Prupe.1G257100_v2.0.a1

EamA-like transporter family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0029162
Physical Location & Seq
Forward (+)
26727229 .. 26729207
1979 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G257100.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 1146 bp
ATGCGTACAGAGGAAGCAGGGCATAGAAGCAAGCTGTTGGGTTTAAAATCAGTAACAGTGATCATGGTGATGGTGGAGTTTTTGGATGTGGGGTTGAACATTTTGAGCAAAGCAGCTATGAAGAAAGGGATGAGTAATTTTGTCTTTGTTGTCTATGCGAATGCCCTCGCCCTCTTTGTCTTGCTTCCATCTTCCTTCTTCTTCTACAGGAGAAGAACTTATCCACCTCTCTCATGGTCCTTGATCTGTAAACTGTTCCTTGTTAGCTTTATGAGCTCTGGTGCGCAGCTGCTAAAGTTTATTGGAATAAACTACAGCTCTCCAACTATGGCCTCTGCAATGATTGATCTCATGCCAGCTTTTACCTTCATTCTTGCTGTCATCACTGGGATGGAAATTCTGGATTTGAGAATTACCAGTAGACAGGCCAAGTGCATAGGCACAGTGGTCTCAATCTCAGGGGCACTCATGCTGACCTTATATAAAGGCCTACCACTCATAAGGGCCGATGCATCACATAGTAAATTAATCAGTCTGCAGCTTCTTTTATCCTCTCAAACGAACTGGTTCATTGGAGGCATTGTGCTTGCATTTCAAAGCTTCTTGCTAGCAATGATGCATATTGCAGAGACATGGGTTATTAGGGACTACCCTGCAGTGCTGATGGTTACAACGATTCGGTGCATCTTTGTTACCATCCAATCTGCTGCAATTTCTCTGATTGCTGTCAAAGGACTAAATGCATGGAAGCTAAAGCCTGACATTGAACTCATAGCTATTGGGTACAATGCAACTTTTGAAGTAATGCTAAGGACTGGTATTCATTTGTGGGCAATGAATATAAAGGGTCCTGTTTATGTTGCCATGTTCAAGCCGCTTGGTTTAGTCATGGCACTTTTCGTTGGCGTGGCATTTCTTGGAGATACTCTTTATCTTGGAAGGTTGCTGGGAGCGGCTATAACAGTGGTAGGGTTTTATGCCGTAATTTGGGGGAAAGCCCAAGAAGAGAAGGAGAAGGCTCAAAATGATCAAACCAGAAGCTTTGAGTCATTTCCTCAATCAGAAGCAGAACCTCTTTTGCCTAAACATTGTAAACAAGGCACTGAGGAGAAAAGTCTTTTGGAAAGAGTTTTTCTTATTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EamA

Protein Analysis

382

Amino Acids

42.24

Weight (kDa)

9.52

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0029162)

