AT5G66790

Epidermal growth factor-like domain.

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
N/A
Physical Location & Seq
Forward (+)
26664842 .. 26667809
2968 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G66790.1

Sequence Viewer

Length: 1869 bp
ATGGCAGAAACTCCTCAACCGTATCTCATCTTCGTCTTCTTCGTCTTCACTCTAACCGTTGCTACACAAACCACCGGTTCGGTTAAGTGCAAAACAAGTTTGCTCCGTTACCCGTTTGGTTTCTCCGACGGTTATCCGATCCGATTCAACTGCTCTGAGATAACCGGAGAGGCCGTGATCGGTGAATTCGCTGTGCAAGAAGTGACAAACTCCAACATCTACGTCGAAATCCCGCCGGTTTGCAAACGCAACATCCGTAAAATCGAACAACTTTTCCGGGAAAATCTTGCTCCGTCGAAATTACAGAACATAATTCTCGTCCAAGGATGCAAGAAACAGAACAAGTCTTCTAATTGCTTAATCCGCAATAAATTCGTTGAAAACCGGTTAAATCTCAGCAAATGTAAATCTCCGGTTAGCTGTCTCGACGGAGCAACAACGACAACTGCCGATGTGATGAGTTTAGGCGACGTTGTGAACGGAAGTGGATGTAAGTATTGGTTCTCTTCTATTTCTCAATCGCAAGTTTCGGTCAATTTGGGTCGACTCAAGCTTGATTGGTGGCTTAAGGGAAGTTGCAGTAACACCACTTGCTCGGAGAACGCAGACTGTGCCAAAGTTAAGCTCGACGACGGTGGACTCGGTCATCGCTGCACTTGTCGTGAAGGATTTAGCGGTAAAGCCTTCACCGTGCCTGGTGGTTGCCACCGATTAGTTTACAAACGCAAAGGACTACACAAACTCGTTGTTCTTGGTACTGCGGGGATTTTGGTTGGAGTTTTAGTAATCGTGGTCTTGATAGCTACATATTTCTTCCGGAACAAGCAATCTGCGTCATCTGAAAGAGCATCAATCGCGAATCGCTTGCTTTGCGAGCTAGCCGGAAACTCAAGTGTTCCTTTCTACACCTACAAAGAGATTGAGAAAGCTACCGATAGTTTCTCCGACAAGAACATGCTCGGAACCGGAGCATACGGAACAGTCTACGCAGGCGAATTCCCAAACAGCTCATGCGTCGCTATAAAACGTCTCAAACACAAAGACACTACAAGCATTGACCAAGTTGTGAACGAGATCAAGCTTCTTTCCTCTGTGAGCCACCCAAATCTAGTACGTCTCTTAGGTTGTTGCTTTGCAGATGGAGAACCGTTTCTAGTCTATGAGTTCATGCCAAACGGAACTCTTTATCAGCATTTACAACACGAGAGAGGCCAACCACCACTTTCTTGGCAGCTCCGACTCGCCATTGCGTGTCAAACCGCAAACGCAATCGCACATCTCCACTCTTCAGTAAACCCTCCTATCTACCACCGAGACATAAAATCTAGTAACATCCTCCTTGACCACGAATTCAACTCCAAGATATCTGATTTCGGACTCTCTAGGCTCGGCATGTCTACCGATTTCGAAGCCTCTCATATCTCCACGGCTCCACAAGGCACTCCAGGATACTTAGATCCTCAATATCACCAAGATTTTCAGCTCTCGGACAAGAGTGATGTCTATAGCTTTGGAGTTGTTCTCGTAGAAATCATCTCAGGCTTTAAAGTCATAGACTTCACTCGTCCCTACTCTGAAGTGAACCTAGCCTCTCTTGCCGTCGACAGGATCGGAAGAGGGCGTGTGGTAGATATCATCGATCCCTGCTTAAACAAAGAAATCAATCCGAAAATGTTTGCATCTATCCACAACTTAGCAGAATTGGCGTTTCGCTGCTTATCCTTTCACAGAAACATGAGGCCTACGATGGTAGAAATTACGGAAGATCTCCACCGGATTAAGCTTATGCACTATGGTACAGAGTCAGGTAAGTTCAAAAACCGATCCGAAATAGATATGAAGAGACAACAATCATTTCCGAGAGAATGA

