Prupe.1G009900_v2.0.a1

Transcription initiation factor TFIID subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
771385 .. 774542
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G009900.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 2142 bp
ATGGGTTACGATTCGTGTGATGAGGAAGTTTACGAGGAGTTTGGTAGGGGTAATCGATTTCTGGGGTTCATGTTTGGCAATGTCAATGAATCTGGTGATCTTGACGTCGATTATCTTGACGACGATGCAAAGGAACATCTTGCTGCGTTTTCTGACAAGCTCGGCCCATCTTTGATAAAACTAGATCATACGGATGTTGAACAAGAATATGATGGTAACAAGGCTGACAATGCAGTTGATTATTTTGATTTTGATGAGGATTTTAAGGAGGAGGACCATGACCCCTTGTTGCCCAGAAACGAATATGATCTTTATGTTGATCAAGTCCCATTGGCTTCTTTGGTGCCCACTACCACCACGGGTTCTGTGTTTGATGATGAAAATTATGATGAGGAGGAAATTGAAGAGCAAGTGGAACATGATCATGTGGTTGCAACTGAAAACAAAGTTGATGTTGATGTTGATGTTCAAACTATTTATTTACCAGCTGAGGAGGGTCAAGTGTTTTCGGATAAAAGTTGCACTTTAACTCCCACTCCACTGCCAGTTCTATGCATAGAAGATGGATTGGCTATCTTACGATTTTCGGAAATCTTTGGTGCAGATCATGATAGGCTTAGCTACTCCGCTCCTAAACATAGGCATACGAAATCCATGGATGTTTCTGATGATATTGTTGAAGACGACGAAGAAGAGGCATTCTTGCCAGGATTTCAGTCTTTGACAGTGAAACATGGCATCTCAGTGTCCTCATTCAAGGATGATGATTCGAACTTCACAAAATTAAAAGACTCGTGTTTTGTTGCTGAACCAATGAAACAGGATCTAACAGTACATGTTTCTGAGGAAAGGGAAAGGCAATCACCTTTGGTTTCTAAATTTTTCCCTCTTGATCAACAAGACTGGGCAGATGGAATTGTTTGGGGCAATTCTCCTATAGCAAGCGACAGTGACGTTGAGAGTTGTGAAATATCAGGACCTGATCATGAAGCCTCAGTTAAAAATGACACAGAACCTGATAATGGGCCACAAAATATGCTGCATAATAGCTCATCTAGTAATTCATCACTTACTTTCTCAGCAAGCAGATGCCATCCCCAAATTTTGAGCCTAGACGTGGATGTCAGTGCAGACGGTACAAGGCAGAATGCTGGTGAGAAGCTTCAACAGAGTGATGGTGCGAGGCAATTAATTCGCAAACTTGCTTCACAAAACCGGGACATGCTGGAAGGATCTTGGTTAGACCAAATAATATGGGACCCTGATAGTGATACACCTACTGAGAAGCCAAAGCTTGTCATAGATCTTCAAGATGAGCAAATGCTTTTTGAGGTTTTGGATAACAAGGACAGTGAACATCAAAGGCTTCATTCAATGGCCATGATGGTATCTCGCCCTCTAAAGCCGAGCAATGGAGATTCTTTTGAGCTGATAGATAATGAAGGTCAATTTGGTTGGCAAGATGTTGCAAGTGATAGATATTATTCAAAGAGCAAGAGGCATAAACACACAGCGAGAGGCATAAAGGTTTATCAATCCCAACCTGCACTGGGGAAGAAAAAGTCTGCTGCTTGTCGAGGACGCACCACTGTTACTGGAGCAGATCATACTGATCCGCGCAGACTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAGATTCGGTGTTTCTGATGAACTGATTGCGAGGCAGACTAGATGGCATCGGATTGCAATGATAAGCAAGCTTTCCAGTGAGCAAGCTGCATCTGGGGTCAAAGTTCAGAGTTTTTCTTCAGCCATAGGTGGGGATGAAAATGAGAATGGCTGTGAAGGAAATAATGGCGATCTAGGTTCTTTTGCAGGCTATTTGGAAAGTCTGCTTGATGCAGAAGAATGTGATCAAGAAGGTCTAGGCCTGGGAGATGACCATGAATCCAAGCATGATAAACCGGATGGTGTCAAAGGGCTTAAAAAGAGAAGCCAGCTATCCATCCCTCTGACAGAAGAGGAAATTGAAGATGAAGCAACTGAACAAAGCAGGCTGCTCATGGATGATGATAAGACTGCGAGGAAGAAGAAGAAAGTAAGATTTGTGGAGGAAGCAGGGTTGGCTCCCGGCTCGCAAACATGTTTTGGTATCGAAATCCAGAGAGGCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0000988 