FvH4_5g33870
HSP70 Family

ATP binding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
N/A
Physical Location & Seq
Reverse (-)
24594377 .. 24594733
357 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33870.t1

Sequence Viewer

Length: 357 bp
ATGACCATCTCGAAGTTGCAACAACTTGCAGAAGATGATCTAGGTTGCCTTGTCAAGGAGATAGTGATCACTGTGCCTTCATTCTTCACCAATCTTCAGAGAAAATCGATGATTGATGCCGATACTATAACCGGTCTTGATGTGCTCCAAATCCTAAATGAGGGATCCGCATTGGCTATACACTATGCGGTAGAGAAACAAGTGTCCAGGAAGAAAAGAATATTGATTTTGGACATTAGTGCAGAGACAGTTGATGTATCTATTTGTATGTTGGAGAAAGGACTGTGTGAAGTGGTGGCTACTGTAGGAGATACATCTCTAGGAGGTGTGGATTTTGACAACAAGATTCTAGAATAA
Functional Annotation

Protein Analysis

119

Amino Acids

12.87

Weight (kDa)

4.61

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 118 3.1e-36 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 168, 188
AclWI GGATC 2 cut(s) 159, 172
AcuI CTGAAG 1 cut(s) 80
AfiI CCNNNNNNNGG 2 cut(s) 55, 160
AgeI ACCGGT 1 cut(s) 131
AjnI CCWGG 1 cut(s) 206
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 1 cut(s) 239
AlwI GGATC 2 cut(s) 159, 172
AsiGI ACCGGT 1 cut(s) 131
AsuHPI GGTGA 1 cut(s) 79
BamHI GGATCC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 147
BccI CCATC 1 cut(s) 14
BciT130I CCWGG 1 cut(s) 208
BclI TGATCA 1 cut(s) 66
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 3 cut(s) 41, 320, 350
BfmI CTRYAG 1 cut(s) 303
Bme1390I CCNGG 1 cut(s) 208
BmiI GGNNCC 1 cut(s) 166
BmrFI CCNGG 1 cut(s) 208
BmsI GCATC 1 cut(s) 106
Bsa29I ATCGAT 1 cut(s) 107
BsaBI GATNNNNATC 1 cut(s) 65
BsaWI WCCGGW 1 cut(s) 131
Bsc4I CCNNNNNNNGG 2 cut(s) 55, 160
Bse118I RCCGGY 1 cut(s) 131
Bse8I GATNNNNATC 1 cut(s) 65
BseBI CCWGG 1 cut(s) 208
BseCI ATCGAT 1 cut(s) 107
BseJI GATNNNNATC 1 cut(s) 65
BseLI CCNNNNNNNGG 2 cut(s) 55, 160
BsgI GTGCAG 1 cut(s) 261
BshTI ACCGGT 1 cut(s) 131
BshVI ATCGAT 1 cut(s) 107
BsiHKAI GWGCWC 1 cut(s) 147
BsiSI CCGG 1 cut(s) 132
BslI CCNNNNNNNGG 2 cut(s) 55, 160
BsmAI GTCTC 1 cut(s) 239
Bsp1286I GDGCHC 1 cut(s) 147
Bsp143I GATC 3 cut(s) 37, 66, 164
BspACI CCGC 2 cut(s) 168, 188
BspDI ATCGAT 1 cut(s) 107
BspLI GGNNCC 1 cut(s) 166
BspPI GGATC 2 cut(s) 159, 172
BsrFI RCCGGY 1 cut(s) 131
BssAI RCCGGY 1 cut(s) 131
BssMI GATC 3 cut(s) 37, 66, 164
Bst2UI CCWGG 1 cut(s) 208
Bst4CI ACNGT 4 cut(s) 73, 250, 285, 304
