FvH4_7g26100
WRKY Family

WRKY Transcription Factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
N/A
Physical Location & Seq
Forward (+)
19813943 .. 19814233
291 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26100.t1

Sequence Viewer

Length: 291 bp
ATGGTCGTCACAGTTTCAACTTTACTTGGCTCGATTGGGGATTCATCGGAGACAGACTACAGGAGCAGATCACATGTTCCTCTCGTATGGTCTGACTATCGCTTTATTCAAGAAGGAGAGTCCGTCAATGAACGCTATTACACTGAGTCCACATTTGAGATTGTGTTAGAAGTTGGAGTCTGTATTCTTGGTTTCAGGAAAGTAGCAACCCCGTCGCATCACAAGCTACAAAGTGGGTATGGTGGCATAGTTGTTTTGAGTCAACCAATCACATCTCGTCTCACAGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

10.68

Weight (kDa)

5.84

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AflIII ACRYGT 1 cut(s) 73
AgsI TTSAA 2 cut(s) 18, 110
AluBI AGCT 1 cut(s) 226
AluI AGCT 1 cut(s) 226
Alw26I GTCTC 2 cut(s) 44, 284
BcgI CGANNNNNNTGC 2 cut(s) 195, 229
BcoDI GTCTC 2 cut(s) 44, 284
BfmI CTRYAG 1 cut(s) 58
BmsI GCATC 1 cut(s) 226
BsaXI ACNNNNNCTCC 2 cut(s) 108, 138
BseMII CTCAG 1 cut(s) 135
BsmAI GTCTC 2 cut(s) 44, 284
BsmBI CGTCTC 1 cut(s) 284
Bsp143I GATC 1 cut(s) 68
BspCNI CTCAG 1 cut(s) 136
BssMI GATC 1 cut(s) 68
Bst4CI ACNGT 2 cut(s) 13, 286
BstDEI CTNAG 1 cut(s) 144
BstKTI GATC 1 cut(s) 71
BstMAI GTCTC 2 cut(s) 44, 284
BstMBI GATC 1 cut(s) 68
BstMWI GCNNNNNNNGC 1 cut(s) 223
BstNSI RCATGY 1 cut(s) 77
BstSFI CTRYAG 1 cut(s) 58
BtsIMutI CAGTG 2 cut(s) 141, 291
CviAII CATG 1 cut(s) 74
CviJI RGCY 2 cut(s) 30, 226
CviKI_1 RGCY 2 cut(s) 30, 226
DdeI CTNAG 1 cut(s) 144
DpnI GATC 1 cut(s) 70
DpnII GATC 1 cut(s) 68
Esp3I CGTCTC 1 cut(s) 284
FaeI CATG 1 cut(s) 77
FaiI YATR 4 cut(s) 75, 88, 240, 248
FatI CATG 1 cut(s) 73
Hin1II CATG 1 cut(s) 77
HincII GTYRAC 1 cut(s) 263
HindII GTYRAC 1 cut(s) 263
HinfI GANTC 5 cut(s) 41, 119, 146, 177, 259
Hpy166II GTNNAC 2 cut(s) 150, 263
Hpy188I TCNGA 2 cut(s) 49, 94
Hpy188III TCNNGA 2 cut(s) 110, 196
Hpy8I GTNNAC 2 cut(s) 150, 263
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 1 cut(s) 107
HpyCH4III ACNGT 2 cut(s) 13, 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 223
HpyF3I CTNAG 1 cut(s) 144
Hsp92II CATG 1 cut(s) 77
Kzo9I GATC 1 cut(s) 68
LmnI GCTCC 1 cut(s) 63
LpnPI CCDG 2 cut(s) 46, 181
LweI GCATC 1 cut(s) 226
MaeIII GTNAC 1 cut(s) 7
MalI GATC 1 cut(s) 70
MboI GATC 1 cut(s) 68
MlyI GAGTC 4 cut(s) 128, 155, 186, 268
MmeI TCCRAC 1 cut(s) 154
MnlI CCTC 1 cut(s) 90
MwoI GCNNNNNNNGC 1 cut(s) 223
NdeII GATC 1 cut(s) 68
NlaIII CATG 1 cut(s) 77
NmuCI GTSAC 1 cut(s) 7
NspI RCATGY 1 cut(s) 77
PciI ACATGT 1 cut(s) 73
PfeI GAWTC 1 cut(s) 41
PleI GAGTC 4 cut(s) 127, 154, 185, 267
PpsI GAGTC 4 cut(s) 127, 154, 185, 267
PscI ACATGT 1 cut(s) 73
Sau3AI GATC 1 cut(s) 68
SchI GAGTC 4 cut(s) 128, 155, 186, 268
SetI ASST 1 cut(s) 228
SfaNI GCATC 1 cut(s) 226
SfcI CTRYAG 1 cut(s) 58
TaaI ACNGT 2 cut(s) 13, 286
TaqI TCGA 1 cut(s) 32
TfiI GAWTC 1 cut(s) 41
TscAI CASTG 2 cut(s) 148, 291
TseFI GTSAC 1 cut(s) 7
Tsp45I GTSAC 1 cut(s) 7
TspDTI ATGAA 2 cut(s) 33, 144
TspGWI ACGGA 1 cut(s) 112
TspRI CASTG 2 cut(s) 148, 291
XceI RCATGY 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.