Prupe.1G055700_v2.0.a1

transferase activity, transferring hexosyl groups

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
3948448 .. 3948789
342 bp
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UTR
Exon/CDS
Intron
Prupe.1G055700.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 342 bp
ATGGTTGTTCGCAGGCCTTTTCCAGTTCAAAGCCATATGAAGGCAATGCTTCAACTAGCAAAGCTCCTCCACAATAGAGGTGTTCATGTAACCTTGGTCAACACAGAGTTCAATCACAAAAGGCTTCTCAAGTCTCTAGGCCCAAACTCCCTCGACGGTGTGCCTAGTTTCCGATTCAAAACCATACCAGATGGCCTTCAAAGTTCAGATGAAGATACCCAACAAGACATGTTATTGCTTGTAGAGTCCATCAAAAAGAATTTCTTGGCTCCATTTCGGGACCTCATTGTTGGAAGTTTGAAAGCAAATGTCCCACATTGGAGAAAACAAAAGGTGCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.89

Weight (kDa)

10.34

Isoelectric Point (pI)

51.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 334
AcsI RAATTY 1 cut(s) 259
AfiI CCNNNNNNNGG 1 cut(s) 40
AflIII ACRYGT 1 cut(s) 228
AgsI TTSAA 6 cut(s) 29, 53, 112, 178, 200, 301
AluBI AGCT 1 cut(s) 64
AluI AGCT 1 cut(s) 64
Alw26I GTCTC 1 cut(s) 138
AoxI GGCC 3 cut(s) 14, 139, 193
ApoI RAATTY 1 cut(s) 259
AspS9I GGNCC 2 cut(s) 140, 280
AvaII GGWCC 1 cut(s) 280
BanI GGYRCC 1 cut(s) 334
BccI CCATC 2 cut(s) 185, 257
BcoDI GTCTC 1 cut(s) 138
BfaI CTAG 3 cut(s) 56, 137, 165
Bme18I GGWCC 1 cut(s) 280
BmgT120I GGNCC 2 cut(s) 140, 280
BmiI GGNNCC 3 cut(s) 270, 281, 336
BpuEI CTTGAG 1 cut(s) 113
BsaJI CCNNGG 1 cut(s) 93
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 1 cut(s) 23
Bse3DI GCAATG 1 cut(s) 51
BseDI CCNNGG 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 40
BseMI GCAATG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 23
BseRI GAGGAG 1 cut(s) 56
BshFI GGCC 3 cut(s) 16, 141, 195
BshNI GGYRCC 1 cut(s) 334
BslFI GGGAC 2 cut(s) 293, 296
BslI CCNNNNNNNGG 1 cut(s) 40
BsmAI GTCTC 1 cut(s) 138
BsmFI GGGAC 2 cut(s) 293, 296
BsnI GGCC 3 cut(s) 16, 141, 195
BspANI GGCC 3 cut(s) 16, 141, 195
BspLI GGNNCC 3 cut(s) 270, 281, 336
BspT107I GGYRCC 1 cut(s) 334
BsrDI GCAATG 1 cut(s) 51
BsrI ACTGG 1 cut(s) 23
BssECI CCNNGG 1 cut(s) 93
BssT1I CCWWGG 1 cut(s) 93
Bst4CI ACNGT 1 cut(s) 158
BstC8I GCNNGC 1 cut(s) 14
BstMAI GTCTC 1 cut(s) 138
BstNSI RCATGY 1 cut(s) 232
BsuRI GGCC 3 cut(s) 16, 141, 195
Cac8I GCNNGC 1 cut(s) 14
Cfr13I GGNCC 2 cut(s) 140, 280
CviAII CATG 2 cut(s) 86, 229
CviJI RGCY 7 cut(s) 16, 33, 64, 124, 141, 195, 269
CviKI_1 RGCY 7 cut(s) 16, 33, 64, 124, 141, 195, 269
Eco130I CCWWGG 1 cut(s) 93
Eco147I AGGCCT 1 cut(s) 16
Eco47I GGWCC 1 cut(s) 280
EcoO109I RGGNCCY 1 cut(s) 280
EcoT14I CCWWGG 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 93
FaeI CATG 2 cut(s) 89, 232
FaiI YATR 6 cut(s) 36, 38, 87, 185, 230, 340
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FaqI GGGAC 2 cut(s) 293, 296
FatI CATG 2 cut(s) 85, 228
FauNDI CATATG 1 cut(s) 36
FspBI CTAG 3 cut(s) 56, 137, 165
HaeIII GGCC 3 cut(s) 16, 141, 195
Hin1II CATG 2 cut(s) 89, 232
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 2 cut(s) 174, 245
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 2 cut(s) 173, 208
Hpy188III TCNNGA 1 cut(s) 278
Hpy8I GTNNAC 1 cut(s) 100
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 2 cut(s) 34, 206
HpyCH4III ACNGT 1 cut(s) 158
Hsp92II CATG 2 cut(s) 89, 232
LmnI GCTCC 2 cut(s) 69, 274
LpnPI CCDG 2 cut(s) 36, 201
MaeI CTAG 3 cut(s) 56, 137, 165
MaeIII GTNAC 1 cut(s) 88
MboII GAAGA 1 cut(s) 224
MluCI AATT 1 cut(s) 259
MlyI GAGTC 1 cut(s) 254
MmeI TCCRAC 1 cut(s) 271
MnlI CCTC 4 cut(s) 71, 77, 161, 293
NdeI CATATG 1 cut(s) 36
NlaIII CATG 2 cut(s) 89, 232
NlaIV GGNNCC 3 cut(s) 270, 281, 336
NspI RCATGY 1 cut(s) 232
PceI AGGCCT 1 cut(s) 16
PciI ACATGT 1 cut(s) 228
PfeI GAWTC 1 cut(s) 174
PleI GAGTC 1 cut(s) 253
PpsI GAGTC 1 cut(s) 253
PpuMI RGGWCCY 1 cut(s) 280
PscI ACATGT 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 280
PspN4I GGNNCC 3 cut(s) 270, 281, 336
PspPI GGNCC 2 cut(s) 140, 280
PspPPI RGGWCCY 1 cut(s) 280
Sau96I GGNCC 2 cut(s) 140, 280
SchI GAGTC 1 cut(s) 254
SetI ASST 5 cut(s) 66, 82, 95, 285, 336
SinI GGWCC 1 cut(s) 280
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 1 cut(s) 259
SseBI AGGCCT 1 cut(s) 16
SspMI CTAG 3 cut(s) 56, 137, 165
StuI AGGCCT 1 cut(s) 16
StyI CCWWGG 1 cut(s) 93
TaaI ACNGT 1 cut(s) 158
TaqI TCGA 1 cut(s) 153
TasI AATT 1 cut(s) 259
TfiI GAWTC 1 cut(s) 174
TspDTI ATGAA 3 cut(s) 53, 74, 225
VpaK11BI GGWCC 1 cut(s) 280
XapI RAATTY 1 cut(s) 259
XceI RCATGY 1 cut(s) 232
XspI CTAG 3 cut(s) 56, 137, 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.