GO:0000989 GO:0001076 GO:0001129 GO:0001132 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008080 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0016740 GO:0016746 GO:0016747 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034212 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043565 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0055029 GO:0060255 GO:0061695 GO:0061733 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling

Protein Analysis

714

Amino Acids

79.58

Weight (kDa)

4.48

Isoelectric Point (pI)

47.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1121
AatII GACGTC 1 cut(s) 108
Acc36I ACCTGC 1 cut(s) 1552
AccB1I GGYRCC 1 cut(s) 343
AccBSI CCGCTC 1 cut(s) 629
AccII CGCG 1 cut(s) 1618
AciI CCGC 2 cut(s) 627, 1616
AclWI GGATC 3 cut(s) 831, 1240, 1607
AcoI YGGCCR 1 cut(s) 1377
AcsI RAATTY 2 cut(s) 878, 1101
AcuI CTGAAG 1 cut(s) 1758
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 2 cut(s) 834, 1138
AfiI CCNNNNNNNGG 5 cut(s) 1022, 1117, 1412, 1550, 1785
AflIII ACRYGT 2 cut(s) 835, 2108
AjiI CACGTC 1 cut(s) 1117
AjnI CCWGG 2 cut(s) 706, 1896
AjuI GAANNNNNNNTTGG 2 cut(s) 1434, 1466
AlwI GGATC 3 cut(s) 831, 1240, 1607
AlwNI CAGNNNCTG 2 cut(s) 980, 1016
AoxI GGCC 5 cut(s) 163, 1025, 1377, 1894, 2134
ApeKI GCWGC 6 cut(s) 143, 1039, 1568, 1637, 1742, 2023
ApoI RAATTY 2 cut(s) 878, 1101
ArsI GACNNNNNNTTYG 2 cut(s) 782, 814
AseI ATTAAT 1 cut(s) 1190
AspLEI GCGC 1 cut(s) 1620
AspS9I GGNCC 5 cut(s) 164, 274, 977, 1025, 1258
AsuC2I CCSGG 2 cut(s) 1217, 2097
AsuHPI GGTGA 3 cut(s) 107, 855, 1166
AsuII TTCGAA 1 cut(s) 770
AvaII GGWCC 3 cut(s) 274, 977, 1258
BaeGI GKGCMC 1 cut(s) 348
BalI TGGCCA 1 cut(s) 1379
BanI GGYRCC 1 cut(s) 343
BauI CACGAG 2 cut(s) 793, 1641
BbsI GAAGAC 1 cut(s) 687
BbvCI CCTCAGC 1 cut(s) 489
BbvI GCAGC 6 cut(s) 130, 1026, 1555, 1624, 1729, 2010
BcgI CGANNNNNNTGC 2 cut(s) 1175, 1209
BciT130I CCWGG 2 cut(s) 708, 1898
BclI TGATCA 5 cut(s) 319, 421, 892, 982, 1879
BcnI CCSGG 2 cut(s) 1217, 2097
BfaI CTAG 6 cut(s) 182, 1056, 1112, 1695, 1829, 1892
BfmI CTRYAG 1 cut(s) 936
BfuAI ACCTGC 1 cut(s) 1552
BglII AGATCT 1 cut(s) 1303
BisI GCNGC 6 cut(s) 144, 1040, 1569, 1638, 1743, 2024
BlpI GCTNAGC 1 cut(s) 617
BlsI GCNGC 6 cut(s) 145, 1041, 1570, 1639, 1744, 2025
Bme1390I CCNGG 4 cut(s) 708, 1217, 1898, 2097
