FvH4_4g17040
HSP70 Family

Heat shock 70 kDa protein, mitochondrial

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
N/A
Physical Location & Seq
Reverse (-)
20939345 .. 20939842
498 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g17040.t1

Sequence Viewer

Length: 378 bp
ATGAAAGAAACCGCAAATGCATACCTTGGAAACAATGTCTCAAACACTACAAGCAACAAAGGATGCCGGCAGGATCACAGGCTAGATGTTAAGAGAATCATAAATGAGCCAACTGCTGCTACCCTTTCATATGGTATGAACAATAAGGAAGGTCTAATTGCAGTATTTGACCTCGGTGGTGGAACGTTCGATGTATCCATTCTAGTGTTATACAATGGTGTTTTTGAGGTAAAAGCAACAAATGGTGATACATTTTTGGGAGGAGAAGATTTTGACAATGCTTTGCTAGACTTTTTGGTGAGCGAGTTCAAGAGGACTGAGAGTATTGATCTCTCAAAAGATAGGCTAGCTTTGCCGAGGCTTAGGAAGGCAGTTTAG
Functional Annotation

Protein Analysis

126

Amino Acids

13.73

Weight (kDa)

5.37

Isoelectric Point (pI)

29.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 28 - 124 9.4e-43 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 12
AclI AACGTT 1 cut(s) 185
AclWI GGATC 1 cut(s) 81
AgsI TTSAA 1 cut(s) 310
AluBI AGCT 1 cut(s) 350
AluI AGCT 1 cut(s) 350
Alw26I GTCTC 1 cut(s) 43
AlwI GGATC 1 cut(s) 81
ApeKI GCWGC 1 cut(s) 116
AsuHPI GGTGA 2 cut(s) 257, 310
AsuNHI GCTAGC 1 cut(s) 346
BbvI GCAGC 1 cut(s) 103
BciVI GTATCC 1 cut(s) 205
BcoDI GTCTC 1 cut(s) 43
BfaI CTAG 4 cut(s) 83, 203, 287, 347
BfuI GTATCC 1 cut(s) 205
BisI GCNGC 1 cut(s) 117
BlsI GCNGC 1 cut(s) 118
BmsI GCATC 1 cut(s) 53
BmtI GCTAGC 1 cut(s) 350
Bpu10I CCTNAGC 1 cut(s) 362
BsaJI CCNNGG 3 cut(s) 25, 172, 356
Bse118I RCCGGY 1 cut(s) 66
BseDI CCNNGG 3 cut(s) 25, 172, 356
BseGI GGATG 1 cut(s) 68
BseMII CTCAG 1 cut(s) 309
BseRI GAGGAG 1 cut(s) 276
BseXI GCAGC 1 cut(s) 103
BsiSI CCGG 1 cut(s) 67
BsmAI GTCTC 1 cut(s) 43
Bsp143I GATC 2 cut(s) 73, 328
BspACI CCGC 1 cut(s) 12
BspCNI CTCAG 1 cut(s) 310
BspOI GCTAGC 1 cut(s) 350
BspPI GGATC 1 cut(s) 81
BsrFI RCCGGY 1 cut(s) 66
BssAI RCCGGY 1 cut(s) 66
BssECI CCNNGG 3 cut(s) 25, 172, 356
BssMI GATC 2 cut(s) 73, 328
BssT1I CCWWGG 1 cut(s) 25
BstC8I GCNNGC 2 cut(s) 68, 348
BstDEI CTNAG 2 cut(s) 318, 362
BstF5I GGATG 1 cut(s) 68
BstKTI GATC 2 cut(s) 76, 331
BstMAI GTCTC 1 cut(s) 43
BstMBI GATC 2 cut(s) 73, 328
BstMWI GCNNNNNNNGC 1 cut(s) 352
BstV1I GCAGC 1 cut(s) 103
BsuI GTATCC 1 cut(s) 205
BtsCI GGATG 1 cut(s) 68
Cac8I GCNNGC 2 cut(s) 68, 348
