Prupe.1G202900_v2.0.a1

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
20156338 .. 20160175
3838 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G202900.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 1923 bp
ATGACAAGCCTGCCTAAAAACAAAGCGCGGAATGCCACAGTTGAGTCCTCTACCGTGACTCATGAGGAGCACATCCGGGTTGAAAGGGTTGAGTCTTACGTTTCTGAAGACCAAATCTGGACTGTTGTTCATGAAAACCACTTTCCTGACCAGAACAAGCTCAGCTTTAACGTTCGCGATCTTTTATCAGTCACTGGGAACATCATTGATGATGCAGCCAATAACTCCATCGTTGATAATATTCTACAGCAGCACACTGCACCTGACATGACAATCTACGACGCCGACGACACCTTCATCTCTCCATTATACCTTCTGAAGTCCATTAGCTGCCAGATGTCATCATGTAAGGATGGTGAACAAGTTTCCCTCCCTTTAAGGACTGAAGCAATATTTAAAAAGCTAAAAACGTTTTCATGGGAAGCGAAGGCAGTGCTAACCCTAGCAGCCTTTGCTTTGGAATATGTGGAGATTTCTGGCACCTTGCCCAGCACTATGGCCAGTGTGACAAACTTACCAATGGCAATCCTTAAGCGAGTGCCGATCCTTATCAAACACGAAACCCTAAAGAAACGCAGGGCTGCGATTGCTGAGCTTAACAATTTGATCATGGAAACATATCATGTGATTGGTTACATAGTTAACCTGGACGATCTTCTACACAACAACAATCCAAATGATGTGCCTACATTGACCACTGCAGGGAGGAAAATCCCAACGGTAGTGTACTGGACAATCTTCACTATTGTAGCTTGTACGGATGAGATCAACCGTATTACCAGTGTTAAGTACAACGACGAGCCAGACAATCTACCCAATCTTTACCTGGAGAAAATCAAAGAAATCGTCAAGGAGCTTAAGGAACAGTATGACAGATGCATGAAAGAAAAAGCGGAGGCATCTAAAGAACTTGTAATCTGTGATAACATCACGAAGGTTATCAGCACCTTGATTCTTTACAACGATACTGTCAATCAGCAGCCCGTCATTAGTTGTGATTCTAATAACACCAAGATCGATGGCAATGCGTTTATCAATGAGGTGAAGGGGAAATATGTGTTGTTTTATATCTCGAGCCTGGAAAATATATCGAAAGAACTTTTGCGTCTCACAAATCTGTATAAAATAATTGATAAAGAGTATAAATGCAAGATTGTGTGGATCCCCATTGACGGTGACTGGACGACTGAAGCCGAAAAAAAAGAGTTGCAGTTTATGGAATGGAGGAAGATGATGCCGTGGTACGCAGTGCAATATTTTCCCTCAGCATCATACATGTACCTCAAGAAAGAGTGGAAAGTCAGGGAAAATTCCACAGCGGTGTTGATCAACCCCCAAGGAAAGGTTGAAAACACCAATGCGCTTACCTTGATTAAGGAATTTGGTATCGATTTCTTTGCTTTCCTGGATATTCAAATCCACACAATGCTTAAGCCAGTAGTGGAACATATTATAAGGGACGACTCCGTACTTAAACAATCGATGAAAAACCAAGGGTACAATTTCTTCATTGGAGGGAAAAACCAGAAAACGACCATTGACTTGTTCGAGAAGATAACAGAAGCAAAGGATGCAATTGAGACAGAACTGAAAATGAAGATTGGGTTAGCTCGTGTTCTAGAAAAAACGGAGACTGCCAAGACTTTCTGGGCCCGCATGAAAAACCTCTTCTTTAGCTTGGCTCGCTATAGCAAGGAGTATGAGTACGAGCAGGTGACAAAAGAAGTCCACAAGCTACTTTCTTACAAATTACACACAGACGATATGGACGGATGGATTAAGCTTACGAAAGGATGGACCGTGGTGACCTGTGGTCAGGCTAACACTATTTACACAACCCTAGAGAAATTTTCCGTCTGGAAGCAACACATAAATGATTTTGGGGATGCTTTCACGAAGTACCATGACAGTCTTATAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

