transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| bHLH-MYC_N | PF14215 | 52 - 235 | 3.7e-55 | bHLH-MYC and R2R3-MYB transcription factors N-terminal |
| HLH | PF00010 | 415 - 461 | 3.5e-12 | Helix-loop-helix DNA-binding domain |
| bHLH-TF_ACT-like_plant | PF22754 | 513 - 584 | 1.1e-06 | Plant bHLH transcription factor, ACT-like domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 662 |
| AccBSI | CCGCTC | 1 cut(s) | 575 |
| AccII | CGCG | 3 cut(s) | 50, 620, 1358 |
| AciI | CCGC | 9 cut(s) | 56, 59, 186, 338, 393, 575, 1400, 1473, 1587 |
| AclI | AACGTT | 1 cut(s) | 1320 |
| AclWI | GGATC | 3 cut(s) | 259, 782, 1137 |
| AcsI | RAATTY | 2 cut(s) | 865, 894 |
| AcyI | GRCGYC | 1 cut(s) | 633 |
| AfaI | GTAC | 2 cut(s) | 1099, 1581 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 274, 776, 1223, 1611 |
| AflII | CTTAAG | 2 cut(s) | 1379, 1628 |
| AflIII | ACRYGT | 2 cut(s) | 48, 1576 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 60, 92 |
| Alw26I | GTCTC | 4 cut(s) | 170, 497, 1001, 1347 |
| AlwI | GGATC | 3 cut(s) | 259, 782, 1137 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 440 |
| ApeKI | GCWGC | 3 cut(s) | 1115, 1390, 1393 |
| ApoI | RAATTY | 2 cut(s) | 865, 894 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 940, 972 |
| AsuC2I | CCSGG | 4 cut(s) | 498, 538, 556, 1605 |
| AsuHPI | GGTGA | 1 cut(s) | 1714 |
| AsuII | TTCGAA | 2 cut(s) | 1325, 1502 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1038, 1071 |
| BauI | CACGAG | 1 cut(s) | 519 |
| BbvCI | CCTCAGC | 1 cut(s) | 129 |
| BbvI | GCAGC | 3 cut(s) | 1102, 1377, 1405 |
| BccI | CCATC | 5 cut(s) | 275, 601, 1324, 1430, 1702 |
| BceAI | ACGGC | 5 cut(s) | 22, 351, 646, 1222, 1533 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 332, 366 |
| BcnI | CCSGG | 4 cut(s) | 498, 538, 556, 1605 |
| BcoDI | GTCTC | 4 cut(s) | 170, 497, 1001, 1347 |
| BfaI | CTAG | 2 cut(s) | 1433, 1611 |
| BfmI | CTRYAG | 3 cut(s) | 927, 1391, 1527 |
| BfrI | CTTAAG | 2 cut(s) | 1379, 1628 |
| BglII | AGATCT | 2 cut(s) | 222, 676 |
| BisI | GCNGC | 6 cut(s) | 57, 60, 1116, 1391, 1394, 1588 |
| BlsI | GCNGC | 6 cut(s) | 58, 61, 1117, 1392, 1395, 1589 |
| BmcAI | AGTACT | 1 cut(s) | 1099 |
| Bme1390I | CCNGG | 4 cut(s) | 498, 538, 556, 1605 |
| BmiI | GGNNCC | 1 cut(s) | 1715 |
| BmrFI | CCNGG | 4 cut(s) | 498, 538, 556, 1605 |