Species Orthologous Gene IDs
prunus_persica Prupe.1G257100_v2.0.a1 Prupe.1G257100_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 285
AccBSI CCGCTC 1 cut(s) 953
AccI GTMKAC 1 cut(s) 421
AciI CCGC 2 cut(s) 875, 953
AcsI RAATTY 1 cut(s) 396
AfaI GTAC 2 cut(s) 7, 785
AfiI CCNNNNNNNGG 1 cut(s) 987
AgsI TTSAA 5 cut(s) 97, 596, 767, 800, 871
AjuI GAANNNNNNNTTGG 2 cut(s) 1103, 1135
Alw21I GWGCWC 1 cut(s) 278
Alw26I GTCTC 2 cut(s) 454, 623
AoxI GGCC 4 cut(s) 330, 426, 487, 504
ApeKI GCWGC 5 cut(s) 113, 286, 289, 538, 707
ApoI RAATTY 1 cut(s) 396
AseI ATTAAT 1 cut(s) 527
Asp700I GAANNNNTTC 1 cut(s) 566
AspLEI GCGC 1 cut(s) 286
AspS9I GGNCC 3 cut(s) 237, 504, 848
AsuHPI GGTGA 1 cut(s) 79
AsuNHI GCTAGC 1 cut(s) 607
AvaII GGWCC 2 cut(s) 237, 848
BaeGI GKGCMC 1 cut(s) 466
BanII GRGCYC 1 cut(s) 278
Bbv12I GWGCWC 1 cut(s) 278
BbvI GCAGC 5 cut(s) 125, 276, 298, 550, 694
BccI CCATC 5 cut(s) 64, 196, 385, 658, 704
BceAI ACGGC 1 cut(s) 965
BclI TGATCA 2 cut(s) 60, 1027
BcoDI GTCTC 2 cut(s) 454, 623
BfaI CTAG 1 cut(s) 608
BfmI CTRYAG 4 cut(s) 205, 313, 536, 654
BisI GCNGC 7 cut(s) 114, 287, 290, 539, 708, 875, 954
BlsI GCNGC 7 cut(s) 115, 288, 291, 540, 709, 876, 955
Bme18I GGWCC 2 cut(s) 237, 848
BmgT120I GGNCC 3 cut(s) 237, 504, 848
BmiI GGNNCC 1 cut(s) 849
BmrI ACTGGG 1 cut(s) 396
BmsI GCATC 4 cut(s) 499, 521, 606, 693
BmtI GCTAGC 1 cut(s) 611
BmuI ACTGGG 1 cut(s) 396
Bpu10I CCTNAGC 1 cut(s) 809
BsaI GGTCTC 1 cut(s) 454
BsaXI ACNNNNNCTCC 2 cut(s) 567, 597
Bsc4I CCNNNNNNNGG 1 cut(s) 987
Bse1I ACTGG 4 cut(s) 391, 417, 569, 820
Bse3DI GCAATG 3 cut(s) 345, 618, 840
BseGI GGATG 4 cut(s) 91, 135, 396, 696
BseLI CCNNNNNNNGG 1 cut(s) 987
BseMI GCAATG 3 cut(s) 345, 618, 840
BseMII CTCAG 2 cut(s) 471, 1095
BseNI ACTGG 4 cut(s) 391, 417, 569, 820
BseRI GAGGAG 1 cut(s) 1121
BseSI GKGCMC 1 cut(s) 466
BseXI GCAGC 5 cut(s) 125, 276, 298, 550, 694
BseYI CCCAGC 1 cut(s) 946
BshFI GGCC 4 cut(s) 332, 428, 489, 506
BsiHKAI GWGCWC 1 cut(s) 278
BslFI GGGAC 1 cut(s) 659
BslI CCNNNNNNNGG 1 cut(s) 987
BsmAI GTCTC 2 cut(s) 454, 623
BsmFI GGGAC 1 cut(s) 659
BsmI GAATGC 1 cut(s) 166
BsnI GGCC 4 cut(s) 332, 428, 489, 506
Bso31I GGTCTC 1 cut(s) 454
Bsp1286I GDGCHC 2 cut(s) 278, 466
Bsp143I GATC 4 cut(s) 60, 243, 346, 1027
BspACI CCGC 2 cut(s) 875, 953
BspANI GGCC 4 cut(s) 332, 428, 489, 506
BspCNI CTCAG 2 cut(s) 470, 1096
BspLI GGNNCC 1 cut(s) 849
BspMAI CTGCAG 2 cut(s) 540, 658
BspOI GCTAGC 1 cut(s) 611
BspTNI GGTCTC 1 cut(s) 454
BsrBI CCGCTC 1 cut(s) 953
BsrDI GCAATG 3 cut(s) 345, 618, 840
BsrI ACTGG 4 cut(s) 391, 417, 569, 820
BssMI GATC 4 cut(s) 60, 243, 346, 1027
Bst4CI ACNGT 4 cut(s) 58, 255, 445, 964
