AT5G03140

lectin protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
N/A
Physical Location & Seq
Reverse (-)
737468 .. 740319
2852 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G03140.1

Sequence Viewer

Length: 2136 bp
ATGTTGAAACTTCCTCCGAGATTCTTCTCTGTTTACTCAACTCTCATCCACATTCTTGCCTCCTTCCTCTGCTCCTCCGACGTCAGAGGCGATTTCCCGGCGACGAGATTCGATCTCGGAACGTTGACTCTCTCAAGCCTCAAACTTCTCGGCGATGCTCATCTCAACAACGGAACTATTAAGCTCACTCGTGAACTCTCTGTTCCCACTTCCACCGCCGGAAAAGCTCTTTATGGGAAACCGGTAAAATTCCGGCACCCGGAAACTAAATCTCCGGCGAGTTTCACTACTTACTTCTCCTTCTCGGTAACGAATCTCAATCCTTCCTCAATTGGCGGTGGATTAGCTTTCGTAATCTCCCCTGATGAAGATTACTTAGGATCCACCGGTGGATTTCTCGGTCTAACCGAAGAAACCGGATCCGGGTCGGGTTTTGTGGCGGTTGAATTCGATACGTTAATGGATGTGCAATTCAAAGACGTTAACGGGAACCACGTGGGATTGGATCTAAACGCCGTCGTTTCAGCCGCGGTAGCCGATTTGGGAAACGTCGACATCGATCTCAAGAGCGGAAACGCCGTGAATTCATGGATCACTTATGACGGGTCGGGTCGGGTTTTAACAGTTTACGTCTCTTACTCAAACTTGAAACCTAAATCGCCGATTTTGTCGGTTCCTCTCGATCTTGATCGTTACGTAAGCGATTCAATGTTTGTTGGATTCTCTGGATCAACACAAGGAAGCACTGAGATTCACAGTGTCGATTGGTGGAGCTTTAGTTCATCTTTCGAAGAATCATCGGAATCACCACCGCCGATGCCTAATTCTCCTCCTCCGTCGTCACCGTCTTCATCAATCACACCATCCCTATCCACCGTCCGGAGAAAAACCGCCGATCCATCGTCCTCTTGCCGTAACAAACTCTGTAAAAAATCACCAGCCGCCGTCGCCGGAGTAGTAACCGCCGGAGCATTTTTCTTAGCATTATTCGCCGGAGTGATAATCTGGGTTTACTCTAAAAAGATCAAATACACTCGAAAGTCTGAATCTTTAGCATCGGAAATAATGAAATCGCCGAGAGAGTTCACTTACAAGGAGCTGAAATTAGCCACCGACTGTTTCAGCTCATCGAGAGTCATCGGAAACGGAGCATTCGGCACCGTCTACAAAGGAATCTTACAAGATTCCGGCGAAATTATCGCAATCAAAAGATGCAGCCACATTTCTCAAGGAAACACAGAATTCTTATCGGAATTATCTCTAATCGGAACCCTCCGTCACCGGAATCTTCTCCGTCTTCAAGGCTATTGCAGAGAAAAAGGCGAAATTCTGTTAATTTATGATCTAATGCCTAATGGATCACTTGATAAAGCACTCTACGAGTCTCCGACTACATTACCCTGGCCTCACCGGAGAAAAATACTTCTTGGAGTCGCTTCTGCTTTGGCTTATTTGCATCAAGAGTGCGAGAATCAGATCATTCACCGTGATGTTAAAACAAGTAACATTATGCTCGACGCGAATTTTAATCCGAAGTTAGGTGATTTTGGACTCGCGAGGCAAACGGAGCACGATAAATCGCCGGACGCAACCGCCGCCGCTGGAACAATGGGGTATTTAGCGCCGGAGTATTTGTTAACCGGTCGAGCGACGGAGAAAACCGACGTTTTTAGCTACGGAGCCGTTGTTTTAGAAGTATGCACTGGTAGAAGACCCATAACCCGACCCGAACCGGAACCCGGTTTAAGACCCGGTTTGAGGTCGAGTTTGGTAGATTGGGTTTGGGGTTTGTATAGAGAAGGGAAGTTATTGACCGCCGTGGACGAGCGGTTGAGTGAGTTTAACCCGGAGGAGATGAGTCGGGTTATGATGGTGGGCCTTGCTTGTTCACAACCCGATCCGGTCACCAGGCCCACTATGAGAAGTGTGGTTCAGATTCTTGTTGGTGAAGCTGATGTGCCGGAAGTTCCGATTGCGAAACCGTCGTCGTCGATGAGTTTTAGTACGTCGGAGTTATTGCTTACGTTACAAGACAGTGTATCGGACTGTAATGAAGTTTTGGCTCCGATTTCAACGACTTCTTGTTCCTCGTCGGAACACGACATCTTCATTGTCGGCAAGGACCGATCGGTTTGA

