MD01G1128700.v1.1
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
N/A
Physical Location & Seq
Forward (+)
23999450 .. 23999848
399 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1128700.v1.1.491

Sequence Viewer

Length: 399 bp
ATGTTCCCCAGAATATCTTCTACTTTCAAGCACATATATTATCTTGATCTTCTTACTCTGCTGCCGTTCAGTTCTCTTCTTAGTACTGTTCTTCTTCCAGTTTCTCAGCTTAGAATGGCGGGAAAAGACAAAGCTGCAAGTCACCACTCGTGTGTGTGTGGTGGCAGTGATCATCATGTAGAAATCATAGTGAACGATCAGGGCAACAGGACCACTCCATCTTATGTTGCTTTTACAAATACTGAGCGATTGATAGGTGATGGTGCATTCAACCAGGTCATAAAAAACCCAACCAATACACCATCTTCGGTATGTTCATCTCTTCCTGTATGTATCCATCTACATATATACCATTTTCCCATTAATTTATTTCTCAAATTAGTTTTTATTTTTCTCTGA
Functional Annotation

Protein Analysis

133

Amino Acids

14.7

Weight (kDa)

8.42

Isoelectric Point (pI)

37.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 49 - 103 2.6e-14 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 119
AfaI GTAC 1 cut(s) 85
AgsI TTSAA 2 cut(s) 28, 271
AjnI CCWGG 1 cut(s) 273
AleI CACNNNNGTG 1 cut(s) 150
AluBI AGCT 2 cut(s) 109, 134
AluI AGCT 2 cut(s) 109, 134
ApeKI GCWGC 2 cut(s) 61, 134
AseI ATTAAT 1 cut(s) 363
Asp700I GAANNNNTTC 1 cut(s) 16
AspS9I GGNCC 1 cut(s) 210
AsuHPI GGTGA 2 cut(s) 134, 269
AvaII GGWCC 1 cut(s) 210
BauI CACGAG 1 cut(s) 148
BbvI GCAGC 2 cut(s) 48, 121
BccI CCATC 4 cut(s) 226, 254, 310, 345
BceAI ACGGC 1 cut(s) 49
BciT130I CCWGG 1 cut(s) 275
BciVI GTATCC 1 cut(s) 344
BclI TGATCA 1 cut(s) 169
BfuI GTATCC 1 cut(s) 344
BisI GCNGC 2 cut(s) 62, 135
BlsI GCNGC 2 cut(s) 63, 136
BmcAI AGTACT 1 cut(s) 85
Bme1390I CCNGG 1 cut(s) 275
Bme18I GGWCC 1 cut(s) 210
BmgT120I GGNCC 1 cut(s) 210
BmrFI CCNGG 1 cut(s) 275
Bse1I ACTGG 1 cut(s) 98
BseBI CCWGG 1 cut(s) 275
BseMII CTCAG 2 cut(s) 119, 234
BseNI ACTGG 1 cut(s) 98
BseXI GCAGC 2 cut(s) 48, 121
BsmI GAATGC 1 cut(s) 266
Bsp143I GATC 3 cut(s) 46, 169, 196
BspACI CCGC 1 cut(s) 119
BspCNI CTCAG 2 cut(s) 118, 235
BsrI ACTGG 1 cut(s) 98
BssMI GATC 3 cut(s) 46, 169, 196
BssSI CACGAG 1 cut(s) 148
Bst2BI CACGAG 1 cut(s) 148
Bst2UI CCWGG 1 cut(s) 275
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 2 cut(s) 81, 327
BstDEI CTNAG 4 cut(s) 80, 105, 110, 243
BstKTI GATC 3 cut(s) 49, 172, 199
BstMBI GATC 3 cut(s) 46, 169, 196
BstNI CCWGG 1 cut(s) 275
BstSCI CCNGG 1 cut(s) 273
BstV1I GCAGC 2 cut(s) 48, 121
BsuI GTATCC 1 cut(s) 344
BtsI GCAGTG 1 cut(s) 172
BtsIMutI CAGTG 1 cut(s) 172
Cfr13I GGNCC 1 cut(s) 210
CsiI ACCWGGT 1 cut(s) 273
Csp6I GTAC 1 cut(s) 84
CviAII CATG 1 cut(s) 176