641

Amino Acids

73.8

Weight (kDa)

6.13

Isoelectric Point (pI)

32.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1454, 1916
AarI CACCTGC 1 cut(s) 1702
Acc36I ACCTGC 1 cut(s) 1702
AccB1I GGYRCC 1 cut(s) 479
AccII CGCG 2 cut(s) 28, 177
AciI CCGC 4 cut(s) 28, 893, 1319, 1654
AclI AACGTT 2 cut(s) 171, 410
AclWI GGATC 3 cut(s) 538, 1156, 1169
AcoI YGGCCR 1 cut(s) 498
AcsI RAATTY 3 cut(s) 1309, 1379, 1847
AcuI CTGAAG 4 cut(s) 126, 338, 405, 1209
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 9 cut(s) 728, 757, 791, 1244, 1280, 1470, 1499, 1706, 1901
AfiI CCNNNNNNNGG 3 cut(s) 702, 1172, 1342
AflII CTTAAG 3 cut(s) 530, 857, 1430
AflIII ACRYGT 1 cut(s) 1275
AgsI TTSAA 3 cut(s) 83, 1349, 1415
AhdI GACNNNNNGTC 1 cut(s) 1812
AjnI CCWGG 4 cut(s) 645, 825, 1077, 1404
AleI CACNNNNGTG 1 cut(s) 1319
Alw21I GWGCWC 1 cut(s) 72
Alw26I GTCTC 3 cut(s) 1112, 1574, 1625
AlwI GGATC 3 cut(s) 538, 1156, 1169
AlwNI CAGNNNCTG 1 cut(s) 194
Ama87I CYCGRG 1 cut(s) 1072
AoxI GGCC 2 cut(s) 498, 1650
ApaI GGGCCC 1 cut(s) 1654
ApeKI GCWGC 6 cut(s) 215, 250, 330, 446, 581, 979
ApoI RAATTY 3 cut(s) 1309, 1379, 1847
ArsI GACNNNNNNTTYG 2 cut(s) 831, 863
AspLEI GCGC 2 cut(s) 28, 1363
AspS9I GGNCC 3 cut(s) 1650, 1651, 1797
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 5 cut(s) 368, 1054, 1187, 1726, 1816
AvaI CYCGRG 1 cut(s) 1072
AvaII GGWCC 1 cut(s) 1797
BaeGI GKGCMC 1 cut(s) 1654
BalI TGGCCA 1 cut(s) 500
BamHI GGATCC 1 cut(s) 1161
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 1 cut(s) 1654
BarI GAAGNNNNNNTAC 2 cut(s) 1490, 1522
BauI CACGAG 1 cut(s) 1611
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 72
BbvCI CCTCAGC 1 cut(s) 1264
BbvI GCAGC 6 cut(s) 227, 262, 317, 458, 568, 991
BccI CCATC 5 cut(s) 236, 347, 1013, 1767, 1788
BceAI ACGGC 1 cut(s) 1222
BcgI CGANNNNNNTGC 6 cut(s) 415, 449, 1007, 1041, 1379, 1413
BciT130I CCWGG 4 cut(s) 647, 827, 1079, 1406
BclI TGATCA 2 cut(s) 606, 1326
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 3 cut(s) 1112, 1574, 1625
BfaI CTAG 3 cut(s) 443, 1619, 1841
BfmI CTRYAG 3 cut(s) 245, 699, 1687
BfrI CTTAAG 3 cut(s) 530, 857, 1430
BfuAI ACCTGC 1 cut(s) 1702
BisI GCNGC 6 cut(s) 216, 251, 331, 447, 582, 980
BlpI GCTNAGC 2 cut(s) 161, 591
