AT4G36570
MYB Family

ubiquitin modification-dependent histone binding

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
N/A
Physical Location & Seq
Forward (+)
17254290 .. 17255762
1473 bp
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UTR
Exon/CDS
Intron
AT4G36570.1

Sequence Viewer

Length: 177 bp
ATGGCTTCCAACTCAATGAGCTCTAGCGCTTCTTGGACACGTAAGGAGAACAAATTATTTGAAAGGGCGTTGGCTACATATGACCAGGACACTCCTGACCGTTGGCATAACGTTGCAAGAGCCGTTGGCGGCAAATCAGCTGAAGAAGTAAGGCGACACTACGAGCCTCCTCATTAG

Protein Analysis

58

Amino Acids

6.66

Weight (kDa)

8.2

Isoelectric Point (pI)

77.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding_2 PF23082 11 - 52 3.6e-08 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 11 - 54 5.6e-08 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 129
AclI AACGTT 1 cut(s) 111
AcuI CTGAAG 1 cut(s) 162
AfeI AGCGCT 1 cut(s) 28
AflIII ACRYGT 1 cut(s) 38
AgsI TTSAA 1 cut(s) 62
AjnI CCWGG 1 cut(s) 84
AluBI AGCT 2 cut(s) 21, 140
AluI AGCT 2 cut(s) 21, 140
Alw21I GWGCWC 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 28
AspLEI GCGC 1 cut(s) 29
BanII GRGCYC 1 cut(s) 23
Bbv12I GWGCWC 1 cut(s) 23
BceAI ACGGC 1 cut(s) 107
BciT130I CCWGG 1 cut(s) 86
BfaI CTAG 1 cut(s) 24
BfoI RGCGCY 1 cut(s) 30
BisI GCNGC 1 cut(s) 130
BlsI GCNGC 1 cut(s) 131
Bme1390I CCNGG 1 cut(s) 86
BmrFI CCNGG 1 cut(s) 86
BsaAI YACGTR 1 cut(s) 41
BseBI CCWGG 1 cut(s) 86
BseRI GAGGAG 1 cut(s) 159
BsiHKAI GWGCWC 1 cut(s) 23
Bsp1286I GDGCHC 1 cut(s) 23
BspACI CCGC 1 cut(s) 129
Bst2UI CCWGG 1 cut(s) 86
Bst4CI ACNGT 1 cut(s) 101
BstBAI YACGTR 1 cut(s) 41
BstH2I RGCGCY 1 cut(s) 30
BstHHI GCGC 1 cut(s) 29
BstNI CCWGG 1 cut(s) 86
BstSCI CCNGG 1 cut(s) 84
CfoI GCGC 1 cut(s) 29
CviJI RGCY 6 cut(s) 5, 21, 74, 122, 140, 166
CviKI_1 RGCY 6 cut(s) 5, 21, 74, 122, 140, 166
Ecl136II GAGCTC 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 23
Eco47III AGCGCT 1 cut(s) 28
Eco53kI GAGCTC 1 cut(s) 21
Eco57I CTGAAG 1 cut(s) 162
EcoICRI GAGCTC 1 cut(s) 21
EcoRII CCWGG 1 cut(s) 84
EcoT38I GRGCYC 1 cut(s) 23
FaiI YATR 3 cut(s) 79, 81, 108
FauNDI CATATG 1 cut(s) 79
Fnu4HI GCNGC 1 cut(s) 130
FriOI GRGCYC 1 cut(s) 23
Fsp4HI GCNGC 1 cut(s) 130
FspBI CTAG 1 cut(s) 24
GlaI GCGC 1 cut(s) 28
GluI GCNGC 1 cut(s) 130
HaeII RGCGCY 1 cut(s) 30
HhaI GCGC 1 cut(s) 29
Hin6I GCGC 1 cut(s) 27
HinP1I GCGC 1 cut(s) 27
Hpy188III TCNNGA 1 cut(s) 95
HpyCH4III ACNGT 1 cut(s) 101
HpyCH4IV ACGT 2 cut(s) 40, 111
HpyCH4V TGCA 1 cut(s) 116
HpySE526I ACGT 2 cut(s) 40, 111
HspAI GCGC 1 cut(s) 27
LpnPI CCDG 3 cut(s) 71, 98, 108
MaeI CTAG 1 cut(s) 24
MaeII ACGT 2 cut(s) 40, 111
MboII GAAGA 1 cut(s) 155
MhlI GDGCHC 1 cut(s) 23
MluCI AATT 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 33
MnlI CCTC 1 cut(s) 177
MspA1I CMGCKG 1 cut(s) 140
MspR9I CCNGG 1 cut(s) 86
MvaI CCWGG 1 cut(s) 86
NdeI CATATG 1 cut(s) 79
PkrI GCNGC 1 cut(s) 131
Ppu21I YACGTR 1 cut(s) 41
Psp124BI GAGCTC 1 cut(s) 23
Psp1406I AACGTT 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 84
PspGI CCWGG 1 cut(s) 84
PvuII CAGCTG 1 cut(s) 140
SacI GAGCTC 1 cut(s) 23
SatI GCNGC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 86
SduI GDGCHC 1 cut(s) 23
SetI ASST 4 cut(s) 23, 43, 114, 142
SgeI CNNG 7 cut(s) 36, 45, 51, 97, 98, 107, 129
Sse9I AATT 1 cut(s) 53
SsiI CCGC 1 cut(s) 129
SspMI CTAG 1 cut(s) 24
SstI GAGCTC 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 84
TaaI ACNGT 1 cut(s) 101
TaiI ACGT 2 cut(s) 43, 114
TasI AATT 1 cut(s) 53
TauI GCSGC 1 cut(s) 132
XspI CTAG 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.