Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

28741234 .. 28742800

Gene Structure 1567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G287400.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGTCTGATAACCAAACAGAGCACATGAGCGACCACCTCTCGGAGCAGACCTCAATTTTTGGTCTTCGTTTGTGGATCGTTCTTGGGGTTTGCGTTGGAGCTGCTTTTGTGCTCGTTTTGTTTGTCATTTCCCTCTGGTTGGCCTCCAAGCGATCCAAGAACAAAACTTTACAAAAACCCACAATCCCAATTGTCTCCAAAGAGATCCAGGAGATCAGAGTCGACCATGTTCGGACCCAAGTCCAAGCTTACCCATATCCTGAACCCGACCCAATTCCCAGAATCGAAAGGCAAGCCTTGCTGACGCCTACAGAGGATGAGAGCCCAGCTAGGTACCAGAAAGTTCACATTGAAACCCAGATCGCCTCAACGCTCTCTCTCTCTCTCTCTCTCTGTCAGCCACAACTACAGAACCAAAAACATCTTGAGGCCACAAAGGCCTTTCATGTCCAAGAAACTCCCATTCCTTTGCTGAGAGTTAAGTCTCTTGGTGTTGAGAGTAATGGTAAAACCCAACAGTTATGTGCTTCTGCACAAGCCAAGAAAGAGGTTGCTTCTGTTCTTCAATCACCAAAGCCAGTCCTGGAGAAGAAGACTCAGGTCTCTGAGCATGCTAGTGCTCCTGCTGCCAAGGCACAGGTGGTAGGATGGCCCCCGATTCGATCATTTCGGAAAAACTCCATGGCCTCTAATTTGGCAAAGAACAATGATGATGