MD12G1024200.v1.1
BZIP Family

Protein ABSCISIC ACID-INSENSITIVE

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
N/A
Physical Location & Seq
Forward (+)
2460773 .. 2461078
306 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1024200.v1.1.491

Sequence Viewer

Length: 306 bp
ATGGGTGTTTCGGAGTCGGAAATCATCTCCCAAGGCAAGGTGGATTCACCTTTGTTATCGGACCAACAAGAGAAGAACCAGTTATTCTCTTCATTAGGAAGACAATCATCAATCTACTCTCTCACTCTTGATGAGTTTCAGCACACCCTCTGCGAGAGTGGCAAGAATTTTGGGTCGATGAATATGGATGAGTTCCTCACAAGCATTTGGACCGCCGAAGAAAACCAAGCCATTAATTCCAATCACACACCAACACTTCCACTACTAACAACAACACGAACAACATTGAGGTGCACATGCCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

11.25

Weight (kDa)

4.63

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 213
AcsI RAATTY 1 cut(s) 166
AfiI CCNNNNNNNGG 1 cut(s) 37
Alw21I GWGCWC 1 cut(s) 296
Alw44I GTGCAC 1 cut(s) 292
ApaLI GTGCAC 1 cut(s) 292
ApoI RAATTY 1 cut(s) 166
AseI ATTAAT 1 cut(s) 234
AspS9I GGNCC 2 cut(s) 61, 210
AsuHPI GGTGA 1 cut(s) 39
AvaII GGWCC 2 cut(s) 61, 210
BaeGI GKGCMC 1 cut(s) 296
BbsI GAAGAC 1 cut(s) 106
Bbv12I GWGCWC 1 cut(s) 296
Bme18I GGWCC 2 cut(s) 61, 210
BmgT120I GGNCC 2 cut(s) 61, 210
BpiI GAAGAC 1 cut(s) 106
BsaJI CCNNGG 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 37
Bse1I ACTGG 1 cut(s) 79
BseDI CCNNGG 1 cut(s) 31
BseGI GGATG 1 cut(s) 193
BseLI CCNNNNNNNGG 1 cut(s) 37
BseNI ACTGG 1 cut(s) 79
BseSI GKGCMC 1 cut(s) 296
BsiHKAI GWGCWC 1 cut(s) 296
BslI CCNNNNNNNGG 1 cut(s) 37
Bsp1286I GDGCHC 1 cut(s) 296
BspACI CCGC 1 cut(s) 213
BsrI ACTGG 1 cut(s) 79
BssECI CCNNGG 1 cut(s) 31
BssT1I CCWWGG 1 cut(s) 31
Bst6I CTCTTC 1 cut(s) 94
BstF5I GGATG 1 cut(s) 193
BstMWI GCNNNNNNNGC 1 cut(s) 159
BstNSI RCATGY 1 cut(s) 300
BstSLI GKGCMC 1 cut(s) 296
BstV2I GAAGAC 1 cut(s) 106
BtsCI GGATG 1 cut(s) 193
Cfr13I GGNCC 2 cut(s) 61, 210
CviAII CATG 1 cut(s) 297
CviJI RGCY 1 cut(s) 230
CviKI_1 RGCY 1 cut(s) 230
Eam1104I CTCTTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 94
Eco130I CCWWGG 1 cut(s) 31
Eco47I GGWCC 2 cut(s) 61, 210
EcoT14I CCWWGG 1 cut(s) 31
ErhI CCWWGG 1 cut(s) 31
FaeI CATG 1 cut(s) 300
FaiI YATR 2 cut(s) 185, 298
FatI CATG 1 cut(s) 296
FokI GGATG 1 cut(s) 200
Hin1II CATG 1 cut(s) 300
HinfI GANTC 2 cut(s) 14, 44
HphI GGTGA 1 cut(s) 39
Hpy166II GTNNAC 1 cut(s) 294
Hpy188I TCNGA 3 cut(s) 13, 19, 61
Hpy188III TCNNGA 1 cut(s) 128
Hpy8I GTNNAC 1 cut(s) 294
HpyCH4V TGCA 1 cut(s) 294
HpyF10VI GCNNNNNNNGC 1 cut(s) 159
Hsp92II CATG 1 cut(s) 300
LpnPI CCDG 1 cut(s) 92
MboII GAAGA 4 cut(s) 81, 85, 111, 230
MhlI GDGCHC 1 cut(s) 296
MluCI AATT 2 cut(s) 166, 235
MlyI GAGTC 1 cut(s) 23
MnlI CCTC 3 cut(s) 158, 206, 282
MseI TTAA 1 cut(s) 234
MslI CAYNNNNRTG 1 cut(s) 289
MwoI GCNNNNNNNGC 1 cut(s) 159
NlaIII CATG 1 cut(s) 300
NspI RCATGY 1 cut(s) 300
PfeI GAWTC 1 cut(s) 44
PleI GAGTC 1 cut(s) 22
PpsI GAGTC 1 cut(s) 22
PshBI ATTAAT 1 cut(s) 234
PspPI GGNCC 2 cut(s) 61, 210
RseI CAYNNNNRTG 1 cut(s) 289
SaqAI TTAA 1 cut(s) 234
Sau96I GGNCC 2 cut(s) 61, 210
SchI GAGTC 1 cut(s) 23
SduI GDGCHC 1 cut(s) 296
SetI ASST 3 cut(s) 42, 52, 293
SinI GGWCC 2 cut(s) 61, 210
SmiMI CAYNNNNRTG 1 cut(s) 289
Sse9I AATT 2 cut(s) 166, 235
SsiI CCGC 1 cut(s) 213
StyI CCWWGG 1 cut(s) 31
TaqI TCGA 1 cut(s) 176
TasI AATT 2 cut(s) 166, 235
TfiI GAWTC 1 cut(s) 44
Tru1I TTAA 1 cut(s) 234
Tru9I TTAA 1 cut(s) 234
TspDTI ATGAA 2 cut(s) 81, 194
VneI GTGCAC 1 cut(s) 292
VpaK11BI GGWCC 2 cut(s) 61, 210
VspI ATTAAT 1 cut(s) 234
XapI RAATTY 1 cut(s) 166
XceI RCATGY 1 cut(s) 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.