Prupe.1G052100_v2.0.a1

Folate-Biopterin Transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
3633190 .. 3634767
1578 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G052100.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 315 bp
ATGTTGTTTCTGTGTGGATTTGGGTACTGGATGCAAGGTTTTAGGTGCTTTCCATGGCTGGCGTTGAACTTCCACATGGCTCACAATCTTAACATGCACCCCTCATGGTGGCTAAACCCTTTTATGGAATCCTCTCTGATGCTCTTTACATTTCTTGTGCGCATAGATTACCTTATATTTCCATTGGAGTTCTTTTACAGGTCCTATCTTGGGGGCCAATGGCAGTTATCCCTGTTGCAGCTAAAGCGCTTCCTACCTGTAAAAATGGTGAATGAAGAAAACAGTTTGGTAGAGAAGATCTCTGTCTTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BT1

Protein Analysis

105

Amino Acids

12.68

Weight (kDa)

7.82

Isoelectric Point (pI)

54.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 161
AfaI GTAC 1 cut(s) 26
AfeI AGCGCT 1 cut(s) 248
AfiI CCNNNNNNNGG 3 cut(s) 108, 124, 210
AgsI TTSAA 1 cut(s) 67
AluBI AGCT 1 cut(s) 241
AluI AGCT 1 cut(s) 241
Aor51HI AGCGCT 1 cut(s) 248
AoxI GGCC 1 cut(s) 214
ApeKI GCWGC 1 cut(s) 238
AspLEI GCGC 2 cut(s) 162, 249
AspS9I GGNCC 2 cut(s) 201, 214
AsuHPI GGTGA 1 cut(s) 280
AvaII GGWCC 1 cut(s) 201
BbvI GCAGC 1 cut(s) 250
BfoI RGCGCY 1 cut(s) 250
BglII AGATCT 1 cut(s) 297
BisI GCNGC 1 cut(s) 239
BlsI GCNGC 1 cut(s) 240
Bme18I GGWCC 1 cut(s) 201
BmgT120I GGNCC 2 cut(s) 201, 214
BmiI GGNNCC 1 cut(s) 215
BmsI GCATC 2 cut(s) 21, 129
BplI GAGNNNNNCTC 1 cut(s) 284
BsaJI CCNNGG 1 cut(s) 53
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 124, 210
Bse1I ACTGG 1 cut(s) 32
BseDI CCNNGG 1 cut(s) 53
BseGI GGATG 1 cut(s) 36
BseLI CCNNNNNNNGG 3 cut(s) 108, 124, 210
BseNI ACTGG 1 cut(s) 32
BseXI GCAGC 1 cut(s) 250
BshFI GGCC 1 cut(s) 216
BslI CCNNNNNNNGG 3 cut(s) 108, 124, 210
BsnI GGCC 1 cut(s) 216
Bsp143I GATC 1 cut(s) 297
Bsp19I CCATGG 1 cut(s) 53
BspANI GGCC 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 215
BsrI ACTGG 1 cut(s) 32
BssECI CCNNGG 1 cut(s) 53
BssMI GATC 1 cut(s) 297
BssT1I CCWWGG 1 cut(s) 53
Bst4CI ACNGT 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 60
BstDSI CCRYGG 1 cut(s) 53
BstF5I GGATG 1 cut(s) 36
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 2 cut(s) 162, 249
BstKTI GATC 1 cut(s) 300
BstMBI GATC 1 cut(s) 297
BstMWI GCNNNNNNNGC 1 cut(s) 244
BstNSI RCATGY 1 cut(s) 97
BstV1I GCAGC 1 cut(s) 250
BstX2I RGATCY 1 cut(s) 297
BstYI RGATCY 1 cut(s) 297
BsuRI GGCC 1 cut(s) 216
BtgI CCRYGG 1 cut(s) 53
BtsCI GGATG 1 cut(s) 36
Cac8I GCNNGC 1 cut(s) 60
CfoI GCGC 2 cut(s) 162, 249
