Prupe.1G085800_v2.0.a1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
6373629 .. 6374489
861 bp
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UTR
Exon/CDS
Intron
Prupe.1G085800.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 489 bp
ATGAGGGCTAAAAACGTCATTTCTAGTTCATCAACCCCTTCTTCATCTTCTACCTCCTCGACTCCTCACAACCATAGCCATCACCACCATCACAAGGGCTTTTCTCAACCCCTCGACACCATAGCCACCCCTCACCACCACAAGGGCTTTTCGAAGAAACTCTTTGGTGAAGAATCTGTTTGCCAAGGTTTTGAAGCTTTGCGTGCGTCAAAGCATTTGATAAGAAGTGTTAGCCATAACTTGGGGAGGAAGAATCAGAGACCTAAAAGAGAAGAAGAGGATGATGCGAGGGGAATATCTTTGAGGTGTCTTACTCTATATGGTAGGGGTGGGGGTTGCAAAGTAGGTGCTGACACATGGGATGATTTTGGAAATCAGAGTTACAAAAGGAGGTCAAATGCCAGCAATGAAGGCAAGGGATACATATGGATGTGTGGTACTAAGGCCATCTCCAACCCAAGGGGTGAAAACACAAATTTTCAGTTTTGA

Protein Analysis

163

Amino Acids

18.02

Weight (kDa)