Protein Analysis

711

Amino Acids

77.12

Weight (kDa)

6.02

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 45 - 268 1.4e-62 Legume lectin domain
Lectin_L-type_dom PF18483 50 - 254 4.9e-06 Legume lectin beta-barrel domain
Pkinase PF00069 375 - 588 1.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 377 - 647 8.1e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 84
AccB1I GGYRCC 2 cut(s) 255, 1157
AccBSI CCGCTC 2 cut(s) 570, 1828
AccI GTMKAC 2 cut(s) 552, 1164
AccII CGCG 3 cut(s) 530, 1520, 1556
AccIII TCCGGA 1 cut(s) 879
AclI AACGTT 1 cut(s) 122
AcsI RAATTY 6 cut(s) 248, 446, 583, 1241, 1326, 1522
AcvI CACGTG 1 cut(s) 496
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 1 cut(s) 2005
AfiI CCNNNNNNNGG 6 cut(s) 259, 423, 879, 1538, 1739, 1758
AgeI ACCGGT 3 cut(s) 241, 386, 1640
AgsI TTSAA 7 cut(s) 7, 446, 475, 649, 708, 1301, 2073
AjnI CCWGG 2 cut(s) 1400, 1907
AloI GAACNNNNNNTCC 2 cut(s) 763, 795
AluBI AGCT 8 cut(s) 184, 227, 347, 774, 1099, 1125, 1674, 1952
AluI AGCT 8 cut(s) 184, 227, 347, 774, 1099, 1125, 1674, 1952
Alw21I GWGCWC 1 cut(s) 1572
Alw26I GTCTC 2 cut(s) 637, 1389
Aor13HI TCCGGA 1 cut(s) 879
AoxI GGCC 3 cut(s) 1403, 1876, 1910
ApeKI GCWGC 1 cut(s) 1215
ApoI RAATTY 6 cut(s) 248, 446, 583, 1241, 1326, 1522
ArsI GACNNNNNNTTYG 2 cut(s) 1970, 2002
AsiGI ACCGGT 3 cut(s) 241, 386, 1640
AspLEI GCGC 1 cut(s) 1624
AspS9I GGNCC 3 cut(s) 1876, 1911, 2122
AsuC2I CCSGG 6 cut(s) 98, 260, 424, 1740, 1752, 1847
AsuHPI GGTGA 9 cut(s) 798, 834, 927, 1271, 1400, 1475, 1553, 1897, 1958
AsuII TTCGAA 1 cut(s) 789
AvaII GGWCC 1 cut(s) 2122
BamHI GGATCC 2 cut(s) 380, 419
BanI GGYRCC 2 cut(s) 255, 1157
BauI CACGAG 1 cut(s) 189
BbrPI CACGTG 1 cut(s) 496
BbsI GAAGAC 3 cut(s) 840, 1289, 1717
Bbv12I GWGCWC 1 cut(s) 1572
BbvI GCAGC 1 cut(s) 1227
