Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0029147

Physical Location & Seq

Genomic Coordinates Reverse (-)

759935 .. 761997

Gene Structure 2063 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G009700.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 291 bp

ATGGTCCGAGATGGCTTTTTCGGCTTTAAAGACCATTTTCAATCTCTATGTGATACTGCGGACGGTGGTAAAGACTTCTATTTGCTTGGTTCTGATTTTGAGAGCTATTTAGAGGCTCAGTTAATTATTTCTGCTGCTGCTGATAAAGCATTTGCGGATCCAAATAAGTGGACTCAGATGAGCATCCTTAGCACAGCCGGGTCGGGGAGATTTAGCAGTGACAGAACAATCCGAGACTACGTGGAGAAGACTTGGGGAATTGAACCATGCAGATTCCCTTCTGATGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004645 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005977 GO:0005980 GO:0006073 GO:0006091 GO:0006112 GO:0008144 GO:0008150 GO:0008152 GO:0008184 GO:0009056 GO:0009057 GO:0009251 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0014074 GO:0015980 GO:0016052 GO:0016740 GO:0016757 GO:0016758 GO:0019842 GO:0030170 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043170 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044424 GO:0044464 GO:0046683 GO:0048037 GO:0050662 GO:0050896 GO:0051591 GO:0055114 GO:0070279 GO:0071704 GO:0097159 GO:1901363 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 ko02026 ko04217 ko04910 ko04922 ko04931 map00500 map01100 map01110 map02026 map04217 map04910 map04922 map04931

Pfam Domains

Protein Families

Phosphorylase

Protein Analysis

97

Amino Acids

10.71

Weight (kDa)

4.62

Isoelectric Point (pI)