9.77

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 241
AcsI RAATTY 1 cut(s) 475
AfaI GTAC 1 cut(s) 439
AfiI CCNNNNNNNGG 4 cut(s) 94, 142, 241, 459
AgsI TTSAA 1 cut(s) 194
AluBI AGCT 1 cut(s) 197
AluI AGCT 1 cut(s) 197
Alw26I GTCTC 1 cut(s) 253
AoxI GGCC 1 cut(s) 444
ApoI RAATTY 1 cut(s) 475
AsuHPI GGTGA 4 cut(s) 74, 125, 179, 476
AsuII TTCGAA 1 cut(s) 152
BccI CCATC 3 cut(s) 87, 96, 455
BciVI GTATCC 1 cut(s) 413
BcoDI GTCTC 1 cut(s) 253
BfaI CTAG 1 cut(s) 24
BfuI GTATCC 1 cut(s) 413
BmsI GCATC 1 cut(s) 274
Bpu14I TTCGAA 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 253
BsaJI CCNNGG 2 cut(s) 184, 458
Bsc4I CCNNNNNNNGG 4 cut(s) 94, 142, 241, 459
Bse3DI GCAATG 1 cut(s) 412
BseDI CCNNGG 2 cut(s) 184, 458
BseGI GGATG 3 cut(s) 286, 367, 435
BseLI CCNNNNNNNGG 4 cut(s) 94, 142, 241, 459
BseMI GCAATG 1 cut(s) 412
BseRI GAGGAG 2 cut(s) 46, 54
BshFI GGCC 1 cut(s) 446
BslI CCNNNNNNNGG 4 cut(s) 94, 142, 241, 459
BsmAI GTCTC 1 cut(s) 253
BsnI GGCC 1 cut(s) 446
Bso31I GGTCTC 1 cut(s) 253
Bsp119I TTCGAA 1 cut(s) 152
BspANI GGCC 1 cut(s) 446
BspT104I TTCGAA 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 253
BsrDI GCAATG 1 cut(s) 412
BssECI CCNNGG 2 cut(s) 184, 458
BssT1I CCWWGG 2 cut(s) 184, 458
Bst6I CTCTTC 1 cut(s) 270
BstBI TTCGAA 1 cut(s) 152
BstC8I GCNNGC 2 cut(s) 204, 403
BstDEI CTNAG 1 cut(s) 441
BstF5I GGATG 3 cut(s) 286, 367, 435
BstMAI GTCTC 1 cut(s) 253
BstMWI GCNNNNNNNGC 2 cut(s) 203, 411
BsuI GTATCC 1 cut(s) 413
BsuRI GGCC 1 cut(s) 446
BtsCI GGATG 3 cut(s) 286, 367, 435
Cac8I GCNNGC 2 cut(s) 204, 403
CseI GACGC 1 cut(s) 195
Csp6I GTAC 1 cut(s) 438
CviAII CATG 1 cut(s) 357
CviJI RGCY 8 cut(s) 8, 78, 99, 125, 147, 197, 234, 446
CviKI_1 RGCY 8 cut(s) 8, 78, 99, 125, 147, 197, 234, 446
CviQI GTAC 1 cut(s) 438
DdeI CTNAG 1 cut(s) 441
Eam1104I CTCTTC 1 cut(s) 270
EarI CTCTTC 1 cut(s) 270
Eco130I CCWWGG 2 cut(s) 184, 458
Eco31I GGTCTC 1 cut(s) 253
EcoT14I CCWWGG 2 cut(s) 184, 458
ErhI CCWWGG 2 cut(s) 184, 458
FaeI CATG 1 cut(s) 360
FaiI YATR 8 cut(s) 75, 122, 237, 319, 321, 358, 425, 427
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FatI CATG 1 cut(s) 356
FauNDI CATATG 1 cut(s) 425
FokI GGATG 3 cut(s) 293, 374, 442
FspBI CTAG 1 cut(s) 24
HaeIII GGCC 1 cut(s) 446
HgaI GACGC 1 cut(s) 195
Hin1II CATG 1 cut(s) 360
HindIII AAGCTT 1 cut(s) 195
HinfI GANTC 3 cut(s) 61, 173, 253
HphI GGTGA 4 cut(s) 74, 125, 179, 476
Hpy188I TCNGA 2 cut(s) 258, 378
HpyAV CCTTC 2 cut(s) 48, 404
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 1 cut(s) 339
HpyF10VI GCNNNNNNNGC 2 cut(s) 203, 411
HpyF3I CTNAG 1 cut(s) 441
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 1 cut(s) 360
LpnPI CCDG 1 cut(s) 415
LweI GCATC 1 cut(s) 274
MaeI CTAG 1 cut(s) 24
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 1 cut(s) 380
MboII GAAGA 7 cut(s) 33, 39, 166, 182, 262, 284, 287
MluCI AATT 1 cut(s) 475
MlyI GAGTC 1 cut(s) 55
MmeI TCCRAC 1 cut(s) 477
MslI CAYNNNNRTG 1 cut(s) 428
MwoI GCNNNNNNNGC 2 cut(s) 203, 411
NdeI CATATG 1 cut(s) 425
NlaIII CATG 1 cut(s) 360
NspV TTCGAA 1 cut(s) 152
PfeI GAWTC 2 cut(s) 173, 253
PflMI CCANNNNNTGG 1 cut(s) 241
PleI GAGTC 1 cut(s) 55
PpsI GAGTC 1 cut(s) 55
RsaI GTAC 1 cut(s) 439
RsaNI GTAC 1 cut(s) 438
RseI CAYNNNNRTG 1 cut(s) 428
SchI GAGTC 1 cut(s) 55
SetI ASST 8 cut(s) 18, 56, 190, 199, 265, 308, 349, 395
SfaNI GCATC 1 cut(s) 274
SfuI TTCGAA 1 cut(s) 152
SmiMI CAYNNNNRTG 1 cut(s) 428
Sse9I AATT 1 cut(s) 475
SspMI CTAG 1 cut(s) 24
StyI CCWWGG 2 cut(s) 184, 458
TaiI ACGT 1 cut(s) 18
TaqI TCGA 3 cut(s) 59, 114, 152
TasI AATT 1 cut(s) 475
TfiI GAWTC 2 cut(s) 173, 253
TspDTI ATGAA 3 cut(s) 18, 33, 423
Van91I CCANNNNNTGG 1 cut(s) 241
XapI RAATTY 1 cut(s) 475
XspI CTAG 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.