| BmsI | GCATC | 4 cut(s) | 358, 672, 1074, 1157 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1760 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 362, 394 |
| Bpu10I | CCTNAGC | 1 cut(s) | 129 |
| Bpu14I | TTCGAA | 2 cut(s) | 1325, 1502 |
| BpuEI | CTTGAG | 1 cut(s) | 926 |
| BpuMI | CCSGG | 4 cut(s) | 498, 538, 556, 1605 |
| BsaAI | YACGTR | 2 cut(s) | 368, 1577 |
| BsaBI | GATNNNNATC | 2 cut(s) | 888, 1128 |
| BsaHI | GRCGYC | 1 cut(s) | 633 |
| BsaI | GGTCTC | 1 cut(s) | 497 |
| BsaJI | CCNNGG | 3 cut(s) | 268, 496, 1196 |
| BsaWI | WCCGGW | 3 cut(s) | 248, 821, 1183 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 150, 180 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 274, 776, 1223, 1611 |
| Bse118I | RCCGGY | 1 cut(s) | 1216 |
| Bse1I | ACTGG | 1 cut(s) | 203 |
| Bse8I | GATNNNNATC | 2 cut(s) | 888, 1128 |
| BseDI | CCNNGG | 3 cut(s) | 268, 496, 1196 |
| BseGI | GGATG | 5 cut(s) | 242, 1089, 1446, 1570, 1600 |
| BseJI | GATNNNNATC | 2 cut(s) | 888, 1128 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 274, 776, 1223, 1611 |
| BseMII | CTCAG | 3 cut(s) | 143, 149, 687 |
| BseNI | ACTGG | 1 cut(s) | 203 |
| BseRI | GAGGAG | 1 cut(s) | 1430 |
| BseXI | GCAGC | 3 cut(s) | 1102, 1377, 1405 |
| BseYI | CCCAGC | 1 cut(s) | 273 |
| Bsh1236I | CGCG | 3 cut(s) | 50, 620, 1358 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 274, 776, 1223, 1611 |
| BsmAI | GTCTC | 4 cut(s) | 170, 497, 1001, 1347 |
| BsmBI | CGTCTC | 2 cut(s) | 170, 1347 |
| Bso31I | GGTCTC | 1 cut(s) | 497 |
| Bsp119I | TTCGAA | 2 cut(s) | 1325, 1502 |
| Bsp1407I | TGTACA | 1 cut(s) | 1579 |
| Bsp68I | TCGCGA | 1 cut(s) | 620 |
| BspACI | CCGC | 9 cut(s) | 56, 59, 186, 338, 393, 575, 1400, 1473, 1587 |
| BspCNI | CTCAG | 3 cut(s) | 142, 148, 686 |
| BspFNI | CGCG | 3 cut(s) | 50, 620, 1358 |
| BspHI | TCATGA | 1 cut(s) | 1729 |
| BspLI | GGNNCC | 1 cut(s) | 1715 |
| BspMAI | CTGCAG | 1 cut(s) | 1395 |
| BspPI | GGATC | 3 cut(s) | 259, 782, 1137 |
| BspQI | GCTCTTC | 1 cut(s) | 1227 |
| BspT104I | TTCGAA | 2 cut(s) | 1325, 1502 |
| BspTI | CTTAAG | 2 cut(s) | 1379, 1628 |
| BspTNI | GGTCTC | 1 cut(s) | 497 |
| BsrBI | CCGCTC | 1 cut(s) | 575 |
| BsrFI | RCCGGY | 1 cut(s) | 1216 |
| BsrGI | TGTACA | 1 cut(s) | 1579 |
| BsrI | ACTGG | 1 cut(s) | 203 |
| BssAI | RCCGGY | 1 cut(s) | 1216 |
| BssECI | CCNNGG | 3 cut(s) | 268, 496, 1196 |
| BssNI | GRCGYC | 1 cut(s) | 633 |