BlsI GCNGC 6 cut(s) 217, 252, 332, 448, 583, 981
Bme1390I CCNGG 5 cut(s) 77, 647, 827, 1079, 1406
Bme18I GGWCC 1 cut(s) 1797
BmeRI GACNNNNNGTC 1 cut(s) 1812
BmeT110I CYCGRG 1 cut(s) 1072
BmgT120I GGNCC 3 cut(s) 1650, 1651, 1797
BmiI GGNNCC 3 cut(s) 481, 1163, 1652
BmrFI CCNGG 5 cut(s) 77, 647, 827, 1079, 1406
BmrI ACTGGG 1 cut(s) 204
BmsI GCATC 7 cut(s) 202, 866, 908, 1224, 1277, 1561, 1876
BmuI ACTGGG 1 cut(s) 204
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 848
Bpu10I CCTNAGC 1 cut(s) 1264
Bpu1102I GCTNAGC 2 cut(s) 161, 591
BpuEI CTTGAG 1 cut(s) 1268
BpuMI CCSGG 1 cut(s) 77
Bsa29I ATCGAT 3 cut(s) 1017, 1389, 1481
BsaBI GATNNNNATC 1 cut(s) 548
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 4 cut(s) 1238, 1336, 1492, 1800
BsaXI ACNNNNNCTCC 2 cut(s) 1688, 1718
Bsc4I CCNNNNNNNGG 3 cut(s) 702, 1172, 1342
Bse1I ACTGG 6 cut(s) 199, 501, 734, 780, 1184, 1436
Bse3DI GCAATG 1 cut(s) 1030
Bse8I GATNNNNATC 1 cut(s) 548
BseBI CCWGG 4 cut(s) 647, 827, 1079, 1406
BseCI ATCGAT 3 cut(s) 1017, 1389, 1481
BseDI CCNNGG 4 cut(s) 1238, 1336, 1492, 1800
BseGI GGATG 7 cut(s) 72, 358, 766, 1576, 1778, 1799, 1891
BseJI GATNNNNATC 1 cut(s) 548
BseLI CCNNNNNNNGG 3 cut(s) 702, 1172, 1342
BseMI GCAATG 1 cut(s) 1030
BseMII CTCAG 3 cut(s) 175, 582, 1278
BseNI ACTGG 6 cut(s) 199, 501, 734, 780, 1184, 1436
BseRI GAGGAG 1 cut(s) 80
BseSI GKGCMC 1 cut(s) 1654
BseXI GCAGC 6 cut(s) 227, 262, 317, 458, 568, 991
BseYI CCCAGC 1 cut(s) 488
BsgI GTGCAG 1 cut(s) 243
Bsh1236I CGCG 2 cut(s) 28, 177
BshFI GGCC 2 cut(s) 500, 1652
BshNI GGYRCC 1 cut(s) 479
BshVI ATCGAT 3 cut(s) 1017, 1389, 1481
BsiHKAI GWGCWC 1 cut(s) 72
BsiHKCI CYCGRG 1 cut(s) 1072
BsiSI CCGG 1 cut(s) 76
BslFI GGGAC 1 cut(s) 1472
BslI CCNNNNNNNGG 3 cut(s) 702, 1172, 1342
BsmAI GTCTC 3 cut(s) 1112, 1574, 1625
BsmBI CGTCTC 1 cut(s) 1112
BsmFI GGGAC 1 cut(s) 1472
BsmI GAATGC 1 cut(s) 37
BsnI GGCC 2 cut(s) 500, 1652
BsoBI CYCGRG 1 cut(s) 1072
Bsp120I GGGCCC 1 cut(s) 1650
Bsp1286I GDGCHC 2 cut(s) 72, 1654
Bsp143I GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
Bsp1720I GCTNAGC 2 cut(s) 161, 591
Bsp68I TCGCGA 1 cut(s) 177
BspACI CCGC 4 cut(s) 28, 893, 1319, 1654
BspANI GGCC 2 cut(s) 500, 1652
BspCNI CTCAG 3 cut(s) 174, 583, 1277
