Prupe.1G082200_v2.0.a1

cysteine-rich repeat secretory protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
6091730 .. 6092882
1153 bp
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UTR
Exon/CDS
Intron
Prupe.1G082200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 561 bp
ATGCCTGCCATGCAAGTAATTAACGAAAATTTTGATGTTGAAGTTAACGCTGAAACCAGATTGCAACAAATTGAAAAGCATAGCGTATGCATACTCGAATGTTTGGACTCGAACACGTTCACAGGAAATGATACTTACCATGAAAATTTGGAAAAACTTACAACTTTTCTTTCTGAGCATGTAGCTTCTTCTCAATTTATCAATGACTCAATAGGGCTTTACCCAAACGAATTATATGGTTTTGGTCTTTGTTTTGGTTCTACCTCTCCCACAGATTGTAGGAACTACACACACTGCCCTTATAACAAAGGTGCAGTCATATGGTTTGCAGATGGTCAAGTAAAATACATGAATAAAGATTTCTTATGTCAGGCTGATGATAGATTTCGATATGATTTAGCTTTAAAAAAAGTGAGCGGGAATCATCGACCAATTACTAAAACAACTTTGTTGATTGTTCGTGGTGTCTTTCCAACTTGTTGTGATGGAAAAATAGGAGCCACGATTTACTCTGAGAGTTGTTGGATAGCGTTTTCTGTAGGAAATGCTTACTTTGATTAA

Protein Analysis

187

Amino Acids

21.01

Weight (kDa)

5.16

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AccBSI CCGCTC 1 cut(s) 417
AciI CCGC 1 cut(s) 417
AcsI RAATTY 2 cut(s) 28, 145
AflIII ACRYGT 1 cut(s) 114
AgsI TTSAA 2 cut(s) 41, 74
AluBI AGCT 2 cut(s) 185, 401
AluI AGCT 2 cut(s) 185, 401
ApoI RAATTY 2 cut(s) 28, 145
ArsI GACNNNNNNTTYG 2 cut(s) 300, 332
Asp700I GAANNNNTTC 1 cut(s) 116
BccI CCATC 2 cut(s) 326, 479
BfmI CTRYAG 1 cut(s) 537
BmiI GGNNCC 1 cut(s) 499
BseMII CTCAG 2 cut(s) 165, 504
BsgI GTGCAG 1 cut(s) 333
BspACI CCGC 1 cut(s) 417
BspCNI CTCAG 2 cut(s) 166, 505
BspLI GGNNCC 1 cut(s) 499
BsrBI CCGCTC 1 cut(s) 417
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 2 cut(s) 174, 513
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNSI RCATGY 1 cut(s) 182
BstSFI CTRYAG 1 cut(s) 537
BtsI GCAGTG 1 cut(s) 292
BtsIMutI CAGTG 1 cut(s) 292
Cac8I GCNNGC 1 cut(s) 6
CviAII CATG 4 cut(s) 10, 140, 179, 349
CviJI RGCY 5 cut(s) 185, 217, 374, 401, 500
CviKI_1 RGCY 5 cut(s) 185, 217, 374, 401, 500
DdeI CTNAG 2 cut(s) 174, 513
DraI TTTAAA 1 cut(s) 405
EcoT22I ATGCAT 1 cut(s) 92
FaeI CATG 4 cut(s) 13, 143, 182, 352
FatI CATG 4 cut(s) 9, 139, 178, 348
FauI CCCGC 1 cut(s) 410
FauNDI CATATG 1 cut(s) 320
Hin1II CATG 4 cut(s) 13, 143, 182, 352
HincII GTYRAC 1 cut(s) 46
HindII GTYRAC 1 cut(s) 46
HinfI GANTC 3 cut(s) 107, 206, 421
HpaI GTTAAC 1 cut(s) 46
Hpy166II GTNNAC 2 cut(s) 46, 120
Hpy188I TCNGA 2 cut(s) 175, 514
Hpy8I GTNNAC 2 cut(s) 46, 120
HpyCH4IV ACGT 1 cut(s) 116
HpyCH4V TGCA 5 cut(s) 13, 64, 90, 314, 329
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 2 cut(s) 174, 513
HpySE526I ACGT 1 cut(s) 116
Hsp92II CATG 4 cut(s) 13, 143, 182, 352
KspAI GTTAAC 1 cut(s) 46
LmnI GCTCC 1 cut(s) 497
LpnPI CCDG 4 cut(s) 18, 70, 108, 356
MaeII ACGT 1 cut(s) 116
MbiI CCGCTC 1 cut(s) 417
MboII GAAGA 1 cut(s) 180
MluCI AATT 7 cut(s) 18, 28, 69, 145, 194, 230, 432
MlyI GAGTC 2 cut(s) 101, 200
MmeI TCCRAC 2 cut(s) 497, 503
MnlI CCTC 1 cut(s) 274
Mph1103I ATGCAT 1 cut(s) 92
MroXI GAANNNNTTC 1 cut(s) 116
MseI TTAA 4 cut(s) 21, 45, 404, 559
MwoI GCNNNNNNNGC 1 cut(s) 10
NdeI CATATG 1 cut(s) 320
NlaIII CATG 4 cut(s) 13, 143, 182, 352
NlaIV GGNNCC 1 cut(s) 499
NsiI ATGCAT 1 cut(s) 92
NspI RCATGY 1 cut(s) 182
PdmI GAANNNNTTC 1 cut(s) 116
PfeI GAWTC 1 cut(s) 421
PleI GAGTC 2 cut(s) 101, 200
PpsI GAGTC 2 cut(s) 101, 200
PsiI TTATAA 1 cut(s) 303
PspN4I GGNNCC 1 cut(s) 499
SaqAI TTAA 4 cut(s) 21, 45, 404, 559
SchI GAGTC 2 cut(s) 101, 200
SetI ASST 5 cut(s) 119, 187, 266, 313, 403
SfcI CTRYAG 1 cut(s) 537
Sse9I AATT 7 cut(s) 18, 28, 69, 145, 194, 230, 432
SsiI CCGC 1 cut(s) 417
TaiI ACGT 1 cut(s) 119
TaqI TCGA 4 cut(s) 96, 110, 388, 427
TasI AATT 7 cut(s) 18, 28, 69, 145, 194, 230, 432
TfiI GAWTC 1 cut(s) 421
Tru1I TTAA 4 cut(s) 21, 45, 404, 559
Tru9I TTAA 4 cut(s) 21, 45, 404, 559
TscAI CASTG 1 cut(s) 299
TspDTI ATGAA 2 cut(s) 156, 365
TspRI CASTG 1 cut(s) 299
XapI RAATTY 2 cut(s) 28, 145
XceI RCATGY 1 cut(s) 182
XmnI GAANNNNTTC 1 cut(s) 116
Zsp2I ATGCAT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.