| BssSI | CACGAG | 1 cut(s) | 519 |
| Bst2BI | CACGAG | 1 cut(s) | 519 |
| Bst4CI | ACNGT | 5 cut(s) | 262, 485, 719, 1102, 1702 |
| Bst6I | CTCTTC | 4 cut(s) | 159, 1037, 1227, 1264 |
| BstACI | GRCGYC | 1 cut(s) | 633 |
| BstAFI | CTTAAG | 2 cut(s) | 1379, 1628 |
| BstAUI | TGTACA | 1 cut(s) | 1579 |
| BstBAI | YACGTR | 2 cut(s) | 368, 1577 |
| BstBI | TTCGAA | 2 cut(s) | 1325, 1502 |
| BstC8I | GCNNGC | 1 cut(s) | 1398 |
| BstDEI | CTNAG | 6 cut(s) | 129, 135, 454, 673, 876, 900 |
| BstF5I | GGATG | 5 cut(s) | 242, 1089, 1446, 1570, 1600 |
| BstFNI | CGCG | 3 cut(s) | 50, 620, 1358 |
| BstMAI | GTCTC | 4 cut(s) | 170, 497, 1001, 1347 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 56, 68 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1760 |
| BstSCI | CCNGG | 4 cut(s) | 496, 536, 554, 1603 |
| BstSFI | CTRYAG | 3 cut(s) | 927, 1391, 1527 |
| BstUI | CGCG | 3 cut(s) | 50, 620, 1358 |
| BstV1I | GCAGC | 3 cut(s) | 1102, 1377, 1405 |
| BstX2I | RGATCY | 2 cut(s) | 222, 676 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 798 |
| BstYI | RGATCY | 2 cut(s) | 222, 676 |
| BtsCI | GGATG | 5 cut(s) | 242, 1089, 1446, 1570, 1600 |
| BtsIMutI | CAGTG | 1 cut(s) | 267 |
| BtuMI | TCGCGA | 1 cut(s) | 620 |
| Cac8I | GCNNGC | 1 cut(s) | 1398 |
| CaiI | CAGNNNCTG | 1 cut(s) | 440 |
| CciI | TCATGA | 1 cut(s) | 1729 |
| Cfr10I | RCCGGY | 1 cut(s) | 1216 |
| CseI | GACGC | 4 cut(s) | 39, 56, 622, 1364 |
| Csp6I | GTAC | 2 cut(s) | 1098, 1580 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 700, 703, 735, 738 |
| CviAII | CATG | 4 cut(s) | 1247, 1618, 1655, 1730 |
| CviQI | GTAC | 2 cut(s) | 1098, 1580 |
| DdeI | CTNAG | 6 cut(s) | 129, 135, 454, 673, 876, 900 |
| Eam1104I | CTCTTC | 4 cut(s) | 159, 1037, 1227, 1264 |
| EarI | CTCTTC | 4 cut(s) | 159, 1037, 1227, 1264 |
| EciI | GGCGGA | 3 cut(s) | 175, 353, 408 |
| Eco31I | GGTCTC | 1 cut(s) | 497 |
| EcoRI | GAATTC | 1 cut(s) | 865 |
| EcoT22I | ATGCAT | 1 cut(s) | 687 |
| Esp3I | CGTCTC | 2 cut(s) | 170, 1347 |
| FaeI | CATG | 4 cut(s) | 1250, 1621, 1658, 1733 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 138, 170, 1071, 1103, 1329, 1361 |
| FatI | CATG | 4 cut(s) | 1246, 1617, 1654, 1729 |
| FauI | CCCGC | 2 cut(s) | 568, 1466 |
| Fnu4HI | GCNGC | 6 cut(s) | 57, 60, 1116, 1391, 1394, 1588 |
| FokI | GGATG | 5 cut(s) | 229, 1096, 1453, 1577, 1587 |
| Fsp4HI | GCNGC | 6 cut(s) | 57, 60, 1116, 1391, 1394, 1588 |
