Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

8601103 .. 8602725

Gene Structure 1623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1076100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 135 bp

ATGCAAGAGCAGGCGGCAAGCTCCCTCACTGTGAGCTCTCTGCCTTCCAGCAGCGAAAGGTCTTTGAGCTCTACATTCCATCTTGAAGTTAAAGAAGTTAATCAATATAAATACAACAAATATATCCTCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009719 GO:0009725 GO:0009737 GO:0009739 GO:0009740 GO:0009755 GO:0009787 GO:0009889 GO:0009893 GO:0009958 GO:0009966 GO:0009987 GO:0010017 GO:0010033 GO:0010099 GO:0010114 GO:0010218 GO:0010224 GO:0010468 GO:0010476 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0031539 GO:0032870 GO:0032991 GO:0032993 GO:0033993 GO:0042221 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048518 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0080090 GO:0080167 GO:0097159 GO:0097305 GO:0104004 GO:0140110 GO:1901363 GO:1901419 GO:1901700 GO:1901701 GO:1903506 GO:1905957 GO:1990837 GO:2000026 GO:2000030 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

Lectin_legB bZIP_1

Protein Analysis

45

Amino Acids

5.01

Weight (kDa)

8.09

Isoelectric Point (pI)

68.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	14
AgsI	TTSAA	1 cut(s)	86
AluBI	AGCT	3 cut(s)	21, 36, 69
AluI	AGCT	3 cut(s)	21, 36, 69
Alw21I	GWGCWC	2 cut(s)	38, 71
ApeKI	GCWGC	1 cut(s)	51
BanII	GRGCYC	2 cut(s)	38, 71
Bbv12I	GWGCWC	2 cut(s)	38, 71
BbvI	GCAGC	1 cut(s)	63
BccI	CCATC	1 cut(s)	87
BisI	GCNGC	2 cut(s)	15, 52
BlsI	GCNGC	2 cut(s)	16, 53
BseXI	GCAGC	1 cut(s)	63
BsiHKAI	GWGCWC	2 cut(s)	38, 71
Bsp1286I	GDGCHC	2 cut(s)	38, 71
BspACI	CCGC	1 cut(s)	14
Bst4CI	ACNGT	1 cut(s)	31
BstC8I	GCNNGC	2 cut(s)	12, 19
BstV1I	GCAGC	1 cut(s)	63
BtsIMutI	CAGTG	1 cut(s)	27
Cac8I	GCNNGC	2 cut(s)	12, 19
CviJI	RGCY	3 cut(s)	21, 36, 69
CviKI_1	RGCY	3 cut(s)	21, 36, 69
Ecl136II	GAGCTC	2 cut(s)	36, 69
Eco24I	GRGCYC	2 cut(s)	38, 71
Eco53kI	GAGCTC	2 cut(s)	36, 69
EcoICRI	GAGCTC	2 cut(s)	36, 69
EcoT38I	GRGCYC	2 cut(s)	38, 71
FaiI	YATR	2 cut(s)	108, 123
Fnu4HI	GCNGC	2 cut(s)	15, 52
FriOI	GRGCYC	2 cut(s)	38, 71
Fsp4HI	GCNGC	2 cut(s)	15, 52
FspEI	CC	6 cut(s)	37, 38, 43, 57, 61, 92
GluI	GCNGC	2 cut(s)	15, 52
Hpy188III	TCNNGA	1 cut(s)	83
HpyAV	CCTTC	1 cut(s)	54
HpyCH4III	ACNGT	1 cut(s)	31
HpyCH4V	TGCA	1 cut(s)	4
LmnI	GCTCC	1 cut(s)	26
LpnPI	CCDG	1 cut(s)	61
Lsp1109I	GCAGC	1 cut(s)	63
MhlI	GDGCHC	2 cut(s)	38, 71
MnlI	CCTC	1 cut(s)	35
MseI	TTAA	2 cut(s)	90, 99
PkrI	GCNGC	2 cut(s)	16, 53
Psp124BI	GAGCTC	2 cut(s)	38, 71
SacI	GAGCTC	2 cut(s)	38, 71
SaqAI	TTAA	2 cut(s)	90, 99
SatI	GCNGC	2 cut(s)	15, 52
SduI	GDGCHC	2 cut(s)	38, 71
SetI	ASST	4 cut(s)	23, 38, 62, 71
SgeI	CNNG	5 cut(s)	17, 23, 30, 60, 95
SsiI	CCGC	1 cut(s)	14
SstI	GAGCTC	2 cut(s)	38, 71
TaaI	ACNGT	1 cut(s)	31
TauI	GCSGC	1 cut(s)	17
Tru1I	TTAA	2 cut(s)	90, 99
Tru9I	TTAA	2 cut(s)	90, 99
TscAI	CASTG	1 cut(s)	34
TseI	GCWGC	1 cut(s)	51
TspRI	CASTG	1 cut(s)	34

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.