Protein Analysis

622

Amino Acids

69.27

Weight (kDa)

8.77

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 315 - 588 2.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 317 - 590 2.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 544, 984, 1397, 1602
AccII CGCG 1 cut(s) 857
AccIII TCCGGA 1 cut(s) 816
AciI CCGC 5 cut(s) 233, 364, 675, 761, 1260
AclWI GGATC 5 cut(s) 133, 1451, 1616, 1634, 1818
AcsI RAATTY 4 cut(s) 185, 371, 995, 1349
AcuI CTGAAG 2 cut(s) 1272, 1596
AfaI GTAC 3 cut(s) 757, 1113, 1798
AfiI CCNNNNNNNGG 1 cut(s) 1605
AflII CTTAAG 1 cut(s) 566
AgeI ACCGGT 2 cut(s) 74, 384
AgsI TTSAA 4 cut(s) 148, 380, 1354, 1816
AjnI CCWGG 2 cut(s) 694, 1444
AloI GAACNNNNNNTCC 2 cut(s) 258, 290
Alw26I GTCTC 5 cut(s) 428, 1034, 1121, 1308, 1837
AlwI GGATC 5 cut(s) 133, 1451, 1616, 1634, 1818
Aor13HI TCCGGA 1 cut(s) 816
AoxI GGCC 3 cut(s) 171, 1210, 1739
ApeKI GCWGC 3 cut(s) 651, 1231, 1713
ApoI RAATTY 4 cut(s) 185, 371, 995, 1349
AsiGI ACCGGT 2 cut(s) 74, 384
Asp700I GAANNNNTTC 1 cut(s) 1149
AsuC2I CCSGG 1 cut(s) 278
AsuHPI GGTGA 3 cut(s) 194, 679, 1460
AsuII TTCGAA 1 cut(s) 1407
AsuNHI GCTAGC 1 cut(s) 877
BarI GAAGNNNNNNTAC 2 cut(s) 14, 46
BauI CACGAG 1 cut(s) 1202
BbsI GAAGAC 3 cut(s) 28, 37, 339
BbvI GCAGC 3 cut(s) 638, 1243, 1700
BccI CCATC 2 cut(s) 1133, 1741
BceAI ACGGC 3 cut(s) 158, 1443, 1583
BcgI CGANNNNNNTGC 6 cut(s) 132, 166, 355, 389, 847, 881
BciT130I CCWGG 2 cut(s) 696, 1446
BciVI GTATCC 1 cut(s) 1442
BcnI CCSGG 1 cut(s) 278
BcoDI GTCTC 5 cut(s) 428, 1034, 1121, 1308, 1837
BfaI CTAG 6 cut(s) 878, 1109, 1154, 1326, 1383, 1586
BfmI CTRYAG 1 cut(s) 1504
BfrI CTTAAG 1 cut(s) 566
BfuI GTATCC 1 cut(s) 1442
BglII AGATCT 1 cut(s) 1765
BisI GCNGC 3 cut(s) 652, 1232, 1714
BlsI GCNGC 3 cut(s) 653, 1233, 1715
Bme1390I CCNGG 3 cut(s) 278, 696, 1446
BmiI GGNNCC 2 cut(s) 964, 1431
BmrFI CCNGG 3 cut(s) 278, 696, 1446
BmsI GCATC 3 cut(s) 317, 857, 1688
BmtI GCTAGC 1 cut(s) 881
BpiI GAAGAC 3 cut(s) 28, 37, 339
BplI GAGNNNNNCTC 2 cut(s) 1506, 1538
BpmI CTGGAG 1 cut(s) 1428
Bpu14I TTCGAA 1 cut(s) 1407
BpuEI CTTGAG 2 cut(s) 533, 874
BpuMI CCSGG 1 cut(s) 278
Bsa29I ATCGAT 1 cut(s) 1638