BstENI CCTNNNNNAGG 2 cut(s) 53, 158
BstKTI GATC 3 cut(s) 40, 69, 167
BstMAI GTCTC 1 cut(s) 239
BstMBI GATC 3 cut(s) 37, 66, 164
BstNI CCWGG 1 cut(s) 208
BstSCI CCNGG 1 cut(s) 206
BstSFI CTRYAG 1 cut(s) 303
BstX2I RGATCY 1 cut(s) 164
BstYI RGATCY 1 cut(s) 164
Bsu15I ATCGAT 1 cut(s) 107
BsuTUI ATCGAT 1 cut(s) 107
BtsIMutI CAGTG 1 cut(s) 69
Cfr10I RCCGGY 1 cut(s) 131
ClaI ATCGAT 1 cut(s) 107
CspAI ACCGGT 1 cut(s) 131
CviJI RGCY 2 cut(s) 176, 299
CviKI_1 RGCY 2 cut(s) 176, 299
DpnI GATC 3 cut(s) 39, 68, 166
DpnII GATC 3 cut(s) 37, 66, 164
Eco57I CTGAAG 1 cut(s) 80
EcoNI CCTNNNNNAGG 2 cut(s) 53, 158
EcoRII CCWGG 1 cut(s) 206
FaiI YATR 4 cut(s) 128, 179, 186, 269
FbaI TGATCA 1 cut(s) 66
FspBI CTAG 3 cut(s) 41, 320, 350
HapII CCGG 1 cut(s) 132
HinfI GANTC 1 cut(s) 346
HpaII CCGG 1 cut(s) 132
HphI GGTGA 1 cut(s) 79
Hpy188I TCNGA 1 cut(s) 99
Hpy188III TCNNGA 3 cut(s) 10, 137, 350
HpyAV CCTTC 1 cut(s) 87
HpyCH4III ACNGT 4 cut(s) 73, 250, 285, 304
HpyCH4V TGCA 3 cut(s) 19, 29, 242
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 3 cut(s) 37, 66, 164
LmnI GCTCC 1 cut(s) 150
LpnPI CCDG 3 cut(s) 145, 193, 220
LweI GCATC 1 cut(s) 106
MaeI CTAG 3 cut(s) 41, 320, 350
MalI GATC 3 cut(s) 39, 68, 166
MboI GATC 3 cut(s) 37, 66, 164
MboII GAAGA 4 cut(s) 44, 76, 86, 223
MflI RGATCY 1 cut(s) 164
MhlI GDGCHC 1 cut(s) 147
MmeI TCCRAC 1 cut(s) 252
MnlI CCTC 2 cut(s) 154, 317
MspI CCGG 1 cut(s) 132
MspR9I CCNGG 1 cut(s) 208
MvaI CCWGG 1 cut(s) 208
NdeII GATC 3 cut(s) 37, 66, 164
NlaIV GGNNCC 1 cut(s) 166
PfeI GAWTC 1 cut(s) 346
PfoI TCCNGGA 1 cut(s) 206
PinAI ACCGGT 1 cut(s) 131
Psp6I CCWGG 1 cut(s) 206
PspGI CCWGG 1 cut(s) 206
PspN4I GGNNCC 1 cut(s) 166
PsuI RGATCY 1 cut(s) 164
Sau3AI GATC 3 cut(s) 37, 66, 164
ScrFI CCNGG 1 cut(s) 208
SduI GDGCHC 1 cut(s) 147
SetI ASST 2 cut(s) 46, 328
SfaNI GCATC 1 cut(s) 106
SfcI CTRYAG 1 cut(s) 303
SsiI CCGC 2 cut(s) 168, 188
SspI AATATT 1 cut(s) 222
SspMI CTAG 3 cut(s) 41, 320, 350
StyD4I CCNGG 1 cut(s) 206
TaaI ACNGT 4 cut(s) 73, 250, 285, 304
TaqI TCGA 2 cut(s) 11, 107
TfiI GAWTC 1 cut(s) 346
TscAI CASTG 1 cut(s) 76
TspDTI ATGAA 1 cut(s) 69
TspRI CASTG 1 cut(s) 76
XagI CCTNNNNNAGG 2 cut(s) 53, 158
XbaI TCTAGA 1 cut(s) 349
XspI CTAG 3 cut(s) 41, 320, 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.