Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

11933251 .. 11934381

Gene Structure 1131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G151100.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 522 bp

ATGGATCCATTTTTCCGGCGAAAAGATAAGGTTATCTTTGTAATGGGAGCCACCGGGACTGGCAAGTCCAGGCTTTCCATAGACCTCGCAGCCTGTTTCCCTGCTGAGATTATAAACTCTGACAAACTGCAAGTCTACAGAGGCCTGGACAAAGTCACTGAGGAGGAGTGTAGAGGCATACCTCACCACTTGCTACGCGAAATCGATCCAAGCTCAAACTTCACGGCCAATGATTTCAAGCACATCGAATCGATCTTCATCGCCGGTGGTTCGAATTCCTACATCGATCGGACGGTGGGTTTGCTGGATGAGGTCAGGAGAACTGAAGCTGACGAAACCCGAGCGGCTACTTCTAAAATTAAAGAAAGCGCTTGCCAATTGCAAAAGATCCGTCGCCTGCACAGCCGACGAAACTGGAACATGCACCGCCTCGATCGATGCTACACAAATTTTCTTCAAGCACCACGTGGAGGCCGATCAAGCATGGGAAAAACTCGTGGCAAGAACCAAGCTCCTACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009058 GO:0009308 GO:0009451 GO:0009536 GO:0009653 GO:0009690 GO:0009691 GO:0009824 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010467 GO:0010817 GO:0016043 GO:0016049 GO:0016070 GO:0016740 GO:0016765 GO:0022414 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0034470 GO:0034641 GO:0034660 GO:0034754 GO:0040007 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046483 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0052381 GO:0052622 GO:0052623 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00908 ko01100 ko01110 map00908 map01100 map01110

Pfam Domains

Protein Families

IPPT

Protein Analysis

174

Amino Acids

19.66

Weight (kDa)

9.69

Isoelectric Point (pI)

