FvH4_2g04360
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
N/A
Physical Location & Seq
Reverse (-)
3384821 .. 3386140
1320 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04360.t1

Sequence Viewer

Length: 1215 bp
ATGAAGAGAAGCAATTTGCCGCAGAAGGAGATATCTTCAATGGTTTTGAGTAAGATGCGTGAAATTCCAGAGGCCTACCTTGGAATGATAGTCAATGATGTTGTTATAACAGTCCTAGCATATTTTAATAACTTTCAACGACAGGCTACAAAAGATGCCAGTGTGATAGCAGGGATGAATGTGATGCGTATCCTTAACGAACCAACAGCCGCAGTTATTGCATACGGTCTTGAAAAAAAGGCCACGACTATTGGTGGTAATAATGTTCTCATCTTTGATCTCGGTGGTGGTACCTTCGATGTTTCCGTACTTAAAATTGAAGACGAAGTTTTTGAGGTAAAAGCTACTGCGGGAGATACACATCTTGGGGGTGAAGATTTTGACAATAAAATTGTTCTTTCTTCAACTGTTGAAACCACCATTGAGATTGATTCTTTATTTGAGGGTATTGACTTCCACTCTAAAATAACGAGAGCGAAATTTGAAGAGCTTAACATGGATCTCTTTGAAAAATGTATGAAGATTGTGAAGGACTGTGTGACCGATGCCAAACTGGATAGGAATATTATTCACGATATTGTTCTTGTTGGTGGATCTAGTAGAATTCCCAAGATACAACAACTGTTGCAAGATTTATTTGATGGCAAGGAGCTTTGCAAGAGCATCAATCCTGATGAAGCAGTTGCATATGGTGCTGCCGTACAAGCCGCAGTTTTGCGAGGTGGTATTGAGAAAGTGCAGGACTTACTCTTGTTGGATGTAATTCCACGTTCACTTGGTTTAGAGCTTGAGAGTAGGGAATTTGGTGTTTTCATCCAAAAAAATAGTACCATTCCCACCAAGAAAACTCAAGTTGCCACAACTAGATATACAAACCAATCATTTTTGATACTTCCTGTGTATGAGGGCGAAGAAACAATAGCCCAAAAAAACAAATTGTTGGGTTATTTTGAGCTCCATGGAATTCCTCGTGGTCCGATAGGGAAACCTCAAATCATTGTTTGTTTCGAGATTGATGCCAATGGAATTTTAATTGTCTCTGTTGAGGAAAAACGACTTCGTATTAAGAACAAGATCGTAATTTCCGATTATAAAGAAGGGTTATCTAAAGTGCAAATTGAGAAGATGATCAAGGAAGCGGAGAAGTACAAGTTAATGGACGAGGAATATAACAAGAAAGTGGAGGCTAAGCCTGCATTGGACGACTGCATATAA
Functional Annotation

Protein Analysis

405

Amino Acids

45.01

Weight (kDa)