BccI CCATC 3 cut(s) 871, 907, 1864
BceAI ACGGC 6 cut(s) 500, 563, 897, 929, 1667, 1802
BciT130I CCWGG 2 cut(s) 1402, 1909
BcnI CCSGG 6 cut(s) 98, 260, 424, 1740, 1752, 1847
BcoDI GTCTC 2 cut(s) 637, 1389
BfoI RGCGCY 1 cut(s) 1625
BisI GCNGC 5 cut(s) 528, 942, 1216, 1596, 1599
BlsI GCNGC 5 cut(s) 529, 943, 1217, 1597, 1600
Bme1390I CCNGG 8 cut(s) 98, 260, 424, 1402, 1740, 1752, 1847, 1909
Bme18I GGWCC 1 cut(s) 2122
BmgT120I GGNCC 3 cut(s) 1876, 1911, 2122
BmrFI CCNGG 8 cut(s) 98, 260, 424, 1402, 1740, 1752, 1847, 1909
BmsI GCATC 5 cut(s) 145, 807, 1064, 1202, 1465
BpiI GAAGAC 3 cut(s) 840, 1289, 1717
Bpu14I TTCGAA 1 cut(s) 789
BpuEI CTTGAG 3 cut(s) 118, 548, 1212
BpuMI CCSGG 6 cut(s) 98, 260, 424, 1740, 1752, 1847
Bsa29I ATCGAT 1 cut(s) 558
BsaAI YACGTR 2 cut(s) 496, 697
BsaBI GATNNNNATC 2 cut(s) 159, 687
BsaHI GRCGYC 1 cut(s) 81
BsaJI CCNNGG 3 cut(s) 528, 1400, 1818
BsaWI WCCGGW 9 cut(s) 241, 386, 416, 879, 1281, 1410, 1640, 1732, 1900
BsaXI ACNNNNNCTCC 8 cut(s) 256, 286, 763, 793, 1619, 1649, 1671, 1701
Bsc4I CCNNNNNNNGG 6 cut(s) 259, 423, 879, 1538, 1739, 1758
Bse118I RCCGGY 3 cut(s) 241, 386, 1640
Bse1I ACTGG 1 cut(s) 1708
Bse8I GATNNNNATC 2 cut(s) 159, 687
BseAI TCCGGA 1 cut(s) 879
BseBI CCWGG 2 cut(s) 1402, 1909
BseCI ATCGAT 1 cut(s) 558
BseDI CCNNGG 3 cut(s) 528, 1400, 1818
BseGI GGATG 3 cut(s) 45, 469, 863
BseJI GATNNNNATC 2 cut(s) 159, 687
BseLI CCNNNNNNNGG 6 cut(s) 259, 423, 879, 1538, 1739, 1758
BseMII CTCAG 1 cut(s) 738
BseNI ACTGG 1 cut(s) 1708
BseRI GAGGAG 4 cut(s) 64, 819, 822, 1865
BseXI GCAGC 1 cut(s) 1227
Bsh1236I CGCG 3 cut(s) 530, 1520, 1556
Bsh1285I CGRYCG 2 cut(s) 1645, 2129
BshFI GGCC 3 cut(s) 1405, 1878, 1912
BshNI GGYRCC 2 cut(s) 255, 1157
BshTI ACCGGT 3 cut(s) 241, 386, 1640
BshVI ATCGAT 1 cut(s) 558
BsiEI CGRYCG 2 cut(s) 1645, 2129
BsiHKAI GWGCWC 1 cut(s) 1572
BslI CCNNNNNNNGG 6 cut(s) 259, 423, 879, 1538, 1739, 1758
BsmAI GTCTC 2 cut(s) 637, 1389
BsmBI CGTCTC 1 cut(s) 637
BsmI GAATGC 1 cut(s) 1151
BsnI GGCC 3 cut(s) 1405, 1878, 1912
Bsp119I TTCGAA 1 cut(s) 789
Bsp1286I GDGCHC 1 cut(s) 1572
Bsp13I TCCGGA 1 cut(s) 879