27.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0029147)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G009700_v2.0.a1 Prupe.1G009700_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	59, 155
AclWI	GGATC	2 cut(s)	152, 165
AfiI	CCNNNNNNNGG	2 cut(s)	204, 284
AgsI	TTSAA	2 cut(s)	41, 263
AluBI	AGCT	1 cut(s)	105
AluI	AGCT	1 cut(s)	105
Alw26I	GTCTC	1 cut(s)	228
AlwI	GGATC	2 cut(s)	152, 165
ApeKI	GCWGC	2 cut(s)	134, 137
AspS9I	GGNCC	1 cut(s)	4
AsuC2I	CCSGG	1 cut(s)	199
AvaII	GGWCC	1 cut(s)	4
BamHI	GGATCC	1 cut(s)	157
BbsI	GAAGAC	1 cut(s)	254
BbvI	GCAGC	2 cut(s)	121, 124
BccI	CCATC	2 cut(s)	5, 278
BcnI	CCSGG	1 cut(s)	199
BcoDI	GTCTC	1 cut(s)	228
BfaI	CTAG	1 cut(s)	289
BisI	GCNGC	2 cut(s)	135, 138
BlsI	GCNGC	2 cut(s)	136, 139
Bme1390I	CCNGG	1 cut(s)	199
Bme18I	GGWCC	1 cut(s)	4
BmgT120I	GGNCC	1 cut(s)	4
BmiI	GGNNCC	1 cut(s)	159
BmrFI	CCNGG	1 cut(s)	199
BmsI	GCATC	1 cut(s)	192
BpiI	GAAGAC	1 cut(s)	254
Bpu10I	CCTNAGC	1 cut(s)	188
BpuMI	CCSGG	1 cut(s)	199
BsaAI	YACGTR	1 cut(s)	241
BsaBI	GATNNNNATC	1 cut(s)	182
Bsc4I	CCNNNNNNNGG	2 cut(s)	204, 284
Bse8I	GATNNNNATC	1 cut(s)	182
BseGI	GGATG	1 cut(s)	183
BseJI	GATNNNNATC	1 cut(s)	182
BseLI	CCNNNNNNNGG	2 cut(s)	204, 284
BseMII	CTCAG	2 cut(s)	131, 188
BseXI	GCAGC	2 cut(s)	121, 124
BsiSI	CCGG	1 cut(s)	198
BslI	CCNNNNNNNGG	2 cut(s)	204, 284
BsmAI	GTCTC	1 cut(s)	228
Bsp143I	GATC	1 cut(s)	157
BspACI	CCGC	2 cut(s)	59, 155
BspCNI	CTCAG	2 cut(s)	130, 187
BspLI	GGNNCC	1 cut(s)	159
BspPI	GGATC	2 cut(s)	152, 165
BssMI	GATC	1 cut(s)	157
Bst4CI	ACNGT	1 cut(s)	65
BstBAI	YACGTR	1 cut(s)	241
BstDEI	CTNAG	3 cut(s)	117, 174, 188
BstF5I	GGATG	1 cut(s)	183
BstKTI	GATC	1 cut(s)	160
BstMAI	GTCTC	1 cut(s)	228
BstMBI	GATC	1 cut(s)	157
BstMWI	GCNNNNNNNGC	3 cut(s)	21, 146, 189
BstSCI	CCNGG	1 cut(s)	197
BstV1I	GCAGC	2 cut(s)	121, 124
BstV2I	GAAGAC	1 cut(s)	254
BstX2I	RGATCY	1 cut(s)	157
BstXI	CCANNNNNNTGG	1 cut(s)	168
BstYI	RGATCY	1 cut(s)	157
BtsCI	GGATG	1 cut(s)	183
BtsI	GCAGTG	1 cut(s)	223
BtsIMutI	CAGTG	1 cut(s)	223
Cfr13I	GGNCC	1 cut(s)	4
CviAII	CATG	1 cut(s)	267
CviJI	RGCY	6 cut(s)	15, 24, 105, 116, 197, 288
CviKI_1	RGCY	6 cut(s)	15, 24, 105, 116, 197, 288
DdeI	CTNAG	3 cut(s)	117, 174, 188
DpnI	GATC	1 cut(s)	159
DpnII	GATC	1 cut(s)	157
DraI	TTTAAA	1 cut(s)	28
Eco47I	GGWCC	1 cut(s)	4
FaeI	CATG	1 cut(s)	270
FaiI	YATR	2 cut(s)	49, 268
FatI	CATG	1 cut(s)	266
Fnu4HI	GCNGC	2 cut(s)	135, 138
FokI	GGATG	1 cut(s)	170
Fsp4HI	GCNGC	2 cut(s)	135, 138
FspBI	CTAG	1 cut(s)	289
GluI	GCNGC	2 cut(s)	135, 138
HapII	CCGG	1 cut(s)	198
Hin1II	CATG	1 cut(s)	270
HinfI	GANTC	2 cut(s)	172, 273
HpaII	CCGG	1 cut(s)	198
Hpy166II	GTNNAC	1 cut(s)	171
Hpy188I	TCNGA	5 cut(s)	8, 94, 177, 233, 283
Hpy8I	GTNNAC	1 cut(s)	171
HpyAV	CCTTC	1 cut(s)	288
HpyCH4III	ACNGT	1 cut(s)	65
HpyCH4IV	ACGT	1 cut(s)	240
HpyCH4V	TGCA	1 cut(s)	270
HpyF10VI	GCNNNNNNNGC	3 cut(s)	21, 146, 189
HpyF3I	CTNAG	3 cut(s)	117, 174, 188
HpySE526I	ACGT	1 cut(s)	240
Hsp92II	CATG	1 cut(s)	270
Kzo9I	GATC	1 cut(s)	157
LpnPI	CCDG	1 cut(s)	211
Lsp1109I	GCAGC	2 cut(s)	121, 124
LweI	GCATC	1 cut(s)	192
MaeI	CTAG	1 cut(s)	289
MaeII	ACGT	1 cut(s)	240
MaeIII	GTNAC	1 cut(s)	218
MalI	GATC	1 cut(s)	159
MboI	GATC	1 cut(s)	157
MboII	GAAGA	1 cut(s)	259
MflI	RGATCY	1 cut(s)	157
MluCI	AATT	2 cut(s)	123, 258
MlyI	GAGTC	1 cut(s)	166
MnlI	CCTC	1 cut(s)	106
MseI	TTAA	2 cut(s)	27, 122
MspI	CCGG	1 cut(s)	198
MspR9I	CCNGG	1 cut(s)	199
MwoI	GCNNNNNNNGC	3 cut(s)	21, 146, 189
NciI	CCSGG	1 cut(s)	199
NdeII	GATC	1 cut(s)	157
NlaIII	CATG	1 cut(s)	270
NlaIV	GGNNCC	1 cut(s)	159
NmuCI	GTSAC	1 cut(s)	218
PfeI	GAWTC	1 cut(s)	273
PkrI	GCNGC	2 cut(s)	136, 139
PleI	GAGTC	1 cut(s)	166
PpsI	GAGTC	1 cut(s)	166
Ppu21I	YACGTR	1 cut(s)	241
PspN4I	GGNNCC	1 cut(s)	159
PspPI	GGNCC	1 cut(s)	4
PsuI	RGATCY	1 cut(s)	157
SaqAI	TTAA	2 cut(s)	27, 122
SatI	GCNGC	2 cut(s)	135, 138
Sau3AI	GATC	1 cut(s)	157
Sau96I	GGNCC	1 cut(s)	4
SchI	GAGTC	1 cut(s)	166
ScrFI	CCNGG	1 cut(s)	199
SetI	ASST	2 cut(s)	107, 243
SfaNI	GCATC	1 cut(s)	192
SgeI	CNNG	9 cut(s)	20, 98, 210, 211, 216, 245, 253, 264, 279
SinI	GGWCC	1 cut(s)	4
Sse9I	AATT	2 cut(s)	123, 258
SsiI	CCGC	2 cut(s)	59, 155
SspMI	CTAG	1 cut(s)	289
StyD4I	CCNGG	1 cut(s)	197
TaaI	ACNGT	1 cut(s)	65
TaiI	ACGT	1 cut(s)	243
TasI	AATT	2 cut(s)	123, 258
TfiI	GAWTC	1 cut(s)	273
Tru1I	TTAA	2 cut(s)	27, 122
Tru9I	TTAA	2 cut(s)	27, 122
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	1 cut(s)	218
TseI	GCWGC	2 cut(s)	134, 137
Tsp45I	GTSAC	1 cut(s)	218
TspRI	CASTG	1 cut(s)	223
VpaK11BI	GGWCC	1 cut(s)	4
XspI	CTAG	1 cut(s)	289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.