BsaJI CCNNGG 2 cut(s) 322, 1425
BsaWI WCCGGW 7 cut(s) 74, 164, 384, 412, 816, 965, 1773
BsaXI ACNNNNNCTCC 4 cut(s) 159, 189, 768, 798
Bsc4I CCNNNNNNNGG 1 cut(s) 1605
Bse118I RCCGGY 3 cut(s) 74, 235, 384
Bse3DI GCAATG 1 cut(s) 1245
BseAI TCCGGA 1 cut(s) 816
BseBI CCWGG 2 cut(s) 696, 1446
BseCI ATCGAT 1 cut(s) 1638
BseDI CCNNGG 2 cut(s) 322, 1425
BseGI GGATG 4 cut(s) 252, 332, 494, 1332
BseLI CCNNNNNNNGG 1 cut(s) 1605
BseMI GCAATG 1 cut(s) 1245
BseMII CTCAG 3 cut(s) 147, 409, 1551
BseXI GCAGC 3 cut(s) 638, 1243, 1700
BsgI GTGCAG 1 cut(s) 637
Bsh1236I CGCG 1 cut(s) 857
BshFI GGCC 3 cut(s) 173, 1212, 1741
BshTI ACCGGT 2 cut(s) 74, 384
BshVI ATCGAT 1 cut(s) 1638
BslFI GGGAC 1 cut(s) 1551
BslI CCNNNNNNNGG 1 cut(s) 1605
BsmAI GTCTC 5 cut(s) 428, 1034, 1121, 1308, 1837
BsmBI CGTCTC 2 cut(s) 1034, 1121
BsmFI GGGAC 1 cut(s) 1551
BsnI GGCC 3 cut(s) 173, 1212, 1741
Bsp119I TTCGAA 1 cut(s) 1407
Bsp13I TCCGGA 1 cut(s) 816
Bsp143I GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
Bsp68I TCGCGA 1 cut(s) 857
BspACI CCGC 5 cut(s) 233, 364, 675, 761, 1260
BspANI GGCC 3 cut(s) 173, 1212, 1741
BspCNI CTCAG 3 cut(s) 148, 408, 1550
BspDI ATCGAT 1 cut(s) 1638
BspEI TCCGGA 1 cut(s) 816
BspFNI CGCG 1 cut(s) 857
BspLI GGNNCC 2 cut(s) 964, 1431
BspOI GCTAGC 1 cut(s) 881
BspPI GGATC 5 cut(s) 133, 1451, 1616, 1634, 1818
BspT104I TTCGAA 1 cut(s) 1407
BspTI CTTAAG 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 1245
BsrFI RCCGGY 3 cut(s) 74, 235, 384
BssAI RCCGGY 3 cut(s) 74, 235, 384
BssECI CCNNGG 2 cut(s) 322, 1425
BssMI GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
BssSI CACGAG 1 cut(s) 1202
BssT1I CCWWGG 1 cut(s) 322
Bst2BI CACGAG 1 cut(s) 1202
Bst2UI CCWGG 2 cut(s) 696, 1446
Bst4CI ACNGT 8 cut(s) 21, 58, 131, 611, 635, 691, 982, 1149
Bst6I CTCTTC 4 cut(s) 511, 1291, 1609, 1835
BstAFI CTTAAG 1 cut(s) 566
BstAPI GCANNNNNTGC 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 1407
BstC8I GCNNGC 4 cut(s) 866, 875, 879, 991
BstDEI CTNAG 6 cut(s) 156, 395, 1120, 1453, 1537, 1693
BstDSI CCRYGG 1 cut(s) 1425
BstF5I GGATG 4 cut(s) 252, 332, 494, 1332
BstFNI CGCG 1 cut(s) 857
