MD12G1097100.v1.1
MYB Family

Alcohol dehydrogenase transcription factor Myb/SANT-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
N/A
Physical Location & Seq
Forward (+)
15272666 .. 15273542
877 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1097100.v1.1.491

Sequence Viewer

Length: 189 bp
ATGCTGTTTGCGAAAGAAGTTGTATTGGCTTGTCGCAATGGCGTGGAGGTGGCAATTGTTGGTCGCAACTTCTTTTGTGGAGATGCATGGGTGATGGTAACTGGGTTGGATAGAATCATAGAAGTACTGCATACCAGATTAGTTGAAATATACCATTTATGCTGGAGGGATGTTACAGAAATGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.14

Weight (kDa)

5.5

Isoelectric Point (pI)

24.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 126
AgsI TTSAA 1 cut(s) 146
AsuHPI GGTGA 1 cut(s) 103
BccI CCATC 1 cut(s) 88
BmcAI AGTACT 1 cut(s) 126
BmrI ACTGGG 1 cut(s) 111
BmsI GCATC 1 cut(s) 73
BmuI ACTGGG 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 184
Bse1I ACTGG 1 cut(s) 106
Bse3DI GCAATG 1 cut(s) 43
BseGI GGATG 1 cut(s) 175
BseMI GCAATG 1 cut(s) 43
BseNI ACTGG 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 43
BsrI ACTGG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 175
BtsCI GGATG 1 cut(s) 175
Csp6I GTAC 1 cut(s) 125
CviAII CATG 1 cut(s) 87
CviJI RGCY 1 cut(s) 29
CviKI_1 RGCY 1 cut(s) 29
CviQI GTAC 1 cut(s) 125
EcoT22I ATGCAT 1 cut(s) 88
FaeI CATG 1 cut(s) 90
FaiI YATR 5 cut(s) 88, 119, 132, 151, 160
FatI CATG 1 cut(s) 86
FokI GGATG 1 cut(s) 182
GsuI CTGGAG 1 cut(s) 184
Hin1II CATG 1 cut(s) 90
HinfI GANTC 1 cut(s) 114
HphI GGTGA 1 cut(s) 103
HpyCH4V TGCA 2 cut(s) 86, 130
Hsp92II CATG 1 cut(s) 90
LpnPI CCDG 3 cut(s) 87, 148, 148
LweI GCATC 1 cut(s) 73
MaeIII GTNAC 2 cut(s) 97, 172
MfeI CAATTG 1 cut(s) 54
MluCI AATT 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 87
MnlI CCTC 2 cut(s) 40, 159
Mph1103I ATGCAT 1 cut(s) 88
MunI CAATTG 1 cut(s) 54
NlaIII CATG 1 cut(s) 90
NsiI ATGCAT 1 cut(s) 88
PfeI GAWTC 1 cut(s) 114
RsaI GTAC 1 cut(s) 126
RsaNI GTAC 1 cut(s) 125
ScaI AGTACT 1 cut(s) 126
SetI ASST 1 cut(s) 51
SfaNI GCATC 1 cut(s) 73
SgeI CNNG 6 cut(s) 42, 55, 99, 114, 147, 175
Sse9I AATT 1 cut(s) 54
TasI AATT 1 cut(s) 54
TatI WGTACW 1 cut(s) 124
TfiI GAWTC 1 cut(s) 114
ZrmI AGTACT 1 cut(s) 126
Zsp2I ATGCAT 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.