CviJI RGCY 2 cut(s) 109, 134
CviKI_1 RGCY 2 cut(s) 109, 134
CviQI GTAC 1 cut(s) 84
DdeI CTNAG 4 cut(s) 80, 105, 110, 243
DpnI GATC 3 cut(s) 48, 171, 198
DpnII GATC 3 cut(s) 46, 169, 196
Eam1104I CTCTTC 2 cut(s) 81, 327
EarI CTCTTC 2 cut(s) 81, 327
Eco47I GGWCC 1 cut(s) 210
EcoRII CCWGG 1 cut(s) 273
FaeI CATG 1 cut(s) 179
FatI CATG 1 cut(s) 175
FauI CCCGC 1 cut(s) 112
FbaI TGATCA 1 cut(s) 169
Fnu4HI GCNGC 2 cut(s) 62, 135
Fsp4HI GCNGC 2 cut(s) 62, 135
GluI GCNGC 2 cut(s) 62, 135
Hin1II CATG 1 cut(s) 179
HphI GGTGA 2 cut(s) 134, 269
Hpy166II GTNNAC 1 cut(s) 193
Hpy188I TCNGA 1 cut(s) 398
Hpy188III TCNNGA 1 cut(s) 44
Hpy8I GTNNAC 1 cut(s) 193
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 2 cut(s) 137, 266
HpyF3I CTNAG 4 cut(s) 80, 105, 110, 243
Hsp92II CATG 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 169
Kzo9I GATC 3 cut(s) 46, 169, 196
LpnPI CCDG 7 cut(s) 22, 111, 185, 193, 260, 287, 339
Lsp1109I GCAGC 2 cut(s) 48, 121
MabI ACCWGGT 1 cut(s) 273
MaeIII GTNAC 1 cut(s) 140
MalI GATC 3 cut(s) 48, 171, 198
MboI GATC 3 cut(s) 46, 169, 196
MboII GAAGA 7 cut(s) 9, 41, 68, 83, 86, 297, 314
MluCI AATT 2 cut(s) 364, 377
MroXI GAANNNNTTC 1 cut(s) 16
MseI TTAA 1 cut(s) 363
MslI CAYNNNNRTG 1 cut(s) 150
MspR9I CCNGG 1 cut(s) 275
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 1 cut(s) 275
NdeII GATC 3 cut(s) 46, 169, 196
NlaIII CATG 1 cut(s) 179
NmuCI GTSAC 1 cut(s) 140
OliI CACNNNNGTG 1 cut(s) 150
PctI GAATGC 1 cut(s) 266
PdmI GAANNNNTTC 1 cut(s) 16
PkrI GCNGC 2 cut(s) 63, 136
PshBI ATTAAT 1 cut(s) 363
Psp6I CCWGG 1 cut(s) 273
PspGI CCWGG 1 cut(s) 273
PspPI GGNCC 1 cut(s) 210
RsaI GTAC 1 cut(s) 85
RsaNI GTAC 1 cut(s) 84
RseI CAYNNNNRTG 1 cut(s) 150
SaqAI TTAA 1 cut(s) 363
SatI GCNGC 2 cut(s) 62, 135
Sau3AI GATC 3 cut(s) 46, 169, 196
Sau96I GGNCC 1 cut(s) 210
ScaI AGTACT 1 cut(s) 85
ScrFI CCNGG 1 cut(s) 275
SetI ASST 4 cut(s) 111, 136, 259, 279
SexAI ACCWGGT 1 cut(s) 273
SinI GGWCC 1 cut(s) 210
SmiMI CAYNNNNRTG 1 cut(s) 150
Sse9I AATT 2 cut(s) 364, 377
SsiI CCGC 1 cut(s) 119
StyD4I CCNGG 1 cut(s) 273
TaaI ACNGT 1 cut(s) 88
TasI AATT 2 cut(s) 364, 377
TatI WGTACW 1 cut(s) 83
Tru1I TTAA 1 cut(s) 363
Tru9I TTAA 1 cut(s) 363
TscAI CASTG 1 cut(s) 172
TseFI GTSAC 1 cut(s) 140
TseI GCWGC 2 cut(s) 61, 134
Tsp45I GTSAC 1 cut(s) 140
TspDTI ATGAA 1 cut(s) 306
TspRI CASTG 1 cut(s) 172
VpaK11BI GGWCC 1 cut(s) 210
VspI ATTAAT 1 cut(s) 363
XmnI GAANNNNTTC 1 cut(s) 16
ZrmI AGTACT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.