5.3

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 6 - 132 4e-56 Hsp70 protein
MreB_Mbl PF06723 29 - 132 4.9e-07 MreB/Mbl protein
HSP70 PF00012 130 - 402 1.7e-83 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 107, 1092
Acc65I GGTACC 1 cut(s) 290
AccB1I GGYRCC 1 cut(s) 290
AciI CCGC 5 cut(s) 20, 210, 350, 708, 1139
AclWI GGATC 2 cut(s) 507, 601
AcsI RAATTY 6 cut(s) 63, 479, 603, 800, 963, 1026
AfaI GTAC 5 cut(s) 292, 309, 702, 829, 1148
AgsI TTSAA 8 cut(s) 39, 137, 233, 320, 405, 413, 485, 509
AluBI AGCT 5 cut(s) 344, 490, 652, 787, 955
AluI AGCT 5 cut(s) 344, 490, 652, 787, 955
Alw21I GWGCWC 1 cut(s) 957
Alw26I GTCTC 1 cut(s) 1042
AlwI GGATC 2 cut(s) 507, 601
AoxI GGCC 2 cut(s) 72, 240
ApeKI GCWGC 1 cut(s) 695
ApoI RAATTY 6 cut(s) 63, 479, 603, 800, 963, 1026
ArsI GACNNNNNNTTYG 2 cut(s) 314, 346
Asp718I GGTACC 1 cut(s) 290
AspS9I GGNCC 1 cut(s) 974
AsuHPI GGTGA 1 cut(s) 383
AvaII GGWCC 1 cut(s) 974
BanI GGYRCC 1 cut(s) 290
BanII GRGCYC 1 cut(s) 957
BauI CACGAG 1 cut(s) 969
BbsI GAAGAC 1 cut(s) 327
Bbv12I GWGCWC 1 cut(s) 957
BbvI GCAGC 1 cut(s) 682
BccI CCATC 1 cut(s) 635
BceAI ACGGC 1 cut(s) 683
BcgI CGANNNNNNTGC 2 cut(s) 998, 1032
BciVI GTATCC 1 cut(s) 200
BclI TGATCA 1 cut(s) 1128
BcoDI GTCTC 1 cut(s) 1042
BfaI CTAG 3 cut(s) 116, 597, 864
BfuI GTATCC 1 cut(s) 200
BisI GCNGC 4 cut(s) 20, 210, 696, 708
BlpI GCTNAGC 1 cut(s) 1188
BlsI GCNGC 4 cut(s) 21, 211, 697, 709
Bme18I GGWCC 1 cut(s) 974
BmgT120I GGNCC 1 cut(s) 974
BmiI GGNNCC 1 cut(s) 292
BmsI GCATC 6 cut(s) 45, 145, 174, 535, 672, 1006
BpiI GAAGAC 1 cut(s) 327
Bpu1102I GCTNAGC 1 cut(s) 1188
BpuEI CTTGAG 2 cut(s) 809, 834
BsaBI GATNNNNATC 2 cut(s) 188, 360
BsaJI CCNNGG 2 cut(s) 79, 958
Bse1I ACTGG 2 cut(s) 159, 558
Bse8I GATNNNNATC 2 cut(s) 188, 360
BseDI CCNNGG 2 cut(s) 79, 958
BseGI GGATG 3 cut(s) 180, 763, 813
BseJI GATNNNNATC 2 cut(s) 188, 360
BseNI ACTGG 2 cut(s) 159, 558
BseXI GCAGC 1 cut(s) 682
BsgI GTGCAG 1 cut(s) 758
BshFI GGCC 2 cut(s) 74, 242
BshNI GGYRCC 1 cut(s) 290
BsiHKAI GWGCWC 1 cut(s) 957
BsmAI GTCTC 1 cut(s) 1042
BsnI GGCC 2 cut(s) 74, 242
Bsp1286I GDGCHC 1 cut(s) 957
Bsp143I GATC 5 cut(s) 277, 499, 593, 1074, 1128
Bsp1720I GCTNAGC 1 cut(s) 1188
Bsp19I CCATGG 1 cut(s) 958
BspACI CCGC 5 cut(s) 20, 210, 350, 708, 1139
BspANI GGCC 2 cut(s) 74, 242
BspLI GGNNCC 1 cut(s) 292
BspPI GGATC 2 cut(s) 507, 601
BspQI GCTCTTC 1 cut(s) 480
BspT107I GGYRCC 1 cut(s) 290
BsrI ACTGG 2 cut(s) 159, 558
BssECI CCNNGG 2 cut(s) 79, 958
BssMI GATC 5 cut(s) 277, 499, 593, 1074, 1128