51.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	113
AasI	GACNNNNNNGTC	1 cut(s)	64
AccBSI	CCGCTC	1 cut(s)	344
AccI	GTMKAC	1 cut(s)	135
AccII	CGCG	1 cut(s)	198
AciI	CCGC	2 cut(s)	344, 427
AclWI	GGATC	3 cut(s)	12, 200, 382
AcoI	YGGCCR	1 cut(s)	225
AcsI	RAATTY	2 cut(s)	274, 448
AcuI	CTGAAG	1 cut(s)	345
AcvI	CACGTG	1 cut(s)	467
AdeI	CACNNNGTG	1 cut(s)	467
AfeI	AGCGCT	1 cut(s)	370
AfiI	CCNNNNNNNGG	1 cut(s)	470
AgsI	TTSAA	2 cut(s)	238, 458
AjnI	CCWGG	2 cut(s)	68, 144
AluBI	AGCT	3 cut(s)	213, 329, 512
AluI	AGCT	3 cut(s)	213, 329, 512
AlwI	GGATC	3 cut(s)	12, 200, 382
Ama87I	CYCGRG	1 cut(s)	339
Aor51HI	AGCGCT	1 cut(s)	370
AoxI	GGCC	3 cut(s)	142, 225, 472
ApeKI	GCWGC	1 cut(s)	89
ApoI	RAATTY	2 cut(s)	274, 448
ArsI	GACNNNNNNTTYG	6 cut(s)	117, 149, 283, 315, 376, 408
AspLEI	GCGC	1 cut(s)	371
AsuC2I	CCSGG	1 cut(s)	55
AsuHPI	GGTGA	1 cut(s)	176
AsuII	TTCGAA	1 cut(s)	272
AvaI	CYCGRG	1 cut(s)	339
BamHI	GGATCC	1 cut(s)	4
BauI	CACGAG	1 cut(s)	495
BbrPI	CACGTG	1 cut(s)	467
BbvI	GCAGC	1 cut(s)	101
BceAI	ACGGC	1 cut(s)	240
BciT130I	CCWGG	2 cut(s)	70, 146
BcnI	CCSGG	1 cut(s)	55
BfmI	CTRYAG	1 cut(s)	136
BfoI	RGCGCY	1 cut(s)	372
BisI	GCNGC	2 cut(s)	90, 345
BlsI	GCNGC	2 cut(s)	91, 346
Bme1390I	CCNGG	3 cut(s)	55, 70, 146
BmeT110I	CYCGRG	1 cut(s)	339
BmiI	GGNNCC	2 cut(s)	6, 49
BmrFI	CCNGG	3 cut(s)	55, 70, 146
BmsI	GCATC	1 cut(s)	428
Bpu14I	TTCGAA	1 cut(s)	272
BpuMI	CCSGG	1 cut(s)	55
Bsa29I	ATCGAT	4 cut(s)	204, 251, 285, 436
BsaAI	YACGTR	1 cut(s)	467
BsaBI	GATNNNNATC	1 cut(s)	257
Bsc4I	CCNNNNNNNGG	1 cut(s)	470
Bse118I	RCCGGY	1 cut(s)	263
Bse1I	ACTGG	2 cut(s)	64, 419
Bse8I	GATNNNNATC	1 cut(s)	257
BseBI	CCWGG	2 cut(s)	70, 146
BseCI	ATCGAT	4 cut(s)	204, 251, 285, 436
BseGI	GGATG	1 cut(s)	313
BseJI	GATNNNNATC	1 cut(s)	257
BseLI	CCNNNNNNNGG	1 cut(s)	470
BseMII	CTCAG	2 cut(s)	96, 150
BseNI	ACTGG	2 cut(s)	64, 419
BseRI	GAGGAG	2 cut(s)	176, 179
BseXI	GCAGC	1 cut(s)	101
BsgI	GTGCAG	1 cut(s)	383
Bsh1236I	CGCG	1 cut(s)	198
Bsh1285I	CGRYCG	2 cut(s)	289, 436
BshFI	GGCC	3 cut(s)	144, 227, 474
BshVI	ATCGAT	4 cut(s)	204, 251, 285, 436
BsiEI	CGRYCG	2 cut(s)	289, 436
BsiHKCI	CYCGRG	1 cut(s)	339
BsiSI	CCGG	3 cut(s)	16, 54, 264
BslFI	GGGAC	1 cut(s)	70
BslI	CCNNNNNNNGG	1 cut(s)	470
BsmFI	GGGAC	1 cut(s)	70
BsnI	GGCC	3 cut(s)	144, 227, 474
BsoBI	CYCGRG	1 cut(s)	339
Bsp119I	TTCGAA	1 cut(s)	272
Bsp143I	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
BspACI	CCGC	2 cut(s)	344, 427
BspANI	GGCC	3 cut(s)	144, 227, 474
BspCNI	CTCAG	2 cut(s)	97, 151
BspDI	ATCGAT	4 cut(s)	204, 251, 285, 436
BspFNI	CGCG	1 cut(s)	198
BspLI	GGNNCC	2 cut(s)	6, 49
BspPI	GGATC	3 cut(s)	12, 200, 382