Bsp68I TCGCGA 1 cut(s) 1556
BspANI GGCC 3 cut(s) 1405, 1878, 1912
BspCNI CTCAG 1 cut(s) 739
BspDI ATCGAT 1 cut(s) 558
BspEI TCCGGA 1 cut(s) 879
BspFNI CGCG 3 cut(s) 530, 1520, 1556
BspT104I TTCGAA 1 cut(s) 789
BspT107I GGYRCC 2 cut(s) 255, 1157
BsrBI CCGCTC 2 cut(s) 570, 1828
BsrFI RCCGGY 3 cut(s) 241, 386, 1640
BsrI ACTGG 1 cut(s) 1708
BssAI RCCGGY 3 cut(s) 241, 386, 1640
BssECI CCNNGG 3 cut(s) 528, 1400, 1818
BssNI GRCGYC 1 cut(s) 81
BssSI CACGAG 1 cut(s) 189
Bst2BI CACGAG 1 cut(s) 189
Bst2UI CCWGG 2 cut(s) 1402, 1909
BstACI GRCGYC 1 cut(s) 81
BstBAI YACGTR 2 cut(s) 496, 697
BstBI TTCGAA 1 cut(s) 789
BstDEI CTNAG 3 cut(s) 376, 747, 979
BstDSI CCRYGG 2 cut(s) 528, 1818
BstEII GGTNACC 1 cut(s) 1903
BstF5I GGATG 3 cut(s) 45, 469, 863
BstFNI CGCG 3 cut(s) 530, 1520, 1556
BstH2I RGCGCY 1 cut(s) 1625
BstHHI GCGC 1 cut(s) 1624
BstMAI GTCTC 2 cut(s) 637, 1389
BstMCI CGRYCG 2 cut(s) 1645, 2129
BstMWI GCNNNNNNNGC 6 cut(s) 224, 533, 947, 989, 1567, 1595
BstNI CCWGG 2 cut(s) 1402, 1909
BstPI GGTNACC 1 cut(s) 1903
BstSCI CCNGG 8 cut(s) 96, 258, 422, 1400, 1738, 1750, 1845, 1907
BstSNI TACGTA 1 cut(s) 697
BstUI CGCG 3 cut(s) 530, 1520, 1556
BstV1I GCAGC 1 cut(s) 1227
BstV2I GAAGAC 3 cut(s) 840, 1289, 1717
BstX2I RGATCY 3 cut(s) 380, 419, 505
BstYI RGATCY 3 cut(s) 380, 419, 505
Bsu15I ATCGAT 1 cut(s) 558
BsuRI GGCC 3 cut(s) 1405, 1878, 1912
BsuTUI ATCGAT 1 cut(s) 558
BtgI CCRYGG 2 cut(s) 528, 1818
BtgZI GCGATG 1 cut(s) 168
BtsCI GGATG 3 cut(s) 45, 469, 863
BtsIMutI CAGTG 4 cut(s) 744, 763, 1701, 2041
BtuMI TCGCGA 1 cut(s) 1556
CfoI GCGC 1 cut(s) 1624
Cfr10I RCCGGY 3 cut(s) 241, 386, 1640
Cfr13I GGNCC 3 cut(s) 1876, 1911, 2122
Cfr42I CCGCGG 1 cut(s) 531
ClaI ATCGAT 1 cut(s) 558
CseI GACGC 2 cut(s) 1526, 1595
Csp6I GTAC 1 cut(s) 2004
CspAI ACCGGT 3 cut(s) 241, 386, 1640
CviAII CATG 1 cut(s) 588
CviQI GTAC 1 cut(s) 2004
DdeI CTNAG 3 cut(s) 376, 747, 979
Eco105I TACGTA 1 cut(s) 697
Eco47I GGWCC 1 cut(s) 2122
Eco72I CACGTG 1 cut(s) 496
Eco91I GGTNACC 1 cut(s) 1903
EcoO65I GGTNACC 1 cut(s) 1903
EcoRI GAATTC 3 cut(s) 446, 583, 1241