BspDI ATCGAT 3 cut(s) 1017, 1389, 1481
BspFNI CGCG 2 cut(s) 28, 177
BspHI TCATGA 2 cut(s) 61, 130
BspLI GGNNCC 3 cut(s) 481, 1163, 1652
BspMAI CTGCAG 1 cut(s) 703
BspMI ACCTGC 1 cut(s) 1702
BspPI GGATC 3 cut(s) 538, 1156, 1169
BspT107I GGYRCC 1 cut(s) 479
BspTI CTTAAG 3 cut(s) 530, 857, 1430
BsrDI GCAATG 1 cut(s) 1030
BsrI ACTGG 6 cut(s) 199, 501, 734, 780, 1184, 1436
BssECI CCNNGG 4 cut(s) 1238, 1336, 1492, 1800
BssMI GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
BssNI GRCGYC 1 cut(s) 282
BssSI CACGAG 1 cut(s) 1611
BssT1I CCWWGG 2 cut(s) 1336, 1492
Bst2BI CACGAG 1 cut(s) 1611
Bst2UI CCWGG 4 cut(s) 647, 827, 1079, 1406
Bst6I CTCTTC 1 cut(s) 1673
BstACI GRCGYC 1 cut(s) 282
BstAFI CTTAAG 3 cut(s) 530, 857, 1430
BstAPI GCANNNNNTGC 2 cut(s) 452, 1571
BstC8I GCNNGC 3 cut(s) 11, 1654, 1684
BstDEI CTNAG 4 cut(s) 161, 591, 1264, 1920
BstDSI CCRYGG 2 cut(s) 1238, 1800
BstEII GGTNACC 1 cut(s) 1804
BstF5I GGATG 7 cut(s) 72, 358, 766, 1576, 1778, 1799, 1891
BstFNI CGCG 2 cut(s) 28, 177
BstHHI GCGC 2 cut(s) 28, 1363
BstKTI GATC 8 cut(s) 181, 546, 609, 655, 768, 1017, 1164, 1329
BstMAI GTCTC 3 cut(s) 1112, 1574, 1625
BstMBI GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
BstMWI GCNNNNNNNGC 5 cut(s) 32, 452, 587, 1571, 1683
BstNI CCWGG 4 cut(s) 647, 827, 1079, 1406
BstNSI RCATGY 1 cut(s) 1279
BstPI GGTNACC 1 cut(s) 1804
BstSCI CCNGG 5 cut(s) 75, 645, 825, 1077, 1404
BstSFI CTRYAG 3 cut(s) 245, 699, 1687
BstSLI GKGCMC 1 cut(s) 1654
BstUI CGCG 2 cut(s) 28, 177
BstV1I GCAGC 6 cut(s) 227, 262, 317, 458, 568, 991
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 1161
BstXI CCANNNNNNTGG 1 cut(s) 496
BstYI RGATCY 1 cut(s) 1161
Bsu15I ATCGAT 3 cut(s) 1017, 1389, 1481
BsuRI GGCC 2 cut(s) 500, 1652
BsuTUI ATCGAT 3 cut(s) 1017, 1389, 1481
BtgI CCRYGG 2 cut(s) 1238, 1800
BtsCI GGATG 7 cut(s) 72, 358, 766, 1576, 1778, 1799, 1891
BtsI GCAGTG 4 cut(s) 255, 438, 696, 1254
BtsIMutI CAGTG 7 cut(s) 192, 255, 438, 508, 696, 787, 1254
BtuMI TCGCGA 1 cut(s) 177
BveI ACCTGC 1 cut(s) 1702
Cac8I GCNNGC 3 cut(s) 11, 1654, 1684
CaiI CAGNNNCTG 1 cut(s) 194
CciI TCATGA 2 cut(s) 61, 130
CfoI GCGC 2 cut(s) 28, 1363
Cfr13I GGNCC 3 cut(s) 1650, 1651, 1797
ClaI ATCGAT 3 cut(s) 1017, 1389, 1481
