Prupe.1G206600_v2.0.a1

Peroxiredoxin Q

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
21001649 .. 21002894
1246 bp
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UTR
Exon/CDS
Intron
Prupe.1G206600.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 483 bp
ATGACACTACCCATCTTCTCTCCTAGACACTATCCATCTTCTCAAAGCCTCCCAATTGTCTCAAGTTCATCACATTCTCAATTTTATGGCCTCAAGCTCTCCAATTCCTCCTCTTTGCCAATCCCTTCTTCTTCTTCTTCTTCTTCTAGAAAGATGTTTATTTGTGCTGCTAAGGTGGACAAGGGTAAGGTTCCACCAGCCTTCACATTGAACGATCAGGATGGAAAAACTGTGAGTCTCTCCAAGTTCAAAGGAAAGCCTGTGGCTTTTGCAAAGAAATACAAACTTCCATACACATTACTTAGCGACGAGGGTAATAAGGTGAGGAAAGAATGGGAAGTGCCATCAGATCTGTTTGGGACATTGCCTGGAAGACAGACTTATGTTCTGGACAAGAATGGGGTGGTTCAACTCATCTACAACAACCAGTTCCAACCTGAGAAGCTTATTGATGAAACTCTCAAATTCCTTCAAAGCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

161

Amino Acids

17.78

Weight (kDa)

9.66

Isoelectric Point (pI)