Cfr13I GGNCC 2 cut(s) 201, 214
Csp6I GTAC 1 cut(s) 25
CviAII CATG 4 cut(s) 54, 76, 94, 105
CviJI RGCY 5 cut(s) 58, 80, 112, 216, 241
CviKI_1 RGCY 5 cut(s) 58, 80, 112, 216, 241
CviQI GTAC 1 cut(s) 25
DpnI GATC 1 cut(s) 299
DpnII GATC 1 cut(s) 297
Eco130I CCWWGG 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 201
Eco47III AGCGCT 1 cut(s) 248
EcoO109I RGGNCCY 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 53
ErhI CCWWGG 1 cut(s) 53
FaeI CATG 4 cut(s) 57, 79, 97, 108
FaiI YATR 7 cut(s) 55, 77, 95, 106, 125, 164, 176
FatI CATG 4 cut(s) 53, 75, 93, 104
Fnu4HI GCNGC 1 cut(s) 239
FokI GGATG 1 cut(s) 43
Fsp4HI GCNGC 1 cut(s) 239
FspAI RTGCGCAY 1 cut(s) 161
FspI TGCGCA 1 cut(s) 161
GlaI GCGC 2 cut(s) 161, 248
GluI GCNGC 1 cut(s) 239
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 1 cut(s) 216
HhaI GCGC 2 cut(s) 162, 249
Hin1II CATG 4 cut(s) 57, 79, 97, 108
Hin6I GCGC 2 cut(s) 160, 247
HinP1I GCGC 2 cut(s) 160, 247
HinfI GANTC 1 cut(s) 128
HphI GGTGA 1 cut(s) 280
Hpy188I TCNGA 1 cut(s) 138
HpyCH4III ACNGT 1 cut(s) 284
HpyCH4V TGCA 3 cut(s) 34, 97, 238
HpyF10VI GCNNNNNNNGC 1 cut(s) 244
Hsp92II CATG 4 cut(s) 57, 79, 97, 108
HspAI GCGC 2 cut(s) 160, 247
Kzo9I GATC 1 cut(s) 297
LpnPI CCDG 5 cut(s) 13, 44, 184, 245, 270
Lsp1109I GCAGC 1 cut(s) 250
LweI GCATC 2 cut(s) 21, 129
MalI GATC 1 cut(s) 299
MboI GATC 1 cut(s) 297
MboII GAAGA 2 cut(s) 287, 307
MflI RGATCY 1 cut(s) 297
MnlI CCTC 2 cut(s) 112, 142
MseI TTAA 1 cut(s) 90
MwoI GCNNNNNNNGC 1 cut(s) 244
NcoI CCATGG 1 cut(s) 53
NdeII GATC 1 cut(s) 297
NlaIII CATG 4 cut(s) 57, 79, 97, 108
NlaIV GGNNCC 1 cut(s) 215
NsbI TGCGCA 1 cut(s) 161
NspI RCATGY 1 cut(s) 97
PfeI GAWTC 1 cut(s) 128
PkrI GCNGC 1 cut(s) 240
PpuMI RGGWCCY 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 201
PspN4I GGNNCC 1 cut(s) 215
PspPI GGNCC 2 cut(s) 201, 214
PspPPI RGGWCCY 1 cut(s) 201
PsuI RGATCY 1 cut(s) 297
RsaI GTAC 1 cut(s) 26
RsaNI GTAC 1 cut(s) 25
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 1 cut(s) 239
Sau3AI GATC 1 cut(s) 297
Sau96I GGNCC 2 cut(s) 201, 214
SetI ASST 6 cut(s) 40, 47, 174, 203, 243, 259
SfaNI GCATC 2 cut(s) 21, 129
SinI GGWCC 1 cut(s) 201
StyI CCWWGG 1 cut(s) 53
TaaI ACNGT 1 cut(s) 284
TfiI GAWTC 1 cut(s) 128
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TseI GCWGC 1 cut(s) 238
TspDTI ATGAA 1 cut(s) 288
VpaK11BI GGWCC 1 cut(s) 201
XceI RCATGY 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.