MD05G1159300.v1.1
NAC Family

protein transport

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
N/A
Physical Location & Seq
Forward (+)
28793528 .. 28793782
255 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1159300.v1.1.491

Sequence Viewer

Length: 255 bp
ATGGTAGATGTTGATTGGTTGTTCTTTTTTTGTGTGTTTCGGATACTATATGTCATATTGAAATCCAATGCCTTCAAGAGTCCAAAATCTGATACCTATTTCATATTTGGCGAGGCCAAGATCGAGGATTTGAGCTCTCAGCTGCAGACACAGGGTGCCCAGCAGTCCAGGATGCCAGACATGAGTTATGTGATGGGGAAAGCAGAGATTTCTGGAGCAGCTGCTCGTCCTCAGGCAGATGAAGAAGAGGAATAG
Functional Annotation

Protein Analysis

85

Amino Acids

9.55

Weight (kDa)

4.57

Isoelectric Point (pI)

59.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 155
AdeI CACNNNGTG 1 cut(s) 155
AgsI TTSAA 2 cut(s) 61, 76
AjnI CCWGG 1 cut(s) 167
AluBI AGCT 3 cut(s) 135, 142, 221
AluI AGCT 3 cut(s) 135, 142, 221
Alw21I GWGCWC 1 cut(s) 137
AoxI GGCC 1 cut(s) 114
ApeKI GCWGC 3 cut(s) 142, 218, 221
AxyI CCTNAGG 1 cut(s) 231
BaeGI GKGCMC 1 cut(s) 160
BanI GGYRCC 1 cut(s) 155
BanII GRGCYC 1 cut(s) 137
Bbv12I GWGCWC 1 cut(s) 137
BbvI GCAGC 3 cut(s) 129, 208, 230
BccI CCATC 1 cut(s) 187
BciT130I CCWGG 1 cut(s) 169
BciVI GTATCC 1 cut(s) 36
BfmI CTRYAG 1 cut(s) 143
BfuI GTATCC 1 cut(s) 36
BisI GCNGC 3 cut(s) 143, 219, 222
BlsI GCNGC 3 cut(s) 144, 220, 223
Bme1390I CCNGG 1 cut(s) 169
BmiI GGNNCC 1 cut(s) 157
BmrFI CCNGG 1 cut(s) 169
BmsI GCATC 1 cut(s) 162
BpmI CTGGAG 1 cut(s) 234
Bse21I CCTNAGG 1 cut(s) 231
BseBI CCWGG 1 cut(s) 169
BseGI GGATG 1 cut(s) 177
BseMII CTCAG 2 cut(s) 152, 245
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 3 cut(s) 129, 208, 230
BseYI CCCAGC 1 cut(s) 159
BshFI GGCC 1 cut(s) 116
BshNI GGYRCC 1 cut(s) 155
BsiHKAI GWGCWC 1 cut(s) 137
BsnI GGCC 1 cut(s) 116
Bsp1286I GDGCHC 2 cut(s) 137, 160
Bsp143I GATC 1 cut(s) 120
BspANI GGCC 1 cut(s) 116
BspCNI CTCAG 2 cut(s) 151, 244
BspLI GGNNCC 1 cut(s) 157
BspMAI CTGCAG 1 cut(s) 147
BspT107I GGYRCC 1 cut(s) 155
BssMI GATC 1 cut(s) 120
Bst2UI CCWGG 1 cut(s) 169
Bst6I CTCTTC 1 cut(s) 240
BstDEI CTNAG 2 cut(s) 138, 231
BstF5I GGATG 1 cut(s) 177
BstKTI GATC 1 cut(s) 123
BstMBI GATC 1 cut(s) 120
BstNI CCWGG 1 cut(s) 169
BstSCI CCNGG 1 cut(s) 167
BstSFI CTRYAG 1 cut(s) 143
BstSLI GKGCMC 1 cut(s) 160
BstV1I GCAGC 3 cut(s) 129, 208, 230
Bsu36I CCTNAGG 1 cut(s) 231
BsuI GTATCC 1 cut(s) 36