Bme18I GGWCC 3 cut(s) 274, 977, 1258
BmgBI CACGTC 1 cut(s) 1117
BmgT120I GGNCC 5 cut(s) 164, 274, 977, 1025, 1258
BmiI GGNNCC 4 cut(s) 345, 1259, 1260, 2094
BmrFI CCNGG 4 cut(s) 708, 1217, 1898, 2097
BmrI ACTGGG 2 cut(s) 913, 1559
BmsI GCATC 6 cut(s) 115, 747, 1079, 1711, 1754, 1855
BmuI ACTGGG 2 cut(s) 913, 1559
BpiI GAAGAC 1 cut(s) 687
BpmI CTGGAG 1 cut(s) 1617
Bpu10I CCTNAGC 1 cut(s) 489
Bpu1102I GCTNAGC 1 cut(s) 617
Bpu14I TTCGAA 1 cut(s) 770
BpuMI CCSGG 2 cut(s) 1217, 2097
Bsa29I ATCGAT 1 cut(s) 55
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 3 cut(s) 357, 654, 1897
BsaWI WCCGGW 1 cut(s) 1930
BsaXI ACNNNNNCTCC 4 cut(s) 514, 520, 544, 550
Bsc4I CCNNNNNNNGG 5 cut(s) 1022, 1117, 1412, 1550, 1785
Bse1I ACTGG 6 cut(s) 545, 908, 1554, 1600, 1731, 2137
Bse3DI GCAATG 3 cut(s) 85, 1417, 1719
BseBI CCWGG 2 cut(s) 708, 1898
BseCI ATCGAT 1 cut(s) 55
BseDI CCNNGG 3 cut(s) 357, 654, 1897
BseGI GGATG 9 cut(s) 199, 664, 766, 1093, 1126, 1795, 1939, 1971, 2038
BseLI CCNNNNNNNGG 5 cut(s) 1022, 1117, 1412, 1550, 1785
BseMI GCAATG 3 cut(s) 85, 1417, 1719
BseMII CTCAG 6 cut(s) 480, 756, 834, 1008, 1092, 1272
BseNI ACTGG 6 cut(s) 545, 908, 1554, 1600, 1731, 2137
BseRI GAGGAG 4 cut(s) 50, 284, 407, 506
BseSI GKGCMC 1 cut(s) 348
BseXI GCAGC 6 cut(s) 130, 1026, 1555, 1624, 1729, 2010
BsgI GTGCAG 4 cut(s) 621, 1149, 1530, 1623
Bsh1236I CGCG 1 cut(s) 1618
BshFI GGCC 5 cut(s) 165, 1027, 1379, 1896, 2136
BshNI GGYRCC 1 cut(s) 343
BshVI ATCGAT 1 cut(s) 55
BsiSI CCGG 3 cut(s) 1216, 1931, 2097
BslFI GGGAC 3 cut(s) 311, 1232, 1271
BslI CCNNNNNNNGG 5 cut(s) 1022, 1117, 1412, 1550, 1785
BsmFI GGGAC 3 cut(s) 311, 1232, 1271
BsmI GAATGC 2 cut(s) 698, 1153
BsnI GGCC 5 cut(s) 165, 1027, 1379, 1896, 2136
Bsp119I TTCGAA 1 cut(s) 770
Bsp1286I GDGCHC 1 cut(s) 348
Bsp1720I GCTNAGC 1 cut(s) 617
Bsp19I CCATGG 1 cut(s) 654
BspACI CCGC 2 cut(s) 627, 1616
BspANI GGCC 5 cut(s) 165, 1027, 1379, 1896, 2136
BspCNI CTCAG 6 cut(s) 481, 755, 835, 1007, 1091, 1273
BspDI ATCGAT 1 cut(s) 55
BspFNI CGCG 1 cut(s) 1618
BspHI TCATGA 2 cut(s) 607, 985
BspLI GGNNCC 4 cut(s) 345, 1259, 1260, 2094
BspMI ACCTGC 1 cut(s) 1552
BspPI GGATC 3 cut(s) 831, 1240, 1607
BspQI GCTCTTC 1 cut(s) 399
BspT104I TTCGAA 1 cut(s) 770
BspT107I GGYRCC 1 cut(s) 343
BsrBI CCGCTC 1 cut(s) 629
BsrDI GCAATG 3 cut(s) 85, 1417, 1719
BsrI ACTGG 6 cut(s) 545, 908, 1554, 1600, 1731, 2137
BssECI CCNNGG 3 cut(s) 357, 654, 1897