CseI GACGC 2 cut(s) 290, 1094
Csp6I GTAC 9 cut(s) 727, 756, 790, 1243, 1279, 1469, 1498, 1705, 1900
CviQI GTAC 9 cut(s) 727, 756, 790, 1243, 1279, 1469, 1498, 1705, 1900
DdeI CTNAG 4 cut(s) 161, 591, 1264, 1920
DpnI GATC 8 cut(s) 180, 545, 608, 654, 767, 1016, 1163, 1328
DpnII GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
DraI TTTAAA 1 cut(s) 397
DriI GACNNNNNGTC 1 cut(s) 1812
EaeI YGGCCR 1 cut(s) 498
Eam1104I CTCTTC 1 cut(s) 1673
Eam1105I GACNNNNNGTC 1 cut(s) 1812
EarI CTCTTC 1 cut(s) 1673
Eco130I CCWWGG 2 cut(s) 1336, 1492
Eco24I GRGCYC 1 cut(s) 1654
Eco47I GGWCC 1 cut(s) 1797
Eco57I CTGAAG 4 cut(s) 126, 338, 405, 1209
Eco88I CYCGRG 1 cut(s) 1072
Eco91I GGTNACC 1 cut(s) 1804
EcoO65I GGTNACC 1 cut(s) 1804
EcoRII CCWGG 4 cut(s) 645, 825, 1077, 1404
EcoT14I CCWWGG 2 cut(s) 1336, 1492
EcoT22I ATGCAT 1 cut(s) 881
EcoT38I GRGCYC 1 cut(s) 1654
ErhI CCWWGG 2 cut(s) 1336, 1492
Esp3I CGTCTC 1 cut(s) 1112
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 1 cut(s) 1472
FauI CCCGC 1 cut(s) 1661
FbaI TGATCA 2 cut(s) 606, 1326
Fnu4HI GCNGC 6 cut(s) 216, 251, 331, 447, 582, 980
FokI GGATG 7 cut(s) 59, 365, 773, 1583, 1785, 1806, 1898
FriOI GRGCYC 1 cut(s) 1654
Fsp4HI GCNGC 6 cut(s) 216, 251, 331, 447, 582, 980
FspBI CTAG 3 cut(s) 443, 1619, 1841
GlaI GCGC 2 cut(s) 27, 1362
GluI GCNGC 6 cut(s) 216, 251, 331, 447, 582, 980
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 1 cut(s) 848
HaeIII GGCC 2 cut(s) 500, 1652
HapII CCGG 1 cut(s) 76
HgaI GACGC 2 cut(s) 290, 1094
HhaI GCGC 2 cut(s) 28, 1363
Hin1I GRCGYC 1 cut(s) 282
Hin6I GCGC 2 cut(s) 26, 1361
HinP1I GCGC 2 cut(s) 26, 1361
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 1 cut(s) 1781
HinfI GANTC 6 cut(s) 44, 58, 92, 952, 998, 1463
HpaI GTTAAC 1 cut(s) 643
HpaII CCGG 1 cut(s) 76
HphI GGTGA 5 cut(s) 368, 1054, 1187, 1726, 1816
Hpy166II GTNNAC 4 cut(s) 359, 643, 727, 1729
Hpy188I TCNGA 2 cut(s) 106, 318
Hpy8I GTNNAC 4 cut(s) 359, 643, 727, 1729
Hpy99I CGWCG 3 cut(s) 284, 290, 800
HpyAV CCTTC 5 cut(s) 304, 323, 421, 928, 1039
HpyCH4IV ACGT 3 cut(s) 99, 171, 410
HpyCH4V TGCA 8 cut(s) 215, 260, 701, 879, 1149, 1210, 1252, 1574
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 452, 587, 1571, 1683