BsuRI GGCC 1 cut(s) 116
BtsCI GGATG 1 cut(s) 177
CviAII CATG 1 cut(s) 181
CviJI RGCY 4 cut(s) 116, 135, 142, 221
CviKI_1 RGCY 4 cut(s) 116, 135, 142, 221
DdeI CTNAG 2 cut(s) 138, 231
DpnI GATC 1 cut(s) 122
DpnII GATC 1 cut(s) 120
DraIII CACNNNGTG 1 cut(s) 155
Eam1104I CTCTTC 1 cut(s) 240
EarI CTCTTC 1 cut(s) 240
Ecl136II GAGCTC 1 cut(s) 135
Eco24I GRGCYC 1 cut(s) 137
Eco53kI GAGCTC 1 cut(s) 135
Eco81I CCTNAGG 1 cut(s) 231
EcoICRI GAGCTC 1 cut(s) 135
EcoRII CCWGG 1 cut(s) 167
EcoT38I GRGCYC 1 cut(s) 137
FaeI CATG 1 cut(s) 184
FaiI YATR 6 cut(s) 49, 51, 56, 104, 182, 189
FatI CATG 1 cut(s) 180
Fnu4HI GCNGC 3 cut(s) 143, 219, 222
FokI GGATG 1 cut(s) 184
FriOI GRGCYC 1 cut(s) 137
Fsp4HI GCNGC 3 cut(s) 143, 219, 222
GluI GCNGC 3 cut(s) 143, 219, 222
GsaI CCCAGC 1 cut(s) 163
GsuI CTGGAG 1 cut(s) 234
HaeIII GGCC 1 cut(s) 116
Hin1II CATG 1 cut(s) 184
HinfI GANTC 1 cut(s) 79
Hpy188I TCNGA 2 cut(s) 42, 91
Hpy188III TCNNGA 2 cut(s) 76, 213
HpyAV CCTTC 1 cut(s) 82
HpyCH4V TGCA 1 cut(s) 145
HpyF3I CTNAG 2 cut(s) 138, 231
Hsp92II CATG 1 cut(s) 184
Kzo9I GATC 1 cut(s) 120
LmnI GCTCC 1 cut(s) 215
LpnPI CCDG 7 cut(s) 137, 154, 173, 181, 189, 198, 218
Lsp1109I GCAGC 3 cut(s) 129, 208, 230
LweI GCATC 1 cut(s) 162
MalI GATC 1 cut(s) 122
MboI GATC 1 cut(s) 120
MboII GAAGA 1 cut(s) 254
MhlI GDGCHC 2 cut(s) 137, 160
MlyI GAGTC 1 cut(s) 88
MnlI CCTC 4 cut(s) 106, 118, 240, 241
MspA1I CMGCKG 2 cut(s) 142, 221
MspR9I CCNGG 1 cut(s) 169
MvaI CCWGG 1 cut(s) 169
NdeII GATC 1 cut(s) 120
NlaIII CATG 1 cut(s) 184
NlaIV GGNNCC 1 cut(s) 157
PfoI TCCNGGA 1 cut(s) 167
PkrI GCNGC 3 cut(s) 144, 220, 223
PleI GAGTC 1 cut(s) 87
PpsI GAGTC 1 cut(s) 87
Psp124BI GAGCTC 1 cut(s) 137
Psp6I CCWGG 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 159
PspGI CCWGG 1 cut(s) 167
PspN4I GGNNCC 1 cut(s) 157
PstI CTGCAG 1 cut(s) 147
PvuII CAGCTG 2 cut(s) 142, 221
SacI GAGCTC 1 cut(s) 137
SatI GCNGC 3 cut(s) 143, 219, 222
Sau3AI GATC 1 cut(s) 120
SchI GAGTC 1 cut(s) 88
ScrFI CCNGG 1 cut(s) 169
SduI GDGCHC 2 cut(s) 137, 160
SetI ASST 4 cut(s) 98, 137, 144, 223
SfaNI GCATC 1 cut(s) 162
SfcI CTRYAG 1 cut(s) 143
SstI GAGCTC 1 cut(s) 137
StyD4I CCNGG 1 cut(s) 167
TaqI TCGA 1 cut(s) 123
TseI GCWGC 3 cut(s) 142, 218, 221
TspDTI ATGAA 2 cut(s) 91, 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.