MD01G1133200.v1.1
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
N/A
Physical Location & Seq
Forward (+)
24312694 .. 24313569
876 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1133200.v1.1.491

Sequence Viewer

Length: 540 bp
ATGGCGGGAAAAGACAAAGCTGAAGGTCATGCAATCGGGATCGACCTGGGGACAACGTGTGTGGCGGTGTGGCAGTATGATCATGTAGAAATTATAGTGAACGATCAGGGTAGCAGGACAACTCCATCTCACGTTGCATTCACTGATGCCGAAATACTGGTTGGTGATGCTGCATTTAACCAGCTCATCAGAAACCCTTCCAACTCCATCTTTGATGCAAAGCGATTAATTGGTAGAAGATTTAGTGACTCATGTGTTCAAGATGATATTAAGTTGTGGCCTTTCAAGGTCATCGAAGGTCCTCATGATAAGCCTACGATTGTGGTCACTCACAAGGGCCAAGAGAAGCAGTTTGCTGCTGAAGAAATCTCATCAATGGTATTGGGAAAGATGCGAGAGAGATTGCTGAGGCCTTCCTCGGCTCAACTGTTAAGAGTGCGGTCGTCACAGTCCCTGCTTACTTCAGTGACTCACAGCGTCAGGCTACAAAAAAAATGCAGCTATGAGTGCCGGCCTAAAGGTGCTGCGTGTCATCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

180

Amino Acids

19.87

Weight (kDa)

8.85

Isoelectric Point (pI)