BspT104I	TTCGAA	1 cut(s)	272
BsrBI	CCGCTC	1 cut(s)	344
BsrFI	RCCGGY	1 cut(s)	263
BsrI	ACTGG	2 cut(s)	64, 419
BssAI	RCCGGY	1 cut(s)	263
BssMI	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
BssSI	CACGAG	1 cut(s)	495
Bst2BI	CACGAG	1 cut(s)	495
Bst2UI	CCWGG	2 cut(s)	70, 146
Bst4CI	ACNGT	1 cut(s)	295
BstBAI	YACGTR	1 cut(s)	467
BstBI	TTCGAA	1 cut(s)	272
BstC8I	GCNNGC	2 cut(s)	373, 398
BstDEI	CTNAG	2 cut(s)	105, 159
BstF5I	GGATG	1 cut(s)	313
BstFNI	CGCG	1 cut(s)	198
BstH2I	RGCGCY	1 cut(s)	372
BstHHI	GCGC	1 cut(s)	371
BstKTI	GATC	7 cut(s)	7, 208, 255, 289, 390, 436, 479
BstMBI	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
BstMCI	CGRYCG	2 cut(s)	289, 436
BstMWI	GCNNNNNNNGC	2 cut(s)	402, 480
BstNI	CCWGG	2 cut(s)	70, 146
BstNSI	RCATGY	1 cut(s)	424
BstSCI	CCNGG	3 cut(s)	53, 68, 144
BstSFI	CTRYAG	1 cut(s)	136
BstUI	CGCG	1 cut(s)	198
BstV1I	GCAGC	1 cut(s)	101
BstX2I	RGATCY	2 cut(s)	4, 387
BstYI	RGATCY	2 cut(s)	4, 387
Bsu15I	ATCGAT	4 cut(s)	204, 251, 285, 436
BsuRI	GGCC	3 cut(s)	144, 227, 474
BsuTUI	ATCGAT	4 cut(s)	204, 251, 285, 436
BtgZI	GCGATG	1 cut(s)	244
BtsCI	GGATG	1 cut(s)	313
BtsIMutI	CAGTG	1 cut(s)	156
Cac8I	GCNNGC	2 cut(s)	373, 398
CfoI	GCGC	1 cut(s)	371
Cfr10I	RCCGGY	1 cut(s)	263
ClaI	ATCGAT	4 cut(s)	204, 251, 285, 436
CviAII	CATG	2 cut(s)	421, 484
DdeI	CTNAG	2 cut(s)	105, 159
DpnI	GATC	7 cut(s)	6, 207, 254, 288, 389, 435, 478
DpnII	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
DraIII	CACNNNGTG	1 cut(s)	467
DrdI	GACNNNNNNGTC	1 cut(s)	64
DseDI	GACNNNNNNGTC	1 cut(s)	64
EaeI	YGGCCR	1 cut(s)	225
Eco147I	AGGCCT	1 cut(s)	144
Eco47III	AGCGCT	1 cut(s)	370
Eco57I	CTGAAG	1 cut(s)	345
Eco72I	CACGTG	1 cut(s)	467
Eco88I	CYCGRG	1 cut(s)	339
EcoRI	GAATTC	1 cut(s)	274
EcoRII	CCWGG	2 cut(s)	68, 144
FaeI	CATG	2 cut(s)	424, 487
FaiI	YATR	6 cut(s)	80, 113, 179, 422, 485, 520
FalI	AAGNNNNNCTT	2 cut(s)	20, 52
FaqI	GGGAC	1 cut(s)	70
FatI	CATG	2 cut(s)	420, 483
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	2 cut(s)	90, 345
FokI	GGATG	1 cut(s)	320
Fsp4HI	GCNGC	2 cut(s)	90, 345
GlaI	GCGC	1 cut(s)	370
GluI	GCNGC	2 cut(s)	90, 345
HaeII	RGCGCY	1 cut(s)	372
HaeIII	GGCC	3 cut(s)	144, 227, 474
HapII	CCGG	3 cut(s)	16, 54, 264
HhaI	GCGC	1 cut(s)	371
Hin1II	CATG	2 cut(s)	424, 487
Hin6I	GCGC	1 cut(s)	369
HinP1I	GCGC	1 cut(s)	369
HinfI	GANTC	1 cut(s)	248
HpaII	CCGG	3 cut(s)	16, 54, 264
HphI	GGTGA	1 cut(s)	176
Hpy166II	GTNNAC	1 cut(s)	136
Hpy188I	TCNGA	2 cut(s)	121, 291
Hpy188III	TCNNGA	1 cut(s)	316
Hpy8I	GTNNAC	1 cut(s)	136
Hpy99I	CGWCG	2 cut(s)	396, 411
HpyCH4III	ACNGT	1 cut(s)	295
HpyCH4IV	ACGT	1 cut(s)	466
HpyCH4V	TGCA	4 cut(s)	130, 382, 400, 424