Bst6I CTCTTC 1 cut(s) 999
BstC8I GCNNGC 4 cut(s) 32, 357, 588, 609
BstDEI CTNAG 3 cut(s) 457, 809, 1104
BstF5I GGATG 4 cut(s) 91, 135, 396, 696
BstHHI GCGC 1 cut(s) 286
BstKTI GATC 4 cut(s) 63, 246, 349, 1030
BstMAI GTCTC 2 cut(s) 454, 623
BstMBI GATC 4 cut(s) 60, 243, 346, 1027
BstMWI GCNNNNNNNGC 1 cut(s) 273
BstSFI CTRYAG 4 cut(s) 205, 313, 536, 654
BstSLI GKGCMC 1 cut(s) 466
BstV1I GCAGC 5 cut(s) 125, 276, 298, 550, 694
BsuRI GGCC 4 cut(s) 332, 428, 489, 506
BtsCI GGATG 4 cut(s) 91, 135, 396, 696
BtsI GCAGTG 1 cut(s) 663
BtsIMutI CAGTG 6 cut(s) 63, 384, 450, 663, 969, 1101
Cac8I GCNNGC 4 cut(s) 32, 357, 588, 609
CfoI GCGC 1 cut(s) 286
Cfr13I GGNCC 3 cut(s) 237, 504, 848
Csp6I GTAC 2 cut(s) 6, 784
CviAII CATG 8 cut(s) 64, 234, 352, 469, 633, 744, 865, 889
CviQI GTAC 2 cut(s) 6, 784
DdeI CTNAG 3 cut(s) 457, 809, 1104
DpnI GATC 4 cut(s) 62, 245, 348, 1029
DpnII GATC 4 cut(s) 60, 243, 346, 1027
DraI TTTAAA 1 cut(s) 45
Eam1104I CTCTTC 1 cut(s) 999
EarI CTCTTC 1 cut(s) 999
Ecl136II GAGCTC 1 cut(s) 276
Eco147I AGGCCT 1 cut(s) 489
Eco24I GRGCYC 1 cut(s) 278
Eco31I GGTCTC 1 cut(s) 454
Eco47I GGWCC 2 cut(s) 237, 848
Eco53kI GAGCTC 1 cut(s) 276
EcoICRI GAGCTC 1 cut(s) 276
EcoO109I RGGNCCY 1 cut(s) 848
EcoT22I ATGCAT 3 cut(s) 514, 621, 745
EcoT38I GRGCYC 1 cut(s) 278
FaeI CATG 8 cut(s) 67, 237, 355, 472, 636, 747, 868, 892
FaqI GGGAC 1 cut(s) 659
FatI CATG 8 cut(s) 63, 233, 351, 468, 632, 743, 864, 888
FbaI TGATCA 2 cut(s) 60, 1027
FblI GTMKAC 1 cut(s) 421
Fnu4HI GCNGC 7 cut(s) 114, 287, 290, 539, 708, 875, 954
FokI GGATG 4 cut(s) 98, 142, 403, 683
FriOI GRGCYC 1 cut(s) 278
Fsp4HI GCNGC 7 cut(s) 114, 287, 290, 539, 708, 875, 954
FspBI CTAG 1 cut(s) 608
FspI TGCGCA 1 cut(s) 285
GlaI GCGC 1 cut(s) 285
GluI GCNGC 7 cut(s) 114, 287, 290, 539, 708, 875, 954
GsaI CCCAGC 1 cut(s) 950
HaeIII GGCC 4 cut(s) 332, 428, 489, 506
HhaI GCGC 1 cut(s) 286
Hin1II CATG 8 cut(s) 67, 237, 355, 472, 636, 747, 868, 892
Hin6I GCGC 1 cut(s) 284
HinP1I GCGC 1 cut(s) 284
HindIII AAGCTT 2 cut(s) 598, 1039
HinfI GANTC 2 cut(s) 676, 1046
HphI GGTGA 1 cut(s) 79
Hpy166II GTNNAC 3 cut(s) 251, 422, 1094
Hpy188I TCNGA 2 cut(s) 720, 1063
Hpy188III TCNNGA 1 cut(s) 401
Hpy8I GTNNAC 3 cut(s) 251, 422, 1094
HpyAV CCTTC 5 cut(s) 205, 376, 933, 1003, 1009
HpyCH4III ACNGT 4 cut(s) 58, 255, 445, 964
HpyF10VI GCNNNNNNNGC 1 cut(s) 273
HpyF3I CTNAG 3 cut(s) 457, 809, 1104
Hsp92II CATG 8 cut(s) 67, 237, 355, 472, 636, 747, 868, 892
HspAI GCGC 1 cut(s) 284
Ksp22I TGATCA 2 cut(s) 60, 1027
Kzo9I GATC 4 cut(s) 60, 243, 346, 1027
LmnI GCTCC 1 cut(s) 950
Lsp1109I GCAGC 5 cut(s) 125, 276, 298, 550, 694
LweI GCATC 4 cut(s) 499, 521, 606, 693