BstKTI GATC 8 cut(s) 141, 180, 1077, 1459, 1611, 1642, 1768, 1826
BstMAI GTCTC 5 cut(s) 428, 1034, 1121, 1308, 1837
BstMBI GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
BstMWI GCNNNNNNNGC 7 cut(s) 363, 611, 854, 870, 874, 1595, 1703
BstNI CCWGG 2 cut(s) 696, 1446
BstNSI RCATGY 2 cut(s) 958, 1396
BstSCI CCNGG 3 cut(s) 276, 694, 1444
BstSFI CTRYAG 1 cut(s) 1504
BstUI CGCG 1 cut(s) 857
BstV1I GCAGC 3 cut(s) 638, 1243, 1700
BstV2I GAAGAC 3 cut(s) 28, 37, 339
BstX2I RGATCY 2 cut(s) 1456, 1765
BstXI CCANNNNNNTGG 1 cut(s) 1227
BstYI RGATCY 2 cut(s) 1456, 1765
Bsu15I ATCGAT 1 cut(s) 1638
BsuI GTATCC 1 cut(s) 1442
BsuRI GGCC 3 cut(s) 173, 1212, 1741
BsuTUI ATCGAT 1 cut(s) 1638
BtgI CCRYGG 1 cut(s) 1425
BtgZI GCGATG 1 cut(s) 632
BtsCI GGATG 4 cut(s) 252, 332, 494, 1332
BtuMI TCGCGA 1 cut(s) 857
Cac8I GCNNGC 4 cut(s) 866, 875, 879, 991
Cfr10I RCCGGY 3 cut(s) 74, 235, 384
ClaI ATCGAT 1 cut(s) 1638
CseI GACGC 2 cut(s) 822, 1003
Csp6I GTAC 3 cut(s) 756, 1112, 1797
CspAI ACCGGT 2 cut(s) 74, 384
CviAII CATG 5 cut(s) 955, 1011, 1168, 1393, 1735
CviQI GTAC 3 cut(s) 756, 1112, 1797
DdeI CTNAG 6 cut(s) 156, 395, 1120, 1453, 1537, 1693
DpnI GATC 8 cut(s) 140, 179, 1076, 1458, 1610, 1641, 1767, 1825
DpnII GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
DraI TTTAAA 1 cut(s) 1546
Eam1104I CTCTTC 4 cut(s) 511, 1291, 1609, 1835
EarI CTCTTC 4 cut(s) 511, 1291, 1609, 1835
Eco130I CCWWGG 1 cut(s) 322
Eco147I AGGCCT 1 cut(s) 1741
Eco32I GATATC 2 cut(s) 1365, 1633
Eco57I CTGAAG 2 cut(s) 1272, 1596
EcoRI GAATTC 3 cut(s) 185, 995, 1349
EcoRII CCWGG 2 cut(s) 694, 1444
EcoRV GATATC 2 cut(s) 1365, 1633
EcoT14I CCWWGG 1 cut(s) 322
ErhI CCWWGG 1 cut(s) 322
Esp3I CGTCTC 2 cut(s) 1034, 1121
FaeI CATG 5 cut(s) 958, 1014, 1171, 1396, 1738
FalI AAGNNNNNCTT 2 cut(s) 883, 915
FaqI GGGAC 1 cut(s) 1551
FatI CATG 5 cut(s) 954, 1010, 1167, 1392, 1734
FauI CCCGC 2 cut(s) 240, 754
FblI GTMKAC 4 cut(s) 544, 984, 1397, 1602
Fnu4HI GCNGC 3 cut(s) 652, 1232, 1714
FokI GGATG 4 cut(s) 239, 339, 501, 1319
Fsp4HI GCNGC 3 cut(s) 652, 1232, 1714
FspBI CTAG 6 cut(s) 878, 1109, 1154, 1326, 1383, 1586
GluI GCNGC 3 cut(s) 652, 1232, 1714