51.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 464
AgsI TTSAA 4 cut(s) 211, 250, 410, 473
AjnI CCWGG 1 cut(s) 367
AjuI GAANNNNNNNTTGG 2 cut(s) 112, 144
AluBI AGCT 2 cut(s) 97, 445
AluI AGCT 2 cut(s) 97, 445
Alw26I GTCTC 2 cut(s) 64, 242
AoxI GGCC 1 cut(s) 88
ApeKI GCWGC 1 cut(s) 167
ApoI RAATTY 1 cut(s) 464
AsuHPI GGTGA 1 cut(s) 334
BbsI GAAGAC 1 cut(s) 379
BbvI GCAGC 1 cut(s) 154
BccI CCATC 4 cut(s) 20, 43, 215, 352
BciT130I CCWGG 1 cut(s) 369
BcoDI GTCTC 2 cut(s) 64, 242
BfaI CTAG 2 cut(s) 24, 147
BglII AGATCT 1 cut(s) 349
BisI GCNGC 1 cut(s) 168
BlsI GCNGC 1 cut(s) 169
Bme1390I CCNGG 1 cut(s) 369
BmiI GGNNCC 1 cut(s) 192
BmrFI CCNGG 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 379
Bpu10I CCTNAGC 1 cut(s) 171
BpuEI CTTGAG 2 cut(s) 46, 77
Bse1I ACTGG 1 cut(s) 427
Bse3DI GCAATG 1 cut(s) 362
BseBI CCWGG 1 cut(s) 369
BseGI GGATG 1 cut(s) 226
BseMI GCAATG 1 cut(s) 362
BseMII CTCAG 1 cut(s) 429
BseNI ACTGG 1 cut(s) 427
BseRI GAGGAG 1 cut(s) 100
BseXI GCAGC 1 cut(s) 154
BshFI GGCC 1 cut(s) 90
BslFI GGGAC 1 cut(s) 373
BsmAI GTCTC 2 cut(s) 64, 242
BsmFI GGGAC 1 cut(s) 373
BsnI GGCC 1 cut(s) 90
Bsp143I GATC 2 cut(s) 214, 349
BspANI GGCC 1 cut(s) 90
BspCNI CTCAG 1 cut(s) 430
BspLI GGNNCC 1 cut(s) 192
BsrDI GCAATG 1 cut(s) 362
BsrI ACTGG 1 cut(s) 427
BssMI GATC 2 cut(s) 214, 349
Bst2UI CCWGG 1 cut(s) 369
Bst4CI ACNGT 1 cut(s) 232
BstDEI CTNAG 3 cut(s) 171, 302, 438
BstF5I GGATG 1 cut(s) 226
BstKTI GATC 2 cut(s) 217, 352
BstMAI GTCTC 2 cut(s) 64, 242
BstMBI GATC 2 cut(s) 214, 349
BstNI CCWGG 1 cut(s) 369
BstSCI CCNGG 1 cut(s) 367
BstV1I GCAGC 1 cut(s) 154
BstV2I GAAGAC 1 cut(s) 379
BstX2I RGATCY 1 cut(s) 349
BstYI RGATCY 1 cut(s) 349
BsuRI GGCC 1 cut(s) 90
BtsCI GGATG 1 cut(s) 226
CviJI RGCY 8 cut(s) 48, 90, 97, 200, 259, 266, 445, 477
CviKI_1 RGCY 8 cut(s) 48, 90, 97, 200, 259, 266, 445, 477
DdeI CTNAG 3 cut(s) 171, 302, 438
DpnI GATC 2 cut(s) 216, 351
DpnII GATC 2 cut(s) 214, 349
EcoRII CCWGG 1 cut(s) 367
FaiI YATR 3 cut(s) 87, 292, 384
FalI AAGNNNNNCTT 2 cut(s) 364, 396
FaqI GGGAC 1 cut(s) 373
Fnu4HI GCNGC 1 cut(s) 168
FokI GGATG 1 cut(s) 233
Fsp4HI GCNGC 1 cut(s) 168
FspBI CTAG 2 cut(s) 24, 147
GluI GCNGC 1 cut(s) 168
HaeIII GGCC 1 cut(s) 90
HindIII AAGCTT 1 cut(s) 443
HinfI GANTC 1 cut(s) 235
HphI GGTGA 1 cut(s) 334
Hpy166II GTNNAC 1 cut(s) 178
Hpy188I TCNGA 1 cut(s) 349
Hpy188III TCNNGA 3 cut(s) 147, 218, 389
Hpy8I GTNNAC 1 cut(s) 178
Hpy99I CGWCG 1 cut(s) 311
HpyAV CCTTC 3 cut(s) 135, 211, 479
HpyCH4III ACNGT 1 cut(s) 232
HpyCH4V TGCA 1 cut(s) 272
HpyF3I CTNAG 3 cut(s) 171, 302, 438
Kzo9I GATC 2 cut(s) 214, 349
LpnPI CCDG 8 cut(s) 203, 210, 273, 354, 374, 381, 440, 450
Lsp1109I GCAGC 1 cut(s) 154
MaeI CTAG 2 cut(s) 24, 147
MalI GATC 2 cut(s) 216, 351
MboI GATC 2 cut(s) 214, 349
MboII GAAGA 9 cut(s) 7, 30, 120, 123, 126, 129, 132, 135, 384
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 1 cut(s) 349
MluCI AATT 4 cut(s) 54, 80, 103, 464
MlyI GAGTC 1 cut(s) 244
MmeI TCCRAC 1 cut(s) 457
MnlI CCTC 6 cut(s) 59, 101, 118, 121, 304, 318
MseI TTAA 1 cut(s) 481
MspR9I CCNGG 1 cut(s) 369
MunI CAATTG 1 cut(s) 54
MvaI CCWGG 1 cut(s) 369
NdeII GATC 2 cut(s) 214, 349
NlaIV GGNNCC 1 cut(s) 192
PkrI GCNGC 1 cut(s) 169
PleI GAGTC 1 cut(s) 243
PpsI GAGTC 1 cut(s) 243
Psp6I CCWGG 1 cut(s) 367
PspGI CCWGG 1 cut(s) 367
PspN4I GGNNCC 1 cut(s) 192
PsuI RGATCY 1 cut(s) 349
SaqAI TTAA 1 cut(s) 481
SatI GCNGC 1 cut(s) 168
Sau3AI GATC 2 cut(s) 214, 349
SchI GAGTC 1 cut(s) 244
ScrFI CCNGG 1 cut(s) 369
SetI ASST 6 cut(s) 99, 177, 192, 324, 439, 447
SmlI CTYRAG 2 cut(s) 61, 92
SmoI CTYRAG 2 cut(s) 61, 92
Sse9I AATT 4 cut(s) 54, 80, 103, 464
SspMI CTAG 2 cut(s) 24, 147
StyD4I CCNGG 1 cut(s) 367
TaaI ACNGT 1 cut(s) 232
TasI AATT 4 cut(s) 54, 80, 103, 464
Tru1I TTAA 1 cut(s) 481
Tru9I TTAA 1 cut(s) 481
TseI GCWGC 1 cut(s) 167
TspDTI ATGAA 2 cut(s) 57, 468
XapI RAATTY 1 cut(s) 464
XbaI TCTAGA 1 cut(s) 146
XspI CTAG 2 cut(s) 24, 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.