Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

7126661 .. 7128103

Gene Structure 1443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G11845.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 462 bp

ATGAATTATGAGGAGATATGCGTCGGATCCGATCTGTCGTTATATTCATTTCAACGTCGGTGGAGACCCTCGACGATTTCAAATCGGAGAGTATGCTCCAATCTATTTCCCATGGATGGGAATCCCAGGTTGTCTTGCTTTGGACTCATGAAAAGTAGCAGAGATGGGAAGAGTTATATAGCACTAACTTGGCATTTACTCCTACAGAGAAATTTGCTAACGGAGTTACACCAGAGAGTGTATTATGTTTTCAGTTTTGGAACCGTTTTGCTCGATCTCATTAGTGGAAAACATATTCCACCGAGCCATCCATACAGGAAATACTGCTTAAGAATGGATCTTACAGCCATACAGGAAATACTTAGTAAGATTGGATACAAGGAATTGCCATTGAGCTCTCGTTTCAAATGTGGACAACCCAGATGCAGGAATCTCTCTTTTCAAAGAAGCAAGGGGACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

153

Amino Acids

17.84

Weight (kDa)

9.85

Isoelectric Point (pI)

48.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	3 cut(s)	21, 34, 345
AcsI	RAATTY	1 cut(s)	211
AfiI	CCNNNNNNNGG	3 cut(s)	116, 117, 426
AflII	CTTAAG	1 cut(s)	328
AgsI	TTSAA	4 cut(s)	53, 81, 406, 443
AjnI	CCWGG	1 cut(s)	125
AluBI	AGCT	1 cut(s)	396
AluI	AGCT	1 cut(s)	396
Alw21I	GWGCWC	1 cut(s)	398
Alw26I	GTCTC	1 cut(s)	58
AlwI	GGATC	3 cut(s)	21, 34, 345
ApoI	RAATTY	1 cut(s)	211
BamHI	GGATCC	1 cut(s)	26
BanII	GRGCYC	1 cut(s)	398
Bbv12I	GWGCWC	1 cut(s)	398
BccI	CCATC	3 cut(s)	110, 158, 315
BciT130I	CCWGG	1 cut(s)	127
BciVI	GTATCC	1 cut(s)	368
BcoDI	GTCTC	1 cut(s)	58
BfmI	CTRYAG	1 cut(s)	203
BfrI	CTTAAG	1 cut(s)	328
BfuI	GTATCC	1 cut(s)	368
Bme1390I	CCNGG	1 cut(s)	127
BmiI	GGNNCC	2 cut(s)	28, 262
BmrFI	CCNGG	1 cut(s)	127
BmsI	GCATC	1 cut(s)	413
BsaBI	GATNNNNATC	1 cut(s)	120
BsaI	GGTCTC	1 cut(s)	58
BsaJI	CCNNGG	2 cut(s)	111, 125
Bsc4I	CCNNNNNNNGG	3 cut(s)	116, 117, 426
Bse8I	GATNNNNATC	1 cut(s)	120
BseBI	CCWGG	1 cut(s)	127
BseDI	CCNNGG	2 cut(s)	111, 125
BseGI	GGATG	2 cut(s)	121, 307
BseJI	GATNNNNATC	1 cut(s)	120
BseLI	CCNNNNNNNGG	3 cut(s)	116, 117, 426
BseRI	GAGGAG	1 cut(s)	26
BsiHKAI	GWGCWC	1 cut(s)	398
BslI	CCNNNNNNNGG	3 cut(s)	116, 117, 426
BsmAI	GTCTC	1 cut(s)	58
Bso31I	GGTCTC	1 cut(s)	58
Bsp1286I	GDGCHC	1 cut(s)	398
Bsp143I	GATC	4 cut(s)	26, 31, 274, 337
Bsp19I	CCATGG	1 cut(s)	111
BspHI	TCATGA	1 cut(s)	147
BspLI	GGNNCC	2 cut(s)	28, 262
BspPI	GGATC	3 cut(s)	21, 34, 345
BspTI	CTTAAG	1 cut(s)	328
BspTNI	GGTCTC	1 cut(s)	58
BssECI	CCNNGG	2 cut(s)	111, 125
BssMI	GATC	4 cut(s)	26, 31, 274, 337
BssT1I	CCWWGG	1 cut(s)	111
Bst2UI	CCWGG	1 cut(s)	127
Bst4CI	ACNGT	1 cut(s)	265
Bst6I	CTCTTC	1 cut(s)	164
BstAFI	CTTAAG	1 cut(s)	328
BstDEI	CTNAG	2 cut(s)	362, 459
BstDSI	CCRYGG	1 cut(s)	111
BstF5I	GGATG	2 cut(s)	121, 307
BstKTI	GATC	4 cut(s)	29, 34, 277, 340
BstMAI	GTCTC	1 cut(s)	58
BstMBI	GATC	4 cut(s)	26, 31, 274, 337
BstNI	CCWGG	1 cut(s)	127
BstSCI	CCNGG	1 cut(s)	125
BstSFI	CTRYAG	1 cut(s)	203
BstX2I	RGATCY	2 cut(s)	26, 337
BstYI	RGATCY	2 cut(s)	26, 337
BsuI	GTATCC	1 cut(s)	368
BtgI	CCRYGG	1 cut(s)	111