GsuI CTGGAG 1 cut(s) 1428
HaeIII GGCC 3 cut(s) 173, 1212, 1741
HgaI GACGC 2 cut(s) 822, 1003
Hin1II CATG 5 cut(s) 958, 1014, 1171, 1396, 1738
HincII GTYRAC 2 cut(s) 545, 1603
HindII GTYRAC 2 cut(s) 545, 1603
HindIII AAGCTT 3 cut(s) 551, 1079, 1781
HinfI GANTC 7 cut(s) 144, 546, 639, 859, 1239, 1377, 1802
HphI GGTGA 3 cut(s) 194, 679, 1460
Hpy188III TCNNGA 5 cut(s) 425, 662, 796, 817, 856
Hpy99I CGWCG 9 cut(s) 131, 227, 298, 431, 473, 632, 635, 1019, 1604
HpyAV CCTTC 2 cut(s) 659, 694
HpyCH4III ACNGT 8 cut(s) 21, 58, 131, 611, 635, 691, 982, 1149
HpyCH4IV ACGT 4 cut(s) 222, 471, 1027, 1114
HpyCH4V TGCA 9 cut(s) 90, 196, 243, 330, 579, 654, 1136, 1679, 1789
HpyF10VI GCNNNNNNNGC 7 cut(s) 363, 611, 854, 870, 874, 1595, 1703
HpyF3I CTNAG 6 cut(s) 156, 395, 1120, 1453, 1537, 1693
HpySE526I ACGT 4 cut(s) 222, 471, 1027, 1114
Hsp92II CATG 5 cut(s) 958, 1014, 1171, 1396, 1738
Kpn2I TCCGGA 1 cut(s) 816
Kzo9I GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
LmnI GCTCC 6 cut(s) 108, 295, 431, 968, 1239, 1435
Lsp1109I GCAGC 3 cut(s) 638, 1243, 1700
LweI GCATC 3 cut(s) 317, 857, 1688
MaeI CTAG 6 cut(s) 878, 1109, 1154, 1326, 1383, 1586
MaeII ACGT 4 cut(s) 222, 471, 1027, 1114
MaeIII GTNAC 4 cut(s) 107, 202, 581, 1328
MalI GATC 8 cut(s) 140, 179, 1076, 1458, 1610, 1641, 1767, 1825
MboI GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
MflI RGATCY 2 cut(s) 1456, 1765
MlyI GAGTC 5 cut(s) 540, 633, 1233, 1371, 1811
MmeI TCCRAC 5 cut(s) 150, 237, 754, 969, 1261
MroI TCCGGA 1 cut(s) 816
MroXI GAANNNNTTC 1 cut(s) 1149
MseI TTAA 8 cut(s) 84, 359, 389, 567, 621, 1545, 1649, 1779
MspCI CTTAAG 1 cut(s) 566
MspR9I CCNGG 3 cut(s) 278, 696, 1446
MvaI CCWGG 2 cut(s) 696, 1446
MvnI CGCG 1 cut(s) 857
MwoI GCNNNNNNNGC 7 cut(s) 363, 611, 854, 870, 874, 1595, 1703
NciI CCSGG 1 cut(s) 278
NdeII GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
NheI GCTAGC 1 cut(s) 877
NlaIII CATG 5 cut(s) 958, 1014, 1171, 1396, 1738
NlaIV GGNNCC 2 cut(s) 964, 1431
NmeAIII GCCGAG 1 cut(s) 1368
NmuCI GTSAC 1 cut(s) 202
NruI TCGCGA 1 cut(s) 857
NspI RCATGY 2 cut(s) 958, 1396
NspV TTCGAA 1 cut(s) 1407
PceI AGGCCT 1 cut(s) 1741
