Prupe.1G007300_v2.0.a1

prostaglandin-E synthase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
634957 .. 636651
1695 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G007300.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 435 bp
ATGATGAGGGAAGAAGTGCAACTAGCACAAGAAGAAAAGAATTCAAAAGAATGCATGAAGTGCCTCACCCATGCCAAAAGAAGAAAGGAAAAGAAGTATGGGATGGAAAGAAAACAAGAAGAAATTGAATTCACATGCTTTGTGTGTGCATCACTGCTATACGACACCTTCGCTTGGGTTTTGCAAAGTGGTACAAATCAGAGTTTGTATGTGAGGATAATCAAAAAGTATACTGGAGGTGCATCTATGTATTTTGATTCAAAGAAACTCAAGGAGAAGCACAATATCGGCGACGAGCGTGCAGCCTTGTATGAAGCTGCTGAAACATGGGTGGATGCTCTAAACGACGGGCCATTTCTTGGTGGCTCAAACTCTAATTTAGCTGATATGGCGTTTTGTGCACCATTGAGGGCCTTATATCTGGCAAAGACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0001516 GO:0001676 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005829 GO:0006082 GO:0006355 GO:0006629 GO:0006631 GO:0006633 GO:0006636 GO:0006690 GO:0006692 GO:0006693 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0016053 GO:0016192 GO:0016829 GO:0016853 GO:0016860 GO:0019219 GO:0019222 GO:0019369 GO:0019371 GO:0019752 GO:0020037 GO:0030141 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032787 GO:0032940 GO:0033218 GO:0033559 GO:0034774 GO:0035578 GO:0036230 GO:0042119 GO:0042277 GO:0042582 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043295 GO:0043299 GO:0043312 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0045893 GO:0045935 GO:0046394 GO:0046456 GO:0046457 GO:0046903 GO:0046906 GO:0048037 GO:0048518 GO:0048522 GO:0050220 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051252 GO:0051254 GO:0060205 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0072330 GO:0072341 GO:0080090 GO:0097159 GO:0097708 GO:0099503 GO:1900750 GO:1901363 GO:1901568 GO:1901570 GO:1901576 GO:1901681 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
Pfam Domains
Protein Families

Protein Analysis

145

Amino Acids

16.49

Weight (kDa)