BssNI GRCGYC 1 cut(s) 105
BssSI CACGAG 2 cut(s) 793, 1641
BssT1I CCWWGG 1 cut(s) 654
Bst2BI CACGAG 2 cut(s) 793, 1641
Bst2UI CCWGG 2 cut(s) 708, 1898
Bst4CI ACNGT 6 cut(s) 727, 832, 950, 1136, 1352, 1591
Bst6I CTCTTC 3 cut(s) 399, 687, 1980
BstACI GRCGYC 1 cut(s) 105
BstBI TTCGAA 1 cut(s) 770
BstC8I GCNNGC 8 cut(s) 943, 1084, 1724, 1740, 1843, 1964, 2021, 2102
BstDEI CTNAG 9 cut(s) 489, 617, 742, 843, 994, 1078, 1281, 1625, 1655
BstDSI CCRYGG 2 cut(s) 357, 654
BstF5I GGATG 9 cut(s) 199, 664, 766, 1093, 1126, 1795, 1939, 1971, 2038
BstFNI CGCG 1 cut(s) 1618
BstHHI GCGC 1 cut(s) 1620
BstMWI GCNNNNNNNGC 3 cut(s) 230, 1626, 2090
BstNI CCWGG 2 cut(s) 708, 1898
BstNSI RCATGY 3 cut(s) 839, 1225, 2112
BstSCI CCNGG 4 cut(s) 706, 1215, 1896, 2095
BstSFI CTRYAG 1 cut(s) 936
BstSLI GKGCMC 1 cut(s) 348
BstUI CGCG 1 cut(s) 1618
BstV1I GCAGC 6 cut(s) 130, 1026, 1555, 1624, 1729, 2010
BstV2I GAAGAC 1 cut(s) 687
BstX2I RGATCY 3 cut(s) 823, 1232, 1303
BstYI RGATCY 3 cut(s) 823, 1232, 1303
Bsu15I ATCGAT 1 cut(s) 55
BsuRI GGCC 5 cut(s) 165, 1027, 1379, 1896, 2136
BsuTUI ATCGAT 1 cut(s) 55
BtgI CCRYGG 2 cut(s) 357, 654
BtrI CACGTC 1 cut(s) 1117
BtsCI GGATG 9 cut(s) 199, 664, 766, 1093, 1126, 1795, 1939, 1971, 2038
BtsI GCAGTG 1 cut(s) 539
BtsIMutI CAGTG 9 cut(s) 539, 732, 750, 955, 1132, 1357, 1547, 1587, 1738
BveI ACCTGC 1 cut(s) 1552
Cac8I GCNNGC 8 cut(s) 943, 1084, 1724, 1740, 1843, 1964, 2021, 2102
CaiI CAGNNNCTG 2 cut(s) 980, 1016
CciI TCATGA 2 cut(s) 607, 985
CfoI GCGC 1 cut(s) 1620
Cfr13I GGNCC 5 cut(s) 164, 274, 977, 1025, 1258
ClaI ATCGAT 1 cut(s) 55
CseI GACGC 1 cut(s) 1590
Csp6I GTAC 2 cut(s) 833, 1137
CviQI GTAC 2 cut(s) 833, 1137
DdeI CTNAG 9 cut(s) 489, 617, 742, 843, 994, 1078, 1281, 1625, 1655
DrdI GACNNNNNNGTC 1 cut(s) 1121
DseDI GACNNNNNNGTC 1 cut(s) 1121
EaeI YGGCCR 1 cut(s) 1377
Eam1104I CTCTTC 3 cut(s) 399, 687, 1980
EarI CTCTTC 3 cut(s) 399, 687, 1980
Eco130I CCWWGG 1 cut(s) 654
Eco147I AGGCCT 1 cut(s) 1896
Eco47I GGWCC 3 cut(s) 274, 977, 1258
Eco57I CTGAAG 1 cut(s) 1758
EcoO109I RGGNCCY 2 cut(s) 977, 1258
EcoRII CCWGG 2 cut(s) 706, 1896
EcoT14I CCWWGG 1 cut(s) 654
EcoT22I ATGCAT 1 cut(s) 557
ErhI CCWWGG 1 cut(s) 654
FalI AAGNNNNNCTT 2 cut(s) 508, 540
FaqI GGGAC 3 cut(s) 311, 1232, 1271
FbaI TGATCA 5 cut(s) 319, 421, 892, 982, 1879
Fnu4HI GCNGC 6 cut(s) 144, 1040, 1569, 1638, 1743, 2024
FokI GGATG 9 cut(s) 206, 671, 773, 1080, 1133, 1802, 1946, 1958, 2045