MaeI CTAG 1 cut(s) 608
MaeIII GTNAC 3 cut(s) 52, 667, 691
MalI GATC 4 cut(s) 62, 245, 348, 1029
MbiI CCGCTC 1 cut(s) 953
MboI GATC 4 cut(s) 60, 243, 346, 1027
MboII GAAGA 6 cut(s) 133, 183, 190, 193, 225, 1016
MhlI GDGCHC 2 cut(s) 278, 466
MluCI AATT 6 cut(s) 136, 396, 411, 524, 711, 984
MlyI GAGTC 1 cut(s) 1055
MmeI TCCRAC 1 cut(s) 347
Mph1103I ATGCAT 3 cut(s) 514, 621, 745
MroXI GAANNNNTTC 1 cut(s) 566
MseI TTAA 3 cut(s) 44, 527, 1140
MslI CAYNNNNRTG 2 cut(s) 68, 389
MspA1I CMGCKG 1 cut(s) 289
Mva1269I GAATGC 1 cut(s) 166
MwoI GCNNNNNNNGC 1 cut(s) 273
NdeII GATC 4 cut(s) 60, 243, 346, 1027
NheI GCTAGC 1 cut(s) 607
NlaIII CATG 8 cut(s) 67, 237, 355, 472, 636, 747, 868, 892
NlaIV GGNNCC 1 cut(s) 849
NsbI TGCGCA 1 cut(s) 285
NsiI ATGCAT 3 cut(s) 514, 621, 745
PceI AGGCCT 1 cut(s) 489
PctI GAATGC 1 cut(s) 166
PdmI GAANNNNTTC 1 cut(s) 566
PfeI GAWTC 1 cut(s) 676
PkrI GCNGC 7 cut(s) 115, 288, 291, 540, 709, 876, 955
PleI GAGTC 1 cut(s) 1054
PpsI GAGTC 1 cut(s) 1054
PpuMI RGGWCCY 1 cut(s) 848
PshBI ATTAAT 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 278
Psp5II RGGWCCY 1 cut(s) 848
PspFI CCCAGC 1 cut(s) 946
PspN4I GGNNCC 1 cut(s) 849
PspPI GGNCC 3 cut(s) 237, 504, 848
PspPPI RGGWCCY 1 cut(s) 848
PstI CTGCAG 2 cut(s) 540, 658
PvuII CAGCTG 1 cut(s) 289
RsaI GTAC 2 cut(s) 7, 785
RsaNI GTAC 2 cut(s) 6, 784
RseI CAYNNNNRTG 2 cut(s) 68, 389
SacI GAGCTC 1 cut(s) 278
SaqAI TTAA 3 cut(s) 44, 527, 1140
SatI GCNGC 7 cut(s) 114, 287, 290, 539, 708, 875, 954
Sau3AI GATC 4 cut(s) 60, 243, 346, 1027
Sau96I GGNCC 3 cut(s) 237, 504, 848
SchI GAGTC 1 cut(s) 1055
SduI GDGCHC 2 cut(s) 278, 466
SfaNI GCATC 4 cut(s) 499, 521, 606, 693
SfcI CTRYAG 4 cut(s) 205, 313, 536, 654
SinI GGWCC 2 cut(s) 237, 848
SmiMI CAYNNNNRTG 2 cut(s) 68, 389
Sse9I AATT 6 cut(s) 136, 396, 411, 524, 711, 984
SseBI AGGCCT 1 cut(s) 489
SsiI CCGC 2 cut(s) 875, 953
SspMI CTAG 1 cut(s) 608
SstI GAGCTC 1 cut(s) 278
StuI AGGCCT 1 cut(s) 489
TaaI ACNGT 4 cut(s) 58, 255, 445, 964
TasI AATT 6 cut(s) 136, 396, 411, 524, 711, 984
TauI GCSGC 2 cut(s) 877, 956
TfiI GAWTC 1 cut(s) 676
Tru1I TTAA 3 cut(s) 44, 527, 1140
Tru9I TTAA 3 cut(s) 44, 527, 1140
TscAI CASTG 6 cut(s) 63, 391, 450, 663, 969, 1108
TseI GCWGC 5 cut(s) 113, 286, 289, 538, 707
TspDTI ATGAA 5 cut(s) 134, 358, 559, 812, 851
TspRI CASTG 6 cut(s) 63, 391, 450, 663, 969, 1108
VpaK11BI GGWCC 2 cut(s) 237, 848
VspI ATTAAT 1 cut(s) 527
XapI RAATTY 1 cut(s) 396
XcmI CCANNNNNNNNNTGG 1 cut(s) 231
XmiI GTMKAC 1 cut(s) 421
XmnI GAANNNNTTC 1 cut(s) 566
XspI CTAG 1 cut(s) 608
Zsp2I ATGCAT 3 cut(s) 514, 621, 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.