BssSI CACGAG 1 cut(s) 969
BssT1I CCWWGG 2 cut(s) 79, 958
Bst2BI CACGAG 1 cut(s) 969
Bst4CI ACNGT 5 cut(s) 112, 227, 409, 536, 624
Bst6I CTCTTC 1 cut(s) 480
BstAPI GCANNNNNTGC 2 cut(s) 218, 692
BstC8I GCNNGC 1 cut(s) 1194
BstDEI CTNAG 1 cut(s) 1188
BstDSI CCRYGG 1 cut(s) 958
BstF5I GGATG 3 cut(s) 180, 763, 813
BstKTI GATC 5 cut(s) 280, 502, 596, 1077, 1131
BstMAI GTCTC 1 cut(s) 1042
BstMBI GATC 5 cut(s) 277, 499, 593, 1074, 1128
BstMWI GCNNNNNNNGC 4 cut(s) 218, 692, 704, 1193
BstV1I GCAGC 1 cut(s) 682
BstV2I GAAGAC 1 cut(s) 327
BstX2I RGATCY 2 cut(s) 499, 593
BstYI RGATCY 2 cut(s) 499, 593
BsuI GTATCC 1 cut(s) 200
BsuRI GGCC 2 cut(s) 74, 242
BtgI CCRYGG 1 cut(s) 958
BtsCI GGATG 3 cut(s) 180, 763, 813
BtsIMutI CAGTG 1 cut(s) 166
Cac8I GCNNGC 1 cut(s) 1194
Cfr13I GGNCC 1 cut(s) 974
Csp6I GTAC 5 cut(s) 291, 308, 701, 828, 1147
CspCI CAANNNNNGTGG 2 cut(s) 232, 267
CviAII CATG 2 cut(s) 496, 959
CviQI GTAC 5 cut(s) 291, 308, 701, 828, 1147
DdeI CTNAG 1 cut(s) 1188
DpnI GATC 5 cut(s) 279, 501, 595, 1076, 1130
DpnII GATC 5 cut(s) 277, 499, 593, 1074, 1128
Eam1104I CTCTTC 1 cut(s) 480
EarI CTCTTC 1 cut(s) 480
Ecl136II GAGCTC 1 cut(s) 955
Eco130I CCWWGG 2 cut(s) 79, 958
Eco147I AGGCCT 1 cut(s) 74
Eco24I GRGCYC 1 cut(s) 957
Eco32I GATATC 1 cut(s) 33
Eco47I GGWCC 1 cut(s) 974
Eco53kI GAGCTC 1 cut(s) 955
EcoICRI GAGCTC 1 cut(s) 955
EcoRI GAATTC 2 cut(s) 603, 963
EcoRV GATATC 1 cut(s) 33
EcoT14I CCWWGG 2 cut(s) 79, 958
EcoT38I GRGCYC 1 cut(s) 957
ErhI CCWWGG 2 cut(s) 79, 958
FaeI CATG 2 cut(s) 499, 962
FatI CATG 2 cut(s) 495, 958
FauI CCCGC 1 cut(s) 343
FauNDI CATATG 1 cut(s) 688
FbaI TGATCA 1 cut(s) 1128
Fnu4HI GCNGC 4 cut(s) 20, 210, 696, 708
FokI GGATG 3 cut(s) 187, 770, 800
FriOI GRGCYC 1 cut(s) 957
Fsp4HI GCNGC 4 cut(s) 20, 210, 696, 708
FspBI CTAG 3 cut(s) 116, 597, 864
GluI GCNGC 4 cut(s) 20, 210, 696, 708
HaeIII GGCC 2 cut(s) 74, 242
Hin1II CATG 2 cut(s) 499, 962
HinfI GANTC 1 cut(s) 431
HphI GGTGA 1 cut(s) 383
Hpy166II GTNNAC 1 cut(s) 773
Hpy188I TCNGA 2 cut(s) 978, 1087
Hpy188III TCNNGA 5 cut(s) 68, 230, 572, 671, 1009
Hpy8I GTNNAC 1 cut(s) 773
HpyAV CCTTC 4 cut(s) 19, 304, 523, 1091
HpyCH4III ACNGT 5 cut(s) 112, 227, 409, 536, 624
HpyCH4IV ACGT 1 cut(s) 769
HpyCH4V TGCA 8 cut(s) 221, 628, 657, 686, 739, 1114, 1196, 1209
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 692, 704, 1193
HpyF3I CTNAG 1 cut(s) 1188
HpySE526I ACGT 1 cut(s) 769
Hsp92II CATG 2 cut(s) 499, 962
KpnI GGTACC 1 cut(s) 294
Ksp22I TGATCA 1 cut(s) 1128
Kzo9I GATC 5 cut(s) 277, 499, 593, 1074, 1128