| FspBI | CTAG | 2 cut(s) | 1433, 1611 |
| GluI | GCNGC | 6 cut(s) | 57, 60, 1116, 1391, 1394, 1588 |
| GsaI | CCCAGC | 1 cut(s) | 277 |
| HgaI | GACGC | 4 cut(s) | 39, 56, 622, 1364 |
| Hin1I | GRCGYC | 1 cut(s) | 633 |
| Hin1II | CATG | 4 cut(s) | 1250, 1621, 1658, 1733 |
| HincII | GTYRAC | 2 cut(s) | 481, 694 |
| HindII | GTYRAC | 2 cut(s) | 481, 694 |
| HindIII | AAGCTT | 6 cut(s) | 69, 171, 472, 741, 902, 1338 |
| HpaI | GTTAAC | 2 cut(s) | 481, 694 |
| HphI | GGTGA | 1 cut(s) | 1714 |
| Hpy166II | GTNNAC | 4 cut(s) | 481, 694, 809, 1580 |
| Hpy188III | TCNNGA | 7 cut(s) | 31, 619, 770, 964, 1142, 1508, 1730 |
| Hpy8I | GTNNAC | 4 cut(s) | 481, 694, 809, 1580 |
| Hpy99I | CGWCG | 5 cut(s) | 44, 55, 638, 655, 817 |
| HpyAV | CCTTC | 2 cut(s) | 1073, 1445 |
| HpyCH4III | ACNGT | 5 cut(s) | 262, 485, 719, 1102, 1702 |
| HpyCH4IV | ACGT | 4 cut(s) | 163, 367, 1320, 1576 |
| HpyCH4V | TGCA | 2 cut(s) | 685, 1393 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 56, 68 |
| HpyF3I | CTNAG | 6 cut(s) | 129, 135, 454, 673, 876, 900 |
| HpySE526I | ACGT | 4 cut(s) | 163, 367, 1320, 1576 |
| Hsp92I | GRCGYC | 1 cut(s) | 633 |
| Hsp92II | CATG | 4 cut(s) | 1250, 1621, 1658, 1733 |
| KspAI | GTTAAC | 2 cut(s) | 481, 694 |
| LguI | GCTCTTC | 1 cut(s) | 1227 |
| LmnI | GCTCC | 2 cut(s) | 340, 1713 |
| Lsp1109I | GCAGC | 3 cut(s) | 1102, 1377, 1405 |
| LweI | GCATC | 4 cut(s) | 358, 672, 1074, 1157 |
| MaeI | CTAG | 2 cut(s) | 1433, 1611 |
| MaeII | ACGT | 4 cut(s) | 163, 367, 1320, 1576 |
| MaeIII | GTNAC | 2 cut(s) | 284, 430 |
| MbiI | CCGCTC | 1 cut(s) | 575 |
| MflI | RGATCY | 2 cut(s) | 222, 676 |
| MluCI | AATT | 7 cut(s) | 396, 706, 865, 871, 894, 1634, 1718 |
| MluI | ACGCGT | 1 cut(s) | 48 |
| MlyI | GAGTC | 3 cut(s) | 460, 616, 1412 |
| MmeI | TCCRAC | 3 cut(s) | 63, 633, 1744 |
| Mph1103I | ATGCAT | 1 cut(s) | 687 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1605 |
| MspA1I | CMGCKG | 1 cut(s) | 1115 |
| MspCI | CTTAAG | 2 cut(s) | 1379, 1628 |
| MspR9I | CCNGG | 4 cut(s) | 498, 538, 556, 1605 |
| MvnI | CGCG | 3 cut(s) | 50, 620, 1358 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 56, 68 |
| NciI | CCSGG | 4 cut(s) | 498, 538, 556, 1605 |
| NlaIII | CATG | 4 cut(s) | 1250, 1621, 1658, 1733 |
| NlaIV | GGNNCC | 1 cut(s) | 1715 |
| NmeAIII | GCCGAG | 2 cut(s) | 249, 1221 |
| NruI | TCGCGA | 1 cut(s) | 620 |