HpyF10VI	GCNNNNNNNGC	2 cut(s)	402, 480
HpyF3I	CTNAG	2 cut(s)	105, 159
HpySE526I	ACGT	1 cut(s)	466
Hsp92II	CATG	2 cut(s)	424, 487
HspAI	GCGC	1 cut(s)	369
Kzo9I	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
LmnI	GCTCC	2 cut(s)	47, 517
Lsp1109I	GCAGC	1 cut(s)	101
LweI	GCATC	1 cut(s)	428
MaeII	ACGT	1 cut(s)	466
MaeIII	GTNAC	1 cut(s)	154
MalI	GATC	7 cut(s)	6, 207, 254, 288, 389, 435, 478
MbiI	CCGCTC	1 cut(s)	344
MboI	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
MboII	GAAGA	2 cut(s)	247, 446
MfeI	CAATTG	1 cut(s)	377
MflI	RGATCY	2 cut(s)	4, 387
MluCI	AATT	4 cut(s)	274, 357, 377, 448
MnlI	CCTC	9 cut(s)	95, 134, 154, 157, 167, 192, 304, 440, 464
MseI	TTAA	1 cut(s)	360
MspI	CCGG	3 cut(s)	16, 54, 264
MspR9I	CCNGG	3 cut(s)	55, 70, 146
MunI	CAATTG	1 cut(s)	377
MvaI	CCWGG	2 cut(s)	70, 146
MvnI	CGCG	1 cut(s)	198
MwoI	GCNNNNNNNGC	2 cut(s)	402, 480
NciI	CCSGG	1 cut(s)	55
NdeII	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
NlaIII	CATG	2 cut(s)	424, 487
NlaIV	GGNNCC	2 cut(s)	6, 49
NmuCI	GTSAC	1 cut(s)	154
NspI	RCATGY	1 cut(s)	424
NspV	TTCGAA	1 cut(s)	272
PceI	AGGCCT	1 cut(s)	144
PcsI	WCGNNNNNNNCGW	1 cut(s)	472
PfeI	GAWTC	1 cut(s)	248
PflFI	GACNNNGTC	1 cut(s)	152
PkrI	GCNGC	2 cut(s)	91, 346
Ple19I	CGATCG	2 cut(s)	289, 436
PmaCI	CACGTG	1 cut(s)	467
PmlI	CACGTG	1 cut(s)	467
Ppu21I	YACGTR	1 cut(s)	467
PsiI	TTATAA	1 cut(s)	113
Psp6I	CCWGG	2 cut(s)	68, 144
PspCI	CACGTG	1 cut(s)	467
PspGI	CCWGG	2 cut(s)	68, 144
PspN4I	GGNNCC	2 cut(s)	6, 49
PsuI	RGATCY	2 cut(s)	4, 387
PsyI	GACNNNGTC	1 cut(s)	152
PvuI	CGATCG	2 cut(s)	289, 436
SaqAI	TTAA	1 cut(s)	360
SatI	GCNGC	2 cut(s)	90, 345
Sau3AI	GATC	7 cut(s)	4, 205, 252, 286, 387, 433, 476
ScrFI	CCNGG	3 cut(s)	55, 70, 146
SetI	ASST	8 cut(s)	33, 87, 184, 215, 315, 331, 469, 514
SfaNI	GCATC	1 cut(s)	428
SfcI	CTRYAG	1 cut(s)	136
SfuI	TTCGAA	1 cut(s)	272
SgrAI	CRCCGGYG	1 cut(s)	263
Sse9I	AATT	4 cut(s)	274, 357, 377, 448
SseBI	AGGCCT	1 cut(s)	144
SsiI	CCGC	2 cut(s)	344, 427
StuI	AGGCCT	1 cut(s)	144
StyD4I	CCNGG	3 cut(s)	53, 68, 144
TaaI	ACNGT	1 cut(s)	295
TaiI	ACGT	1 cut(s)	469
TaqI	TCGA	7 cut(s)	204, 246, 251, 272, 285, 432, 436
TasI	AATT	4 cut(s)	274, 357, 377, 448
TauI	GCSGC	1 cut(s)	347
TfiI	GAWTC	1 cut(s)	248
Tru1I	TTAA	1 cut(s)	360
Tru9I	TTAA	1 cut(s)	360
TscAI	CASTG	1 cut(s)	163
TseFI	GTSAC	1 cut(s)	154
TseI	GCWGC	1 cut(s)	89
Tsp45I	GTSAC	1 cut(s)	154
TspDTI	ATGAA	1 cut(s)	247
TspGWI	ACGGA	1 cut(s)	380
TspRI	CASTG	1 cut(s)	163
Tth111I	GACNNNGTC	1 cut(s)	152
XapI	RAATTY	2 cut(s)	274, 448
XceI	RCATGY	1 cut(s)	424
XmiI	GTMKAC	1 cut(s)	135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.