EcoRII CCWGG 2 cut(s) 1400, 1907
Esp3I CGTCTC 1 cut(s) 637
FaeI CATG 1 cut(s) 591
FatI CATG 1 cut(s) 587
FblI GTMKAC 2 cut(s) 552, 1164
Fnu4HI GCNGC 5 cut(s) 528, 942, 1216, 1596, 1599
FokI GGATG 3 cut(s) 32, 476, 850
Fsp4HI GCNGC 5 cut(s) 528, 942, 1216, 1596, 1599
GlaI GCGC 1 cut(s) 1623
GluI GCNGC 5 cut(s) 528, 942, 1216, 1596, 1599
HaeII RGCGCY 1 cut(s) 1625
HaeIII GGCC 3 cut(s) 1405, 1878, 1912
HgaI GACGC 2 cut(s) 1526, 1595
HhaI GCGC 1 cut(s) 1624
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 1 cut(s) 591
Hin6I GCGC 1 cut(s) 1622
HinP1I GCGC 1 cut(s) 1622
HincII GTYRAC 4 cut(s) 126, 484, 553, 1638
HindII GTYRAC 4 cut(s) 126, 484, 553, 1638
HpaI GTTAAC 2 cut(s) 484, 1638
HphI GGTGA 9 cut(s) 798, 834, 927, 1271, 1400, 1475, 1553, 1897, 1958
Hpy188III TCNNGA 9 cut(s) 191, 565, 680, 686, 726, 880, 1131, 1460, 1555
HpyAV CCTTC 4 cut(s) 73, 310, 333, 1793
HpyCH4V TGCA 5 cut(s) 469, 1215, 1311, 1456, 1701
HpyF10VI GCNNNNNNNGC 6 cut(s) 224, 533, 947, 989, 1567, 1595
HpyF3I CTNAG 3 cut(s) 376, 747, 979
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 1 cut(s) 591
HspAI GCGC 1 cut(s) 1622
Kpn2I TCCGGA 1 cut(s) 879
KspAI GTTAAC 2 cut(s) 484, 1638
KspI CCGCGG 1 cut(s) 531
LmnI GCTCC 8 cut(s) 77, 771, 968, 1096, 1148, 1567, 1679, 2068
Lsp1109I GCAGC 1 cut(s) 1227
LweI GCATC 5 cut(s) 145, 807, 1064, 1202, 1465
MaeIII GTNAC 9 cut(s) 307, 692, 840, 914, 958, 1277, 1502, 1903, 2025
MbiI CCGCTC 2 cut(s) 570, 1828
MboII GAAGA 9 cut(s) 16, 380, 422, 803, 840, 1280, 1289, 1722, 2098
MfeI CAATTG 1 cut(s) 330
MflI RGATCY 3 cut(s) 380, 419, 505
MhlI GDGCHC 1 cut(s) 1572
MlyI GAGTC 6 cut(s) 121, 1143, 1391, 1440, 1545, 1867
MmeI TCCRAC 5 cut(s) 102, 697, 1412, 1989, 2073
MroI TCCGGA 1 cut(s) 879
MslI CAYNNNNRTG 1 cut(s) 1488
MspA1I CMGCKG 2 cut(s) 530, 1601
MspR9I CCNGG 8 cut(s) 98, 260, 424, 1402, 1740, 1752, 1847, 1909
MunI CAATTG 1 cut(s) 330
Mva1269I GAATGC 1 cut(s) 1151
MvaI CCWGG 2 cut(s) 1402, 1909
MvnI CGCG 3 cut(s) 530, 1520, 1556
MwoI GCNNNNNNNGC 6 cut(s) 224, 533, 947, 989, 1567, 1595
NciI CCSGG 6 cut(s) 98, 260, 424, 1740, 1752, 1847
