Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

27332436 .. 27333128

Gene Structure 693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G264800.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 297 bp

ATGACTCATTCGCTTATCAGTCTGTTGCATTTTCTTGTAGTGGTTTCCGTCCATGAGAGGCATTGCTGCTCCTCAGGGAGAGGAGGCGAAGAAGGCGGCAATCAAGCAAGTGGCCCGGTGCTGTTGGAGGAAGCGTTTGAGAAGACTAGCAAAGGAAAGGACTTTTTCAGTGGAGACAAAATTGGGTATCTTGACATTGCATTTGGGTGCTTCTTGGGGTGGCTAAGAGTGACAGAGAAGATGAATGGCGTCAAACTGCTGGACGAAACAAAGACACCAGGGCTGCCCAAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009314 GO:0009404 GO:0009407 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009636 GO:0009639 GO:0009640 GO:0009651 GO:0009704 GO:0009719 GO:0009725 GO:0009791 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010243 GO:0016740 GO:0016765 GO:0019748 GO:0022622 GO:0032501 GO:0032502 GO:0034641 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043434 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051186 GO:0060416 GO:0065007 GO:0071704 GO:0080134 GO:0080148 GO:0080167 GO:0090696 GO:0098754 GO:0099402 GO:1901564 GO:1901652 GO:1901698 GO:1901700 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_C_3 GST_N GST_N_3

Protein Analysis

99

Amino Acids

10.65

Weight (kDa)

6.4

Isoelectric Point (pI)