52.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 11 - 134 3.5e-41 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 5, 65, 439
AclWI GGATC 1 cut(s) 47
AcuI CTGAAG 3 cut(s) 42, 381, 447
AflIII ACRYGT 1 cut(s) 56
AgsI TTSAA 2 cut(s) 260, 286
AjnI CCWGG 1 cut(s) 45
AjuI GAANNNNNNNTTGG 2 cut(s) 144, 176
AluBI AGCT 3 cut(s) 20, 184, 501
AluI AGCT 3 cut(s) 20, 184, 501
AlwI GGATC 1 cut(s) 47
AlwNI CAGNNNCTG 1 cut(s) 454
AoxI GGCC 4 cut(s) 278, 337, 410, 512
ApeKI GCWGC 4 cut(s) 170, 356, 498, 524
AseI ATTAAT 1 cut(s) 227
Asp700I GAANNNNTTC 1 cut(s) 196
AspS9I GGNCC 2 cut(s) 299, 337
AsuHPI GGTGA 1 cut(s) 176
AvaII GGWCC 1 cut(s) 299
BbvCI CCTCAGC 1 cut(s) 407
BbvI GCAGC 4 cut(s) 157, 343, 510, 511
BccI CCATC 2 cut(s) 133, 215
BciT130I CCWGG 1 cut(s) 47
BclI TGATCA 1 cut(s) 79
BisI GCNGC 4 cut(s) 171, 357, 499, 525
BlsI GCNGC 4 cut(s) 172, 358, 500, 526
Bme1390I CCNGG 1 cut(s) 47
Bme18I GGWCC 1 cut(s) 299
BmgT120I GGNCC 2 cut(s) 299, 337
BmrFI CCNGG 1 cut(s) 47
BmsI GCATC 4 cut(s) 136, 157, 205, 381
Bpu10I CCTNAGC 1 cut(s) 407
BsaJI CCNNGG 2 cut(s) 46, 417
Bse118I RCCGGY 1 cut(s) 510
Bse1I ACTGG 1 cut(s) 162
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 2 cut(s) 46, 417
BseMII CTCAG 1 cut(s) 398
BseNI ACTGG 1 cut(s) 162
BseXI GCAGC 4 cut(s) 157, 343, 510, 511
Bsh1285I CGRYCG 1 cut(s) 443
BshFI GGCC 4 cut(s) 280, 339, 412, 514
BsiEI CGRYCG 1 cut(s) 443
BsiSI CCGG 1 cut(s) 511
BslFI GGGAC 2 cut(s) 64, 436
BsmFI GGGAC 2 cut(s) 64, 436
BsmI GAATGC 1 cut(s) 137
BsnI GGCC 4 cut(s) 280, 339, 412, 514
Bsp143I GATC 3 cut(s) 39, 79, 103
BspACI CCGC 3 cut(s) 5, 65, 439
BspANI GGCC 4 cut(s) 280, 339, 412, 514
BspCNI CTCAG 1 cut(s) 399
BspHI TCATGA 1 cut(s) 304
BspPI GGATC 1 cut(s) 47
BsrFI RCCGGY 1 cut(s) 510
BsrI ACTGG 1 cut(s) 162
BssAI RCCGGY 1 cut(s) 510
BssECI CCNNGG 2 cut(s) 46, 417
BssMI GATC 3 cut(s) 39, 79, 103
Bst2UI CCWGG 1 cut(s) 47
Bst4CI ACNGT 2 cut(s) 429, 450
BstC8I GCNNGC 1 cut(s) 512
BstDEI CTNAG 1 cut(s) 407
BstKTI GATC 3 cut(s) 42, 82, 106
BstMBI GATC 3 cut(s) 39, 79, 103
BstMCI CGRYCG 1 cut(s) 443
BstMWI GCNNNNNNNGC 1 cut(s) 507
BstNI CCWGG 1 cut(s) 47
BstSCI CCNGG 1 cut(s) 45
BstV1I GCAGC 4 cut(s) 157, 343, 510, 511
BsuRI GGCC 4 cut(s) 280, 339, 412, 514
BtsIMutI CAGTG 2 cut(s) 141, 471
Cac8I GCNNGC 1 cut(s) 512
CaiI CAGNNNCTG 1 cut(s) 454
CciI TCATGA 1 cut(s) 304
Cfr10I RCCGGY 1 cut(s) 510
Cfr13I GGNCC 2 cut(s) 299, 337
CseI GACGC 1 cut(s) 466
CspCI CAANNNNNGTGG 2 cut(s) 42, 77
CviAII CATG 4 cut(s) 29, 83, 252, 305
DdeI CTNAG 1 cut(s) 407
DpnI GATC 3 cut(s) 41, 81, 105
DpnII GATC 3 cut(s) 39, 79, 103
Eco147I AGGCCT 1 cut(s) 412
Eco47I GGWCC 1 cut(s) 299
Eco57I CTGAAG 3 cut(s) 42, 381, 447
EcoO109I RGGNCCY 1 cut(s) 299
EcoRII CCWGG 1 cut(s) 45
FaeI CATG 4 cut(s) 32, 86, 255, 308
FaiI YATR 7 cut(s) 30, 78, 84, 95, 253, 306, 504
FaqI GGGAC 2 cut(s) 64, 436
FatI CATG 4 cut(s) 28, 82, 251, 304
FbaI TGATCA 1 cut(s) 79
Fnu4HI GCNGC 4 cut(s) 171, 357, 499, 525
Fsp4HI GCNGC 4 cut(s) 171, 357, 499, 525