Fsp4HI GCNGC 6 cut(s) 144, 1040, 1569, 1638, 1743, 2024
FspBI CTAG 6 cut(s) 182, 1056, 1112, 1695, 1829, 1892
GlaI GCGC 1 cut(s) 1619
GluI GCNGC 6 cut(s) 144, 1040, 1569, 1638, 1743, 2024
GsuI CTGGAG 1 cut(s) 1617
HaeIII GGCC 5 cut(s) 165, 1027, 1379, 1896, 2136
HapII CCGG 3 cut(s) 1216, 1931, 2097
HgaI GACGC 1 cut(s) 1590
HhaI GCGC 1 cut(s) 1620
Hin1I GRCGYC 1 cut(s) 105
Hin6I GCGC 1 cut(s) 1618
HinP1I GCGC 1 cut(s) 1618
HindIII AAGCTT 3 cut(s) 1160, 1292, 1724
HinfI GANTC 7 cut(s) 11, 89, 767, 791, 1418, 1659, 1913
HpaII CCGG 3 cut(s) 1216, 1931, 2097
HphI GGTGA 3 cut(s) 107, 855, 1166
Hpy166II GTNNAC 2 cut(s) 31, 1355
Hpy188I TCNGA 9 cut(s) 154, 511, 589, 667, 844, 1672, 1707, 1764, 1980
Hpy188III TCNNGA 9 cut(s) 101, 116, 608, 890, 975, 986, 1310, 1883, 2128
Hpy8I GTNNAC 2 cut(s) 31, 1355
Hpy99I CGWCG 3 cut(s) 110, 125, 689
HpyAV CCTTC 4 cut(s) 1223, 1436, 1805, 1880
HpyCH4III ACNGT 6 cut(s) 727, 832, 950, 1136, 1352, 1591
HpyCH4IV ACGT 3 cut(s) 105, 954, 1116
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 1626, 2090
HpyF3I CTNAG 9 cut(s) 489, 617, 742, 843, 994, 1078, 1281, 1625, 1655
HpySE526I ACGT 3 cut(s) 105, 954, 1116
Hsp92I GRCGYC 1 cut(s) 105
HspAI GCGC 1 cut(s) 1618
KflI GGGWCCC 1 cut(s) 1258
Ksp22I TGATCA 5 cut(s) 319, 421, 892, 982, 1879
LguI GCTCTTC 1 cut(s) 399
LmnI GCTCC 3 cut(s) 634, 1598, 2098
Lsp1109I GCAGC 6 cut(s) 130, 1026, 1555, 1624, 1729, 2010
LweI GCATC 6 cut(s) 115, 747, 1079, 1711, 1754, 1855
MaeI CTAG 6 cut(s) 182, 1056, 1112, 1695, 1829, 1892
MaeII ACGT 3 cut(s) 105, 954, 1116
MaeIII GTNAC 4 cut(s) 5, 215, 950, 1591
MbiI CCGCTC 1 cut(s) 629
MflI RGATCY 3 cut(s) 823, 1232, 1303
MhlI GDGCHC 1 cut(s) 348
MlsI TGGCCA 1 cut(s) 1379
MluNI TGGCCA 1 cut(s) 1379
MlyI GAGTC 1 cut(s) 785
Mox20I TGGCCA 1 cut(s) 1379
Mph1103I ATGCAT 1 cut(s) 557
MscI TGGCCA 1 cut(s) 1379
MseI TTAA 6 cut(s) 264, 527, 785, 999, 1190, 1950
MslI CAYNNNNRTG 3 cut(s) 192, 423, 743
Msp20I TGGCCA 1 cut(s) 1379
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 3 cut(s) 1216, 1931, 2097
MspR9I CCNGG 4 cut(s) 708, 1217, 1898, 2097
Mva1269I GAATGC 2 cut(s) 698, 1153
MvaI CCWGG 2 cut(s) 708, 1898
MvnI CGCG 1 cut(s) 1618
MwoI GCNNNNNNNGC 3 cut(s) 230, 1626, 2090
NciI CCSGG 2 cut(s) 1217, 2097
NcoI CCATGG 1 cut(s) 654
NlaIV GGNNCC 4 cut(s) 345, 1259, 1260, 2094
NmeAIII GCCGAG 2 cut(s) 141, 1431
NmuCI GTSAC 1 cut(s) 950
NsiI ATGCAT 1 cut(s) 557