BtsCI	GGATG	2 cut(s)	121, 307
CciI	TCATGA	1 cut(s)	147
CseI	GACGC	1 cut(s)	10
CspCI	CAANNNNNGTGG	2 cut(s)	41, 76
CviAII	CATG	2 cut(s)	112, 148
CviJI	RGCY	3 cut(s)	306, 347, 396
CviKI_1	RGCY	3 cut(s)	306, 347, 396
DdeI	CTNAG	2 cut(s)	362, 459
DpnI	GATC	4 cut(s)	28, 33, 276, 339
DpnII	GATC	4 cut(s)	26, 31, 274, 337
Eam1104I	CTCTTC	1 cut(s)	164
EarI	CTCTTC	1 cut(s)	164
Ecl136II	GAGCTC	1 cut(s)	396
Eco130I	CCWWGG	1 cut(s)	111
Eco24I	GRGCYC	1 cut(s)	398
Eco31I	GGTCTC	1 cut(s)	58
Eco53kI	GAGCTC	1 cut(s)	396
EcoICRI	GAGCTC	1 cut(s)	396
EcoRII	CCWGG	1 cut(s)	125
EcoT14I	CCWWGG	1 cut(s)	111
EcoT38I	GRGCYC	1 cut(s)	398
ErhI	CCWWGG	1 cut(s)	111
FaeI	CATG	2 cut(s)	115, 151
FatI	CATG	2 cut(s)	111, 147
FokI	GGATG	2 cut(s)	128, 294
FriOI	GRGCYC	1 cut(s)	398
HgaI	GACGC	1 cut(s)	10
Hin1II	CATG	2 cut(s)	115, 151
HinfI	GANTC	3 cut(s)	121, 144, 430
Hpy166II	GTNNAC	1 cut(s)	413
Hpy188I	TCNGA	3 cut(s)	26, 31, 87
Hpy188III	TCNNGA	1 cut(s)	148
Hpy8I	GTNNAC	1 cut(s)	413
Hpy99I	CGWCG	3 cut(s)	26, 60, 76
HpyCH4III	ACNGT	1 cut(s)	265
HpyCH4IV	ACGT	1 cut(s)	55
HpyCH4V	TGCA	1 cut(s)	426
HpyF3I	CTNAG	2 cut(s)	362, 459
HpySE526I	ACGT	1 cut(s)	55
Hsp92II	CATG	2 cut(s)	115, 151
Kzo9I	GATC	4 cut(s)	26, 31, 274, 337
LmnI	GCTCC	1 cut(s)	101
LpnPI	CCDG	7 cut(s)	112, 139, 245, 301, 338, 412, 433
LweI	GCATC	1 cut(s)	413
MaeII	ACGT	1 cut(s)	55
MaeIII	GTNAC	1 cut(s)	225
MalI	GATC	4 cut(s)	28, 33, 276, 339
MboI	GATC	4 cut(s)	26, 31, 274, 337
MboII	GAAGA	1 cut(s)	181
MflI	RGATCY	2 cut(s)	26, 337
MhlI	GDGCHC	1 cut(s)	398
MluCI	AATT	3 cut(s)	4, 211, 383
MlyI	GAGTC	1 cut(s)	138
MmeI	TCCRAC	1 cut(s)	4
MnlI	CCTC	2 cut(s)	4, 79
MseI	TTAA	1 cut(s)	329
MspCI	CTTAAG	1 cut(s)	328
MspR9I	CCNGG	1 cut(s)	127
MvaI	CCWGG	1 cut(s)	127
NcoI	CCATGG	1 cut(s)	111
NdeII	GATC	4 cut(s)	26, 31, 274, 337
NlaIII	CATG	2 cut(s)	115, 151
NlaIV	GGNNCC	2 cut(s)	28, 262
PagI	TCATGA	1 cut(s)	147
PfeI	GAWTC	2 cut(s)	121, 430
PleI	GAGTC	1 cut(s)	138
PpsI	GAGTC	1 cut(s)	138
Psp124BI	GAGCTC	1 cut(s)	398
Psp6I	CCWGG	1 cut(s)	125
PspGI	CCWGG	1 cut(s)	125
PspN4I	GGNNCC	2 cut(s)	28, 262
PsuI	RGATCY	2 cut(s)	26, 337
SacI	GAGCTC	1 cut(s)	398
SaqAI	TTAA	1 cut(s)	329
Sau3AI	GATC	4 cut(s)	26, 31, 274, 337
SchI	GAGTC	1 cut(s)	138
ScrFI	CCNGG	1 cut(s)	127
SduI	GDGCHC	1 cut(s)	398
SetI	ASST	3 cut(s)	58, 131, 398
SfaNI	GCATC	1 cut(s)	413
SfcI	CTRYAG	1 cut(s)	203
SmlI	CTYRAG	1 cut(s)	328
SmoI	CTYRAG	1 cut(s)	328
Sse9I	AATT	3 cut(s)	4, 211, 383
SstI	GAGCTC	1 cut(s)	398
StyD4I	CCNGG	1 cut(s)	125
StyI	CCWWGG	1 cut(s)	111
TaaI	ACNGT	1 cut(s)	265
TaiI	ACGT	1 cut(s)	58
TaqI	TCGA	2 cut(s)	71, 273
TasI	AATT	3 cut(s)	4, 211, 383
TfiI	GAWTC	2 cut(s)	121, 430
Tru1I	TTAA	1 cut(s)	329
Tru9I	TTAA	1 cut(s)	329
TspDTI	ATGAA	3 cut(s)	17, 36, 164
TspGWI	ACGGA	1 cut(s)	236
Vha464I	CTTAAG	1 cut(s)	328
XapI	RAATTY	1 cut(s)	211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.