HpyF3I CTNAG 4 cut(s) 161, 591, 1264, 1920
HpySE526I ACGT 3 cut(s) 99, 171, 410
Hsp92I GRCGYC 1 cut(s) 282
HspAI GCGC 2 cut(s) 26, 1361
Ksp22I TGATCA 2 cut(s) 606, 1326
KspAI GTTAAC 1 cut(s) 643
Kzo9I GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
LmnI GCTCC 2 cut(s) 67, 853
Lsp1109I GCAGC 6 cut(s) 227, 262, 317, 458, 568, 991
LweI GCATC 7 cut(s) 202, 866, 908, 1224, 1277, 1561, 1876
MaeI CTAG 3 cut(s) 443, 1619, 1841
MaeII ACGT 3 cut(s) 99, 171, 410
MaeIII GTNAC 7 cut(s) 55, 190, 505, 632, 1175, 1714, 1804
MalI GATC 8 cut(s) 180, 545, 608, 654, 767, 1016, 1163, 1328
MboI GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
MboII GAAGA 8 cut(s) 119, 647, 730, 1240, 1498, 1564, 1609, 1660
MfeI CAATTG 1 cut(s) 1575
MflI RGATCY 1 cut(s) 1161
MhlI GDGCHC 2 cut(s) 72, 1654
MlsI TGGCCA 1 cut(s) 500
MluCI AATT 8 cut(s) 601, 1128, 1309, 1379, 1501, 1575, 1748, 1847
MluNI TGGCCA 1 cut(s) 500
MlyI GAGTC 4 cut(s) 52, 53, 101, 1457
Mox20I TGGCCA 1 cut(s) 500
Mph1103I ATGCAT 1 cut(s) 881
MscI TGGCCA 1 cut(s) 500
MslI CAYNNNNRTG 2 cut(s) 1319, 1872
Msp20I TGGCCA 1 cut(s) 500
MspA1I CMGCKG 1 cut(s) 1319
MspCI CTTAAG 3 cut(s) 530, 857, 1430
MspI CCGG 1 cut(s) 76
MspR9I CCNGG 5 cut(s) 77, 647, 827, 1079, 1406
MunI CAATTG 1 cut(s) 1575
Mva1269I GAATGC 1 cut(s) 37
MvaI CCWGG 4 cut(s) 647, 827, 1079, 1406
MvnI CGCG 2 cut(s) 28, 177
MwoI GCNNNNNNNGC 5 cut(s) 32, 452, 587, 1571, 1683
NciI CCSGG 1 cut(s) 77
NdeII GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
NlaIV GGNNCC 3 cut(s) 481, 1163, 1652
NmuCI GTSAC 6 cut(s) 55, 190, 505, 1175, 1714, 1804
NruI TCGCGA 1 cut(s) 177
NsiI ATGCAT 1 cut(s) 881
NspI RCATGY 1 cut(s) 1279
OliI CACNNNNGTG 1 cut(s) 1319
PaeR7I CTCGAG 1 cut(s) 1072
PagI TCATGA 2 cut(s) 61, 130
PaqCI CACCTGC 1 cut(s) 1702
PciI ACATGT 1 cut(s) 1275
PcsI WCGNNNNNNNCGW 1 cut(s) 285
PctI GAATGC 1 cut(s) 37
PfeI GAWTC 2 cut(s) 952, 998
PfoI TCCNGGA 1 cut(s) 1404
PkrI GCNGC 6 cut(s) 217, 252, 332, 448, 583, 981
PleI GAGTC 4 cut(s) 52, 52, 100, 1457
PpsI GAGTC 4 cut(s) 52, 52, 100, 1457
PscI ACATGT 1 cut(s) 1275
PsiI TTATAA 2 cut(s) 1454, 1916
Psp1406I AACGTT 2 cut(s) 171, 410
Psp6I CCWGG 4 cut(s) 645, 825, 1077, 1404
PspEI GGTNACC 1 cut(s) 1804