Cfr10I RCCGGY 1 cut(s) 66
CviJI RGCY 5 cut(s) 82, 109, 346, 350, 361
CviKI_1 RGCY 5 cut(s) 82, 109, 346, 350, 361
DdeI CTNAG 2 cut(s) 318, 362
DpnI GATC 2 cut(s) 75, 330
DpnII GATC 2 cut(s) 73, 328
Eco130I CCWWGG 1 cut(s) 25
EcoT14I CCWWGG 1 cut(s) 25
EcoT22I ATGCAT 1 cut(s) 22
ErhI CCWWGG 1 cut(s) 25
FaiI YATR 6 cut(s) 22, 101, 130, 132, 137, 211
FauNDI CATATG 1 cut(s) 130
Fnu4HI GCNGC 1 cut(s) 117
FokI GGATG 1 cut(s) 75
Fsp4HI GCNGC 1 cut(s) 117
FspBI CTAG 4 cut(s) 83, 203, 287, 347
GluI GCNGC 1 cut(s) 117
HapII CCGG 1 cut(s) 67
HinfI GANTC 1 cut(s) 96
HpaII CCGG 1 cut(s) 67
HphI GGTGA 2 cut(s) 257, 310
Hpy188III TCNNGA 1 cut(s) 310
HpyAV CCTTC 2 cut(s) 143, 361
HpyCH4IV ACGT 1 cut(s) 185
HpyCH4V TGCA 2 cut(s) 20, 161
HpyF10VI GCNNNNNNNGC 1 cut(s) 352
HpyF3I CTNAG 2 cut(s) 318, 362
HpySE526I ACGT 1 cut(s) 185
KroI GCCGGC 1 cut(s) 66
KroNI GCCGGC 1 cut(s) 68
Kzo9I GATC 2 cut(s) 73, 328
LpnPI CCDG 3 cut(s) 56, 64, 80
Lsp1109I GCAGC 1 cut(s) 103
LweI GCATC 1 cut(s) 53
MaeI CTAG 4 cut(s) 83, 203, 287, 347
MaeII ACGT 1 cut(s) 185
MalI GATC 2 cut(s) 75, 330
MboI GATC 2 cut(s) 73, 328
MboII GAAGA 1 cut(s) 278
MluCI AATT 1 cut(s) 156
MnlI CCTC 5 cut(s) 182, 220, 254, 306, 351
Mph1103I ATGCAT 1 cut(s) 22
MroNI GCCGGC 1 cut(s) 66
MseI TTAA 1 cut(s) 90
MslI CAYNNNNRTG 1 cut(s) 203
MspI CCGG 1 cut(s) 67
MwoI GCNNNNNNNGC 1 cut(s) 352
NaeI GCCGGC 1 cut(s) 68
NdeI CATATG 1 cut(s) 130
NdeII GATC 2 cut(s) 73, 328
NgoMIV GCCGGC 1 cut(s) 66
NheI GCTAGC 1 cut(s) 346
NsiI ATGCAT 1 cut(s) 22
PdiI GCCGGC 1 cut(s) 68
PfeI GAWTC 1 cut(s) 96
PkrI GCNGC 1 cut(s) 118
Psp1406I AACGTT 1 cut(s) 185
RseI CAYNNNNRTG 1 cut(s) 203
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 1 cut(s) 117
Sau3AI GATC 2 cut(s) 73, 328
SetI ASST 6 cut(s) 27, 154, 174, 188, 231, 352
SfaNI GCATC 1 cut(s) 53
SmiMI CAYNNNNRTG 1 cut(s) 203
Sse9I AATT 1 cut(s) 156
SsiI CCGC 1 cut(s) 12
SspMI CTAG 4 cut(s) 83, 203, 287, 347
StyI CCWWGG 1 cut(s) 25
TaiI ACGT 1 cut(s) 188
TaqI TCGA 1 cut(s) 189
TasI AATT 1 cut(s) 156
TfiI GAWTC 1 cut(s) 96
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TseI GCWGC 1 cut(s) 116
TspDTI ATGAA 3 cut(s) 17, 117, 152
XspI CTAG 4 cut(s) 83, 203, 287, 347
Zsp2I ATGCAT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.