22.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	96
AcyI	GRCGYC	1 cut(s)	249
AjnI	CCWGG	1 cut(s)	277
Alw26I	GTCTC	1 cut(s)	168
AoxI	GGCC	1 cut(s)	112
ApeKI	GCWGC	2 cut(s)	66, 283
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
AspS9I	GGNCC	1 cut(s)	113
AsuC2I	CCSGG	1 cut(s)	116
AxyI	CCTNAGG	1 cut(s)	73
BbsI	GAAGAC	1 cut(s)	149
BbvI	GCAGC	2 cut(s)	53, 270
BciT130I	CCWGG	1 cut(s)	279
BcnI	CCSGG	1 cut(s)	116
BcoDI	GTCTC	1 cut(s)	168
BfaI	CTAG	1 cut(s)	147
BisI	GCNGC	3 cut(s)	67, 97, 284
BlsI	GCNGC	3 cut(s)	68, 98, 285
Bme1390I	CCNGG	2 cut(s)	116, 279
BmgT120I	GGNCC	1 cut(s)	113
BmrFI	CCNGG	2 cut(s)	116, 279
BpiI	GAAGAC	1 cut(s)	149
BpuMI	CCSGG	1 cut(s)	116
BsaHI	GRCGYC	1 cut(s)	249
BsaJI	CCNNGG	1 cut(s)	278
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bse21I	CCTNAGG	1 cut(s)	73
Bse3DI	GCAATG	2 cut(s)	61, 195
BseBI	CCWGG	1 cut(s)	279
BseDI	CCNNGG	1 cut(s)	278
BseMI	GCAATG	2 cut(s)	61, 195
BseMII	CTCAG	1 cut(s)	87
BseRI	GAGGAG	2 cut(s)	61, 96
BseXI	GCAGC	2 cut(s)	53, 270
BshFI	GGCC	1 cut(s)	114
BsiSI	CCGG	1 cut(s)	116
BsmAI	GTCTC	1 cut(s)	168
BsnI	GGCC	1 cut(s)	114
BspACI	CCGC	1 cut(s)	96
BspANI	GGCC	1 cut(s)	114
BspCNI	CTCAG	1 cut(s)	86
BsrDI	GCAATG	2 cut(s)	61, 195
BssECI	CCNNGG	1 cut(s)	278
BssNI	GRCGYC	1 cut(s)	249
Bst2UI	CCWGG	1 cut(s)	279
BstACI	GRCGYC	1 cut(s)	249
BstDEI	CTNAG	2 cut(s)	73, 224
BstMAI	GTCTC	1 cut(s)	168
BstMWI	GCNNNNNNNGC	1 cut(s)	93
BstNI	CCWGG	1 cut(s)	279
BstSCI	CCNGG	2 cut(s)	114, 277
BstV1I	GCAGC	2 cut(s)	53, 270
BstV2I	GAAGAC	1 cut(s)	149
Bsu36I	CCTNAGG	1 cut(s)	73
BsuRI	GGCC	1 cut(s)	114
BtsIMutI	CAGTG	1 cut(s)	175
Cfr13I	GGNCC	1 cut(s)	113
CseI	GACGC	1 cut(s)	238
CviAII	CATG	1 cut(s)	53
CviJI	RGCY	3 cut(s)	114, 223, 283
CviKI_1	RGCY	3 cut(s)	114, 223, 283
DdeI	CTNAG	2 cut(s)	73, 224
Eco81I	CCTNAGG	1 cut(s)	73
EcoRII	CCWGG	1 cut(s)	277
FaeI	CATG	1 cut(s)	56
FaiI	YATR	1 cut(s)	54
FatI	CATG	1 cut(s)	52
Fnu4HI	GCNGC	3 cut(s)	67, 97, 284
Fsp4HI	GCNGC	3 cut(s)	67, 97, 284
FspBI	CTAG	1 cut(s)	147
GluI	GCNGC	3 cut(s)	67, 97, 284
HaeIII	GGCC	1 cut(s)	114
HapII	CCGG	1 cut(s)	116
HgaI	GACGC	1 cut(s)	238
Hin1I	GRCGYC	1 cut(s)	249
Hin1II	CATG	1 cut(s)	56
HinfI	GANTC	1 cut(s)	4
HpaII	CCGG	1 cut(s)	116
Hpy188III	TCNNGA	1 cut(s)	191
HpyAV	CCTTC	1 cut(s)	86
HpyCH4V	TGCA	2 cut(s)	28, 200
HpyF10VI	GCNNNNNNNGC	1 cut(s)	93
HpyF3I	CTNAG	2 cut(s)	73, 224
Hsp92I	GRCGYC	1 cut(s)	249
Hsp92II	CATG	1 cut(s)	56
LmnI	GCTCC	1 cut(s)	74
LpnPI	CCDG	5 cut(s)	60, 129, 245, 264, 291
Lsp1109I	GCAGC	2 cut(s)	53, 270
MaeI	CTAG	1 cut(s)	147
MaeIII	GTNAC	1 cut(s)	229
MboII	GAAGA	3 cut(s)	101, 154, 250
MluCI	AATT	1 cut(s)	180
MmeI	TCCRAC	1 cut(s)	105
MnlI	CCTC	5 cut(s)	51, 74, 77, 82, 121
MslI	CAYNNNNRTG	1 cut(s)	205
MspI	CCGG	1 cut(s)	116
MspR9I	CCNGG	2 cut(s)	116, 279
MvaI	CCWGG	1 cut(s)	279
MwoI	GCNNNNNNNGC	1 cut(s)	93
NciI	CCSGG	1 cut(s)	116
NlaIII	CATG	1 cut(s)	56
NmuCI	GTSAC	1 cut(s)	229
PkrI	GCNGC	3 cut(s)	68, 98, 285
Psp6I	CCWGG	1 cut(s)	277
PspGI	CCWGG	1 cut(s)	277
PspPI	GGNCC	1 cut(s)	113
RseI	CAYNNNNRTG	1 cut(s)	205
SatI	GCNGC	3 cut(s)	67, 97, 284
Sau96I	GGNCC	1 cut(s)	113
ScrFI	CCNGG	2 cut(s)	116, 279
SmiMI	CAYNNNNRTG	1 cut(s)	205
Sse9I	AATT	1 cut(s)	180
SsiI	CCGC	1 cut(s)	96
SspMI	CTAG	1 cut(s)	147
StyD4I	CCNGG	2 cut(s)	114, 277
TasI	AATT	1 cut(s)	180
TauI	GCSGC	1 cut(s)	99
TscAI	CASTG	1 cut(s)	175
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	2 cut(s)	66, 283
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	1 cut(s)	257
TspGWI	ACGGA	1 cut(s)	37
TspRI	CASTG	1 cut(s)	175
XspI	CTAG	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.