NspI RCATGY 3 cut(s) 839, 1225, 2112
NspV TTCGAA 1 cut(s) 770
PagI TCATGA 2 cut(s) 607, 985
PceI AGGCCT 1 cut(s) 1896
PciI ACATGT 2 cut(s) 835, 2108
PciSI GCTCTTC 1 cut(s) 399
PctI GAATGC 2 cut(s) 698, 1153
PfeI GAWTC 6 cut(s) 11, 89, 767, 1418, 1659, 1913
PkrI GCNGC 6 cut(s) 145, 1041, 1570, 1639, 1744, 2025
PleI GAGTC 1 cut(s) 785
PpsI GAGTC 1 cut(s) 785
PpuMI RGGWCCY 2 cut(s) 977, 1258
PscI ACATGT 2 cut(s) 835, 2108
PshBI ATTAAT 1 cut(s) 1190
Psp5II RGGWCCY 2 cut(s) 977, 1258
Psp6I CCWGG 2 cut(s) 706, 1896
PspGI CCWGG 2 cut(s) 706, 1896
PspN4I GGNNCC 4 cut(s) 345, 1259, 1260, 2094
PspPI GGNCC 5 cut(s) 164, 274, 977, 1025, 1258
PspPPI RGGWCCY 2 cut(s) 977, 1258
PstNI CAGNNNCTG 2 cut(s) 980, 1016
PsuI RGATCY 3 cut(s) 823, 1232, 1303
PvuII CAGCTG 1 cut(s) 488
RsaI GTAC 2 cut(s) 834, 1138
RsaNI GTAC 2 cut(s) 833, 1137
RseI CAYNNNNRTG 3 cut(s) 192, 423, 743
SapI GCTCTTC 1 cut(s) 399
SaqAI TTAA 6 cut(s) 264, 527, 785, 999, 1190, 1950
SatI GCNGC 6 cut(s) 144, 1040, 1569, 1638, 1743, 2024
Sau96I GGNCC 5 cut(s) 164, 274, 977, 1025, 1258
SchI GAGTC 1 cut(s) 785
ScrFI CCNGG 4 cut(s) 708, 1217, 1898, 2097
SduI GDGCHC 1 cut(s) 348
SfaNI GCATC 6 cut(s) 115, 747, 1079, 1711, 1754, 1855
SfcI CTRYAG 1 cut(s) 936
SfuI TTCGAA 1 cut(s) 770
SinI GGWCC 3 cut(s) 274, 977, 1258
SmiMI CAYNNNNRTG 3 cut(s) 192, 423, 743
SseBI AGGCCT 1 cut(s) 1896
SsiI CCGC 2 cut(s) 627, 1616
SspMI CTAG 6 cut(s) 182, 1056, 1112, 1695, 1829, 1892
StuI AGGCCT 1 cut(s) 1896
StyD4I CCNGG 4 cut(s) 706, 1215, 1896, 2095
StyI CCWWGG 1 cut(s) 654
TaaI ACNGT 6 cut(s) 727, 832, 950, 1136, 1352, 1591
TaiI ACGT 3 cut(s) 108, 957, 1119
TaqI TCGA 5 cut(s) 55, 108, 770, 1576, 2121
TatI WGTACW 1 cut(s) 832
TfiI GAWTC 6 cut(s) 11, 89, 767, 1418, 1659, 1913
Tru1I TTAA 6 cut(s) 264, 527, 785, 999, 1190, 1950
Tru9I TTAA 6 cut(s) 264, 527, 785, 999, 1190, 1950
TscAI CASTG 9 cut(s) 546, 732, 750, 955, 1132, 1357, 1554, 1594, 1738
TseFI GTSAC 1 cut(s) 950
TseI GCWGC 6 cut(s) 143, 1039, 1568, 1637, 1742, 2023
Tsp45I GTSAC 1 cut(s) 950
TspGWI ACGGA 1 cut(s) 206
TspRI CASTG 9 cut(s) 546, 732, 750, 955, 1132, 1357, 1554, 1594, 1738
VpaK11BI GGWCC 3 cut(s) 274, 977, 1258
VspI ATTAAT 1 cut(s) 1190
XapI RAATTY 2 cut(s) 878, 1101
XceI RCATGY 3 cut(s) 839, 1225, 2112
XspI CTAG 6 cut(s) 182, 1056, 1112, 1695, 1829, 1892
ZraI GACGTC 1 cut(s) 106
Zsp2I ATGCAT 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.