NlaIII CATG 1 cut(s) 591
NmeAIII GCCGAG 2 cut(s) 129, 1101
NmuCI GTSAC 3 cut(s) 840, 1277, 1903
NruI TCGCGA 1 cut(s) 1556
NspV TTCGAA 1 cut(s) 789
PcsI WCGNNNNNNNCGW 4 cut(s) 87, 405, 492, 555
PctI GAATGC 1 cut(s) 1151
PinAI ACCGGT 3 cut(s) 241, 386, 1640
PkrI GCNGC 5 cut(s) 529, 943, 1217, 1597, 1600
Ple19I CGATCG 1 cut(s) 2129
PleI GAGTC 6 cut(s) 121, 1142, 1390, 1439, 1545, 1866
PmaCI CACGTG 1 cut(s) 496
PmlI CACGTG 1 cut(s) 496
PpsI GAGTC 6 cut(s) 121, 1142, 1390, 1439, 1545, 1866
Ppu21I YACGTR 2 cut(s) 496, 697
Psp1406I AACGTT 1 cut(s) 122
Psp6I CCWGG 2 cut(s) 1400, 1907
PspCI CACGTG 1 cut(s) 496
PspEI GGTNACC 1 cut(s) 1903
PspGI CCWGG 2 cut(s) 1400, 1907
PspPI GGNCC 3 cut(s) 1876, 1911, 2122
PsuI RGATCY 3 cut(s) 380, 419, 505
PvuI CGATCG 1 cut(s) 2129
RruI TCGCGA 1 cut(s) 1556
RsaI GTAC 1 cut(s) 2005
RsaNI GTAC 1 cut(s) 2004
RseI CAYNNNNRTG 1 cut(s) 1488
SacII CCGCGG 1 cut(s) 531
SalI GTCGAC 1 cut(s) 551
SatI GCNGC 5 cut(s) 528, 942, 1216, 1596, 1599
Sau96I GGNCC 3 cut(s) 1876, 1911, 2122
SchI GAGTC 6 cut(s) 121, 1143, 1391, 1440, 1545, 1867
ScrFI CCNGG 8 cut(s) 98, 260, 424, 1402, 1740, 1752, 1847, 1909
SduI GDGCHC 1 cut(s) 1572
SfaNI GCATC 5 cut(s) 145, 807, 1064, 1202, 1465
Sfr303I CCGCGG 1 cut(s) 531
SfuI TTCGAA 1 cut(s) 789
SgrAI CRCCGGYG 1 cut(s) 386
SgrBI CCGCGG 1 cut(s) 531
SinI GGWCC 1 cut(s) 2122
SmiMI CAYNNNNRTG 1 cut(s) 1488
SmlI CTYRAG 3 cut(s) 133, 563, 1227
SmoI CTYRAG 3 cut(s) 133, 563, 1227
SnaBI TACGTA 1 cut(s) 697
StyD4I CCNGG 8 cut(s) 96, 258, 422, 1400, 1738, 1750, 1845, 1907
TaqII GACCGA 1 cut(s) 389
TauI GCSGC 4 cut(s) 530, 944, 1598, 1601
TscAI CASTG 4 cut(s) 751, 763, 1708, 2041
TseFI GTSAC 3 cut(s) 840, 1277, 1903
TseI GCWGC 1 cut(s) 1215
Tsp45I GTSAC 3 cut(s) 840, 1277, 1903
TspDTI ATGAA 7 cut(s) 381, 576, 771, 840, 1082, 2067, 2098
TspGWI ACGGA 8 cut(s) 186, 825, 1161, 1265, 1283, 1580, 1667, 1692
TspRI CASTG 4 cut(s) 751, 763, 1708, 2041
VpaK11BI GGWCC 1 cut(s) 2122
XapI RAATTY 6 cut(s) 248, 446, 583, 1241, 1326, 1522
XmiI GTMKAC 2 cut(s) 552, 1164
ZraI GACGTC 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.