PspFI CCCAGC 1 cut(s) 488
PspGI CCWGG 4 cut(s) 645, 825, 1077, 1404
PspN4I GGNNCC 3 cut(s) 481, 1163, 1652
PspOMI GGGCCC 1 cut(s) 1650
PspPI GGNCC 3 cut(s) 1650, 1651, 1797
PstI CTGCAG 1 cut(s) 703
PstNI CAGNNNCTG 1 cut(s) 194
PsuI RGATCY 1 cut(s) 1161
RruI TCGCGA 1 cut(s) 177
RsaI GTAC 9 cut(s) 728, 757, 791, 1244, 1280, 1470, 1499, 1706, 1901
RsaNI GTAC 9 cut(s) 727, 756, 790, 1243, 1279, 1469, 1498, 1705, 1900
RseI CAYNNNNRTG 2 cut(s) 1319, 1872
SatI GCNGC 6 cut(s) 216, 251, 331, 447, 582, 980
Sau3AI GATC 8 cut(s) 178, 543, 606, 652, 765, 1014, 1161, 1326
Sau96I GGNCC 3 cut(s) 1650, 1651, 1797
SchI GAGTC 4 cut(s) 52, 53, 101, 1457
ScrFI CCNGG 5 cut(s) 77, 647, 827, 1079, 1406
SduI GDGCHC 2 cut(s) 72, 1654
SfaNI GCATC 7 cut(s) 202, 866, 908, 1224, 1277, 1561, 1876
SfcI CTRYAG 3 cut(s) 245, 699, 1687
Sfr274I CTCGAG 1 cut(s) 1072
SinI GGWCC 1 cut(s) 1797
SlaI CTCGAG 1 cut(s) 1072
SmiMI CAYNNNNRTG 2 cut(s) 1319, 1872
SmlI CTYRAG 5 cut(s) 530, 857, 1072, 1283, 1430
SmoI CTYRAG 5 cut(s) 530, 857, 1072, 1283, 1430
Sse9I AATT 8 cut(s) 601, 1128, 1309, 1379, 1501, 1575, 1748, 1847
SsiI CCGC 4 cut(s) 28, 893, 1319, 1654
SspI AATATT 3 cut(s) 241, 393, 1256
SspMI CTAG 3 cut(s) 443, 1619, 1841
StyD4I CCNGG 5 cut(s) 75, 645, 825, 1077, 1404
StyI CCWWGG 2 cut(s) 1336, 1492
TaiI ACGT 3 cut(s) 102, 174, 413
TaqI TCGA 6 cut(s) 1017, 1073, 1091, 1389, 1481, 1548
TasI AATT 8 cut(s) 601, 1128, 1309, 1379, 1501, 1575, 1748, 1847
TatI WGTACW 2 cut(s) 726, 789
TfiI GAWTC 2 cut(s) 952, 998
TscAI CASTG 7 cut(s) 199, 262, 438, 508, 703, 787, 1254
TseFI GTSAC 6 cut(s) 55, 190, 505, 1175, 1714, 1804
TseI GCWGC 6 cut(s) 215, 250, 330, 446, 581, 979
Tsp45I GTSAC 6 cut(s) 55, 190, 505, 1175, 1714, 1804
TspDTI ATGAA 9 cut(s) 119, 147, 286, 405, 896, 1498, 1499, 1610, 1673
TspGWI ACGGA 5 cut(s) 773, 1456, 1643, 1785, 1843
TspRI CASTG 7 cut(s) 199, 262, 438, 508, 703, 787, 1254
Vha464I CTTAAG 3 cut(s) 530, 857, 1430
VpaK11BI GGWCC 1 cut(s) 1797
XapI RAATTY 3 cut(s) 1309, 1379, 1847
XbaI TCTAGA 1 cut(s) 1618
XceI RCATGY 1 cut(s) 1279
XcmI CCANNNNNNNNNTGG 1 cut(s) 823
XhoI CTCGAG 1 cut(s) 1072
XspI CTAG 3 cut(s) 443, 1619, 1841
Zsp2I ATGCAT 1 cut(s) 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.