGT 1 cut(s) 230
TaqI TCGA 1 cut(s) 147
TfiI GAWTC 1 cut(s) 20
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
TscAI CASTG 1 cut(s) 118
TspDTI ATGAA 1 cut(s) 137
TspRI CASTG 1 cut(s) 118
Van91I CCANNNNNTGG 1 cut(s) 95
XmnI GAANNNNTTC 1 cut(s) 215
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.