LguI GCTCTTC 1 cut(s) 480
LmnI GCTCC 2 cut(s) 649, 960
LpnPI CCDG 9 cut(s) 81, 128, 156, 172, 539, 684, 725, 909, 1206
Lsp1109I GCAGC 1 cut(s) 682
LweI GCATC 6 cut(s) 45, 145, 174, 535, 672, 1006
MaeI CTAG 3 cut(s) 116, 597, 864
MaeII ACGT 1 cut(s) 769
MaeIII GTNAC 1 cut(s) 538
MalI GATC 5 cut(s) 279, 501, 595, 1076, 1130
MboI GATC 5 cut(s) 277, 499, 593, 1074, 1128
MboII GAAGA 9 cut(s) 16, 27, 332, 386, 393, 497, 532, 923, 1135
MflI RGATCY 2 cut(s) 499, 593
MhlI GDGCHC 1 cut(s) 957
MmeI TCCRAC 1 cut(s) 735
MseI TTAA 7 cut(s) 126, 195, 312, 492, 1031, 1065, 1154
MwoI GCNNNNNNNGC 4 cut(s) 218, 692, 704, 1193
NcoI CCATGG 1 cut(s) 958
NdeI CATATG 1 cut(s) 688
NdeII GATC 5 cut(s) 277, 499, 593, 1074, 1128
NlaIII CATG 2 cut(s) 499, 962
NlaIV GGNNCC 1 cut(s) 292
NmuCI GTSAC 1 cut(s) 538
PceI AGGCCT 1 cut(s) 74
PciSI GCTCTTC 1 cut(s) 480
PcsI WCGNNNNNNNCGW 2 cut(s) 303, 1083
PfeI GAWTC 1 cut(s) 431
PkrI GCNGC 4 cut(s) 21, 211, 697, 709
PsiI TTATAA 2 cut(s) 107, 1092
Psp124BI GAGCTC 1 cut(s) 957
PspN4I GGNNCC 1 cut(s) 292
PspPI GGNCC 1 cut(s) 974
PsuI RGATCY 2 cut(s) 499, 593
RsaI GTAC 5 cut(s) 292, 309, 702, 829, 1148
RsaNI GTAC 5 cut(s) 291, 308, 701, 828, 1147
SacI GAGCTC 1 cut(s) 957
SapI GCTCTTC 1 cut(s) 480
SaqAI TTAA 7 cut(s) 126, 195, 312, 492, 1031, 1065, 1154
SatI GCNGC 4 cut(s) 20, 210, 696, 708
Sau3AI GATC 5 cut(s) 277, 499, 593, 1074, 1128
Sau96I GGNCC 1 cut(s) 974
SduI GDGCHC 1 cut(s) 957
SfaNI GCATC 6 cut(s) 45, 145, 174, 535, 672, 1006
SinI GGWCC 1 cut(s) 974
SmlI CTYRAG 2 cut(s) 788, 849
SmoI CTYRAG 2 cut(s) 788, 849
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 5 cut(s) 20, 210, 350, 708, 1139
SspI AATATT 1 cut(s) 565
SspMI CTAG 3 cut(s) 116, 597, 864
SstI GAGCTC 1 cut(s) 957
StuI AGGCCT 1 cut(s) 74
StyI CCWWGG 2 cut(s) 79, 958
TaaI ACNGT 5 cut(s) 112, 227, 409, 536, 624
TaiI ACGT 1 cut(s) 772
TaqI TCGA 2 cut(s) 297, 1008
TaqII GACCGA 1 cut(s) 557
TatI WGTACW 1 cut(s) 1146
TauI GCSGC 3 cut(s) 22, 212, 710
TfiI GAWTC 1 cut(s) 431
Tru1I TTAA 7 cut(s) 126, 195, 312, 492, 1031, 1065, 1154
Tru9I TTAA 7 cut(s) 126, 195, 312, 492, 1031, 1065, 1154
TscAI CASTG 1 cut(s) 166
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 1 cut(s) 695
Tsp45I GTSAC 1 cut(s) 538
TspDTI ATGAA 5 cut(s) 17, 191, 533, 690, 802
TspGWI ACGGA 1 cut(s) 295
TspRI CASTG 1 cut(s) 166
VpaK11BI GGWCC 1 cut(s) 974
XapI RAATTY 6 cut(s) 63, 479, 603, 800, 963, 1026
XspI CTAG 3 cut(s) 116, 597, 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.