8.22

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 359
AccI GTMKAC 1 cut(s) 230
AcsI RAATTY 2 cut(s) 40, 128
AfaI GTAC 1 cut(s) 193
AfiI CCNNNNNNNGG 2 cut(s) 174, 359
AgsI TTSAA 3 cut(s) 45, 128, 261
AjiI CACGTC 1 cut(s) 432
AluBI AGCT 2 cut(s) 317, 383
AluI AGCT 2 cut(s) 317, 383
Alw21I GWGCWC 1 cut(s) 403
Alw44I GTGCAC 1 cut(s) 399
AoxI GGCC 2 cut(s) 350, 411
ApaLI GTGCAC 1 cut(s) 399
ApeKI GCWGC 2 cut(s) 302, 317
ApoI RAATTY 2 cut(s) 40, 128
AspS9I GGNCC 2 cut(s) 350, 411
AsuHPI GGTGA 1 cut(s) 58
BaeGI GKGCMC 1 cut(s) 403
Bbv12I GWGCWC 1 cut(s) 403
BbvI GCAGC 2 cut(s) 304, 314
BccI CCATC 1 cut(s) 97
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BfaI CTAG 1 cut(s) 23
BisI GCNGC 2 cut(s) 303, 318
BlsI GCNGC 2 cut(s) 304, 319
BmgBI CACGTC 1 cut(s) 432
BmgT120I GGNCC 2 cut(s) 350, 411
BmsI GCATC 3 cut(s) 158, 251, 325
BpmI CTGGAG 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 254
Bsc4I CCNNNNNNNGG 2 cut(s) 174, 359
Bse1I ACTGG 1 cut(s) 238
BseGI GGATG 2 cut(s) 108, 340
BseLI CCNNNNNNNGG 2 cut(s) 174, 359
BseNI ACTGG 1 cut(s) 238
BseSI GKGCMC 1 cut(s) 403
BseXI GCAGC 2 cut(s) 304, 314
BsgI GTGCAG 1 cut(s) 321
BshFI GGCC 2 cut(s) 352, 413
BsiHKAI GWGCWC 1 cut(s) 403
BslI CCNNNNNNNGG 2 cut(s) 174, 359
BsmI GAATGC 1 cut(s) 56
BsnI GGCC 2 cut(s) 352, 413
Bsp1286I GDGCHC 1 cut(s) 403
BspANI GGCC 2 cut(s) 352, 413
BsrI ACTGG 1 cut(s) 238
BssNAI GTATAC 1 cut(s) 231
Bst1107I GTATAC 1 cut(s) 231
BstAPI GCANNNNNTGC 1 cut(s) 60
BstC8I GCNNGC 1 cut(s) 300
BstF5I GGATG 2 cut(s) 108, 340
BstMWI GCNNNNNNNGC 3 cut(s) 60, 389, 398
BstNSI RCATGY 1 cut(s) 138
BstSLI GKGCMC 1 cut(s) 403
BstV1I GCAGC 2 cut(s) 304, 314
BstZ17I GTATAC 1 cut(s) 231
BsuRI GGCC 2 cut(s) 352, 413
BtrI CACGTC 1 cut(s) 432
BtsCI GGATG 2 cut(s) 108, 340
BtsI GCAGTG 1 cut(s) 152
BtsIMutI CAGTG 1 cut(s) 152
Cac8I GCNNGC 1 cut(s) 300
Cfr13I GGNCC 2 cut(s) 350, 411
Csp6I GTAC 1 cut(s) 192
CviAII CATG 4 cut(s) 55, 71, 135, 327
CviJI RGCY 6 cut(s) 305, 317, 352, 366, 383, 413
CviKI_1 RGCY 6 cut(s) 305, 317, 352, 366, 383, 413
CviQI GTAC 1 cut(s) 192
EcoO109I RGGNCCY 1 cut(s) 411
EcoRI GAATTC 2 cut(s) 40, 128
EcoT22I ATGCAT 1 cut(s) 56
FaeI CATG 4 cut(s) 58, 74, 138, 330
FatI CATG 4 cut(s) 54, 70, 134, 326
FblI GTMKAC 1 cut(s) 230
Fnu4HI GCNGC 2 cut(s) 303, 318
FokI GGATG 2 cut(s) 115, 347
Fsp4HI GCNGC 2 cut(s) 303, 318
FspBI CTAG 1 cut(s) 23
GluI GCNGC 2 cut(s) 303, 318
GsuI CTGGAG 1 cut(s) 255
HaeIII GGCC 2 cut(s) 352, 413
Hin1II CATG 4 cut(s) 58, 74, 138, 330
HinfI GANTC 1 cut(s) 257
HphI GGTGA 1 cut(s) 58
Hpy166II GTNNAC 2 cut(s) 231, 401
Hpy188I TCNGA 1 cut(s) 201
Hpy8I GTNNAC 2 cut(s) 231, 401
Hpy99I CGWCG 2 cut(s) 296, 350
HpyAV CCTTC 1 cut(s) 178
HpyCH4IV ACGT 1 cut(s) 431
HpyCH4V TGCA 7 cut(s) 19, 54, 149, 184, 242, 302, 401
HpyF10VI GCNNNNNNNGC 3 cut(s) 60, 389, 398
HpySE526I ACGT 1 cut(s) 431
Hsp92II CATG 4 cut(s) 58, 74, 138, 330
LpnPI CCDG 2 cut(s) 219, 407
Lsp1109I GCAGC 2 cut(s) 304, 314
LweI GCATC 3 cut(s) 158, 251, 325
MaeI CTAG 1 cut(s) 23
MaeII ACGT 1 cut(s) 431
MboII GAAGA 4 cut(s) 23, 44, 93, 131
MhlI GDGCHC 1 cut(s) 403
MluCI AATT 4 cut(s) 40, 123, 128, 376
MnlI CCTC 4 cut(s) 74, 207, 230, 402
Mph1103I ATGCAT 1 cut(s) 56
Mva1269I GAATGC 1 cut(s) 56
MwoI GCNNNNNNNGC 3 cut(s) 60, 389, 398
NlaIII CATG 4 cut(s) 58, 74, 138, 330
NsiI ATGCAT 1 cut(s) 56
NspI RCATGY 1 cut(s) 138
PctI GAATGC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 257
PflMI CCANNNNNTGG 1 cut(s) 359
PkrI GCNGC 2 cut(s) 304, 319
PspPI GGNCC 2 cut(s) 350, 411
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
SatI GCNGC 2 cut(s) 303, 318
Sau96I GGNCC 2 cut(s) 350, 411
SduI GDGCHC 1 cut(s) 403
SetI ASST 5 cut(s) 170, 241, 319, 385, 434
SfaNI GCATC 3 cut(s) 158, 251, 325
SmlI CTYRAG 1 cut(s) 269
SmoI CTYRAG 1 cut(s) 269
Sse9I AATT 4 cut(s) 40, 123, 128, 376
SspMI CTAG 1 cut(s) 23
TaiI ACGT 1 cut(s) 434
TasI AATT 4 cut(s) 40, 123, 128, 376
TfiI GAWTC 1 cut(s) 257
TscAI CASTG 1 cut(s) 159
TseI GCWGC 2 cut(s) 302, 317
TspDTI ATGAA 2 cut(s) 71, 327
TspRI CASTG 1 cut(s) 159
Van91I CCANNNNNTGG 1 cut(s) 359
VneI GTGCAC 1 cut(s) 399
XapI RAATTY 2 cut(s) 40, 128
XceI RCATGY 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 230
XspI CTAG 1 cut(s) 23
Zsp2I ATGCAT 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.