PcsI WCGNNNNNNNCGW 2 cut(s) 39, 253
PdmI GAANNNNTTC 1 cut(s) 1149
PfeI GAWTC 2 cut(s) 144, 859
PflFI GACNNNGTC 1 cut(s) 642
PfoI TCCNGGA 2 cut(s) 276, 1444
PinAI ACCGGT 2 cut(s) 74, 384
PkrI GCNGC 3 cut(s) 653, 1233, 1715
PleI GAGTC 5 cut(s) 540, 633, 1233, 1371, 1810
PpsI GAGTC 5 cut(s) 540, 633, 1233, 1371, 1810
Psp6I CCWGG 2 cut(s) 694, 1444
PspGI CCWGG 2 cut(s) 694, 1444
PspN4I GGNNCC 2 cut(s) 964, 1431
PsuI RGATCY 2 cut(s) 1456, 1765
PsyI GACNNNGTC 1 cut(s) 642
RruI TCGCGA 1 cut(s) 857
RsaI GTAC 3 cut(s) 757, 1113, 1798
RsaNI GTAC 3 cut(s) 756, 1112, 1797
SalI GTCGAC 2 cut(s) 543, 1601
SaqAI TTAA 8 cut(s) 84, 359, 389, 567, 621, 1545, 1649, 1779
SatI GCNGC 3 cut(s) 652, 1232, 1714
Sau3AI GATC 8 cut(s) 138, 177, 1074, 1456, 1608, 1639, 1765, 1823
SchI GAGTC 5 cut(s) 540, 633, 1233, 1371, 1811
ScrFI CCNGG 3 cut(s) 278, 696, 1446
SfaNI GCATC 3 cut(s) 317, 857, 1688
SfcI CTRYAG 1 cut(s) 1504
SfuI TTCGAA 1 cut(s) 1407
SmlI CTYRAG 3 cut(s) 548, 566, 889
SmoI CTYRAG 3 cut(s) 548, 566, 889
SseBI AGGCCT 1 cut(s) 1741
SsiI CCGC 5 cut(s) 233, 364, 675, 761, 1260
SspMI CTAG 6 cut(s) 878, 1109, 1154, 1326, 1383, 1586
StuI AGGCCT 1 cut(s) 1741
StyD4I CCNGG 3 cut(s) 276, 694, 1444
StyI CCWWGG 1 cut(s) 322
TaaI ACNGT 8 cut(s) 21, 58, 131, 611, 635, 691, 982, 1149
TaiI ACGT 4 cut(s) 225, 474, 1030, 1117
TaqI TCGA 9 cut(s) 225, 264, 296, 426, 544, 627, 1407, 1602, 1638
TaqII GACCGA 2 cut(s) 520, 632
TfiI GAWTC 2 cut(s) 144, 859
Tru1I TTAA 8 cut(s) 84, 359, 389, 567, 621, 1545, 1649, 1779
Tru9I TTAA 8 cut(s) 84, 359, 389, 567, 621, 1545, 1649, 1779
TseFI GTSAC 1 cut(s) 202
TseI GCWGC 3 cut(s) 651, 1231, 1713
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 2 cut(s) 1156, 1853
TspGWI ACGGA 8 cut(s) 95, 245, 282, 444, 495, 990, 1191, 1775
Tth111I GACNNNGTC 1 cut(s) 642
Vha464I CTTAAG 1 cut(s) 566
XapI RAATTY 4 cut(s) 185, 371, 995, 1349
XceI RCATGY 2 cut(s) 958, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 1224
XmiI GTMKAC 4 cut(s) 544, 984, 1397, 1602
XmnI GAANNNNTTC 1 cut(s) 1149
XspI CTAG 6 cut(s) 878, 1109, 1154, 1326, 1383, 1586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.