GluI GCNGC 4 cut(s) 171, 357, 499, 525
HaeIII GGCC 4 cut(s) 280, 339, 412, 514
HapII CCGG 1 cut(s) 511
HgaI GACGC 1 cut(s) 466
Hin1II CATG 4 cut(s) 32, 86, 255, 308
HinfI GANTC 2 cut(s) 248, 469
HpaII CCGG 1 cut(s) 511
HphI GGTGA 1 cut(s) 176
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 1 cut(s) 191
Hpy188III TCNNGA 3 cut(s) 37, 260, 305
Hpy8I GTNNAC 1 cut(s) 100
HpyAV CCTTC 4 cut(s) 17, 207, 290, 423
HpyCH4III ACNGT 2 cut(s) 429, 450
HpyCH4IV ACGT 2 cut(s) 56, 132
HpyCH4V TGCA 5 cut(s) 32, 137, 173, 218, 498
HpyF10VI GCNNNNNNNGC 1 cut(s) 507
HpyF3I CTNAG 1 cut(s) 407
HpySE526I ACGT 2 cut(s) 56, 132
Hsp92II CATG 4 cut(s) 32, 86, 255, 308
KroI GCCGGC 1 cut(s) 510
KroNI GCCGGC 1 cut(s) 512
Ksp22I TGATCA 1 cut(s) 79
Kzo9I GATC 3 cut(s) 39, 79, 103
LpnPI CCDG 9 cut(s) 32, 59, 92, 100, 143, 194, 466, 467, 524
Lsp1109I GCAGC 4 cut(s) 157, 343, 510, 511
LweI GCATC 4 cut(s) 136, 157, 205, 381
MaeII ACGT 2 cut(s) 56, 132
MaeIII GTNAC 4 cut(s) 245, 325, 444, 466
MalI GATC 3 cut(s) 41, 81, 105
MboI GATC 3 cut(s) 39, 79, 103
MboII GAAGA 2 cut(s) 249, 374
MluCI AATT 2 cut(s) 90, 228
MlyI GAGTC 2 cut(s) 242, 463
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 3 cut(s) 312, 402, 427
MroNI GCCGGC 1 cut(s) 510
MroXI GAANNNNTTC 1 cut(s) 196
MseI TTAA 4 cut(s) 177, 227, 270, 431
MspI CCGG 1 cut(s) 511
MspR9I CCNGG 1 cut(s) 47
Mva1269I GAATGC 1 cut(s) 137
MvaI CCWGG 1 cut(s) 47
MwoI GCNNNNNNNGC 1 cut(s) 507
NaeI GCCGGC 1 cut(s) 512
NdeII GATC 3 cut(s) 39, 79, 103
NgoMIV GCCGGC 1 cut(s) 510
NlaIII CATG 4 cut(s) 32, 86, 255, 308
NmeAIII GCCGAG 1 cut(s) 398
NmuCI GTSAC 4 cut(s) 245, 325, 444, 466
PagI TCATGA 1 cut(s) 304
PceI AGGCCT 1 cut(s) 412
PctI GAATGC 1 cut(s) 137
PdiI GCCGGC 1 cut(s) 512
PdmI GAANNNNTTC 1 cut(s) 196
PkrI GCNGC 4 cut(s) 172, 358, 500, 526
PleI GAGTC 2 cut(s) 242, 463
PpsI GAGTC 2 cut(s) 242, 463
PpuMI RGGWCCY 1 cut(s) 299
PshBI ATTAAT 1 cut(s) 227
Psp5II RGGWCCY 1 cut(s) 299
Psp6I CCWGG 1 cut(s) 45
PspGI CCWGG 1 cut(s) 45
PspPI GGNCC 2 cut(s) 299, 337
PspPPI RGGWCCY 1 cut(s) 299
PstNI CAGNNNCTG 1 cut(s) 454
SaqAI TTAA 4 cut(s) 177, 227, 270, 431
SatI GCNGC 4 cut(s) 171, 357, 499, 525
Sau3AI GATC 3 cut(s) 39, 79, 103
Sau96I GGNCC 2 cut(s) 299, 337
SchI GAGTC 2 cut(s) 242, 463
ScrFI CCNGG 1 cut(s) 47
SfaNI GCATC 4 cut(s) 136, 157, 205, 381
SinI GGWCC 1 cut(s) 299
Sse9I AATT 2 cut(s) 90, 228
SseBI AGGCCT 1 cut(s) 412
SsiI CCGC 3 cut(s) 5, 65, 439
StuI AGGCCT 1 cut(s) 412
StyD4I CCNGG 1 cut(s) 45
TaaI ACNGT 2 cut(s) 429, 450
TaiI ACGT 2 cut(s) 59, 135
TaqI TCGA 2 cut(s) 42, 294
TasI AATT 2 cut(s) 90, 228
Tru1I TTAA 4 cut(s) 177, 227, 270, 431
Tru9I TTAA 4 cut(s) 177, 227, 270, 431
TscAI CASTG 2 cut(s) 148, 471
TseFI GTSAC 4 cut(s) 245, 325, 444, 466
TseI GCWGC 4 cut(s) 170, 356, 498, 524
Tsp45I GTSAC 4 cut(s) 245, 325, 444, 466
TspRI CASTG 2 cut(s) 148, 471
VpaK11BI GGWCC 1 cut(s) 299
VspI ATTAAT 1 cut(s) 227
XmnI GAANNNNTTC 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.