| NsiI | ATGCAT | 1 cut(s) | 687 |
| NspV | TTCGAA | 2 cut(s) | 1325, 1502 |
| PagI | TCATGA | 1 cut(s) | 1729 |
| PciSI | GCTCTTC | 1 cut(s) | 1227 |
| PkrI | GCNGC | 6 cut(s) | 58, 61, 1117, 1392, 1395, 1589 |
| PleI | GAGTC | 3 cut(s) | 460, 616, 1411 |
| PpsI | GAGTC | 3 cut(s) | 460, 616, 1411 |
| Ppu21I | YACGTR | 2 cut(s) | 368, 1577 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1760 |
| PsiI | TTATAA | 1 cut(s) | 662 |
| Psp1406I | AACGTT | 1 cut(s) | 1320 |
| PspFI | CCCAGC | 1 cut(s) | 273 |
| PspN4I | GGNNCC | 1 cut(s) | 1715 |
| PstI | CTGCAG | 1 cut(s) | 1395 |
| PstNI | CAGNNNCTG | 1 cut(s) | 440 |
| PsuI | RGATCY | 2 cut(s) | 222, 676 |
| PvuII | CAGCTG | 1 cut(s) | 1115 |
| RruI | TCGCGA | 1 cut(s) | 620 |
| RsaI | GTAC | 2 cut(s) | 1099, 1581 |
| RsaNI | GTAC | 2 cut(s) | 1098, 1580 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1605 |
| SapI | GCTCTTC | 1 cut(s) | 1227 |
| SatI | GCNGC | 6 cut(s) | 57, 60, 1116, 1391, 1394, 1588 |
| ScaI | AGTACT | 1 cut(s) | 1099 |
| SchI | GAGTC | 3 cut(s) | 460, 616, 1412 |
| ScrFI | CCNGG | 4 cut(s) | 498, 538, 556, 1605 |
| SfaNI | GCATC | 4 cut(s) | 358, 672, 1074, 1157 |
| SfcI | CTRYAG | 3 cut(s) | 927, 1391, 1527 |
| SfuI | TTCGAA | 2 cut(s) | 1325, 1502 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1605 |
| SmlI | CTYRAG | 3 cut(s) | 905, 1379, 1628 |
| SmoI | CTYRAG | 3 cut(s) | 905, 1379, 1628 |
| Sse9I | AATT | 7 cut(s) | 396, 706, 865, 871, 894, 1634, 1718 |
| SsiI | CCGC | 9 cut(s) | 56, 59, 186, 338, 393, 575, 1400, 1473, 1587 |
| SspMI | CTAG | 2 cut(s) | 1433, 1611 |
| StyD4I | CCNGG | 4 cut(s) | 496, 536, 554, 1603 |
| TaaI | ACNGT | 5 cut(s) | 262, 485, 719, 1102, 1702 |
| TaiI | ACGT | 4 cut(s) | 166, 370, 1323, 1579 |
| TaqI | TCGA | 8 cut(s) | 237, 461, 828, 863, 963, 1325, 1385, 1502 |
| TasI | AATT | 7 cut(s) | 396, 706, 865, 871, 894, 1634, 1718 |
| TatI | WGTACW | 2 cut(s) | 1097, 1579 |
| TauI | GCSGC | 3 cut(s) | 59, 62, 1590 |
| TscAI | CASTG | 1 cut(s) | 267 |
| TseI | GCWGC | 3 cut(s) | 1115, 1390, 1393 |
| TspDTI | ATGAA | 7 cut(s) | 17, 64, 231, 426, 438, 1092, 1606 |
| TspGWI | ACGGA | 2 cut(s) | 1507, 1657 |
| TspRI | CASTG | 1 cut(s) | 267 |
| Vha464I | CTTAAG | 2 cut(s) | 1379, 1628 |
| XapI | RAATTY | 2 cut(s) | 865, 894 |
| XspI | CTAG | 2 cut(s) | 1433, 1611 |
| ZrmI | AGTACT | 1 cut(s) | 1099 |
| Zsp2I | ATGCAT | 1 cut(s) | 687 |