Prupe.1G198000_v2.0.a1

3beta-hydroxysteroid-dehydrogenase decarboxylase isoform

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
18980572 .. 18983305
2734 bp
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UTR
Exon/CDS
Intron
Prupe.1G198000.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 273 bp
ATGGACTTGGTTTCGACTGCTCTGCAGCTCAAAACGAGATTGGATACTCACTGGAATTTGCAGCTTCCCTCTATTGTCTCAAGTTGGTTTTGTCACACTGTGGTGATAGGTGTATCACTGGTGTTAGCTTTCATGCTGTATTCCATATACGAGCAGTATGAATCAGAAGTTGCGAAGCTTCTGTTCAATAGTATAATGCTGGTTTTTGGATTTTTTTTAGAACAAATCTACCTGCTTCTGTGCAACTATTTCTTGAAAAACATGGAATTTTGA
Functional Annotation

Protein Analysis

91

Amino Acids

10.58

Weight (kDa)

5.05

Isoelectric Point (pI)

27.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 240
AcsI RAATTY 2 cut(s) 55, 266
AdeI CACNNNGTG 1 cut(s) 100
AgsI TTSAA 2 cut(s) 187, 256
AleI CACNNNNGTG 1 cut(s) 101
AluBI AGCT 4 cut(s) 28, 64, 128, 178
AluI AGCT 4 cut(s) 28, 64, 128, 178
Alw26I GTCTC 1 cut(s) 82
ApeKI GCWGC 2 cut(s) 25, 61
ApoI RAATTY 2 cut(s) 55, 266
AsuHPI GGTGA 1 cut(s) 115
BbvI GCAGC 2 cut(s) 37, 73
BcgI CGANNNNNNTGC 2 cut(s) 4, 38
BciVI GTATCC 1 cut(s) 37
BcoDI GTCTC 1 cut(s) 82
BfmI CTRYAG 1 cut(s) 23
BfuAI ACCTGC 1 cut(s) 240
BfuI GTATCC 1 cut(s) 37
BisI GCNGC 2 cut(s) 26, 62
BlsI GCNGC 2 cut(s) 27, 63
BpuEI CTTGAG 1 cut(s) 64
Bse1I ACTGG 2 cut(s) 56, 123
BseNI ACTGG 2 cut(s) 56, 123
BseXI GCAGC 2 cut(s) 37, 73
BsmAI GTCTC 1 cut(s) 82
BspMAI CTGCAG 1 cut(s) 27
BspMI ACCTGC 1 cut(s) 240
BsrI ACTGG 2 cut(s) 56, 123
Bst4CI ACNGT 1 cut(s) 100
BstMAI GTCTC 1 cut(s) 82
BstSFI CTRYAG 1 cut(s) 23
BstV1I GCAGC 2 cut(s) 37, 73
BsuI GTATCC 1 cut(s) 37
BtsIMutI CAGTG 3 cut(s) 49, 96, 116
BveI ACCTGC 1 cut(s) 240
CviAII CATG 2 cut(s) 133, 262
CviJI RGCY 4 cut(s) 28, 64, 128, 178
CviKI_1 RGCY 4 cut(s) 28, 64, 128, 178
DraIII CACNNNGTG 1 cut(s) 100
FaeI CATG 2 cut(s) 136, 265
FaiI YATR 6 cut(s) 134, 146, 148, 159, 194, 263
FatI CATG 2 cut(s) 132, 261
Fnu4HI GCNGC 2 cut(s) 26, 62
Fsp4HI GCNGC 2 cut(s) 26, 62
GluI GCNGC 2 cut(s) 26, 62
Hin1II CATG 2 cut(s) 136, 265
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 1 cut(s) 161
HphI GGTGA 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 166
Hpy188III TCNNGA 1 cut(s) 253
HpyCH4III ACNGT 1 cut(s) 100
HpyCH4V TGCA 3 cut(s) 25, 61, 243
Hsp92II CATG 2 cut(s) 136, 265
LpnPI CCDG 4 cut(s) 37, 104, 185, 245
Lsp1109I GCAGC 2 cut(s) 37, 73
MaeIII GTNAC 1 cut(s) 92
MluCI AATT 2 cut(s) 55, 266
MnlI CCTC 1 cut(s) 79
MslI CAYNNNNRTG 1 cut(s) 101
NlaIII CATG 2 cut(s) 136, 265
NmuCI GTSAC 1 cut(s) 92
OliI CACNNNNGTG 1 cut(s) 101
PfeI GAWTC 1 cut(s) 161
PkrI GCNGC 2 cut(s) 27, 63
PstI CTGCAG 1 cut(s) 27
RseI CAYNNNNRTG 1 cut(s) 101
SatI GCNGC 2 cut(s) 26, 62
SetI ASST 6 cut(s) 30, 66, 112, 130, 180, 234
SfcI CTRYAG 1 cut(s) 23
SmiMI CAYNNNNRTG 1 cut(s) 101
SmlI CTYRAG 1 cut(s) 79
SmoI CTYRAG 1 cut(s) 79
Sse9I AATT 2 cut(s) 55, 266
TaaI ACNGT 1 cut(s) 100
TaqI TCGA 1 cut(s) 14
TasI AATT 2 cut(s) 55, 266
TfiI GAWTC 1 cut(s) 161
TscAI CASTG 3 cut(s) 56, 103, 123
TseFI GTSAC 1 cut(s) 92
TseI GCWGC 2 cut(s) 25, 61
Tsp45I GTSAC 1 cut(s) 92
TspDTI ATGAA 2 cut(s) 121, 174
TspRI CASTG 3 cut(s) 56, 103, 123
XapI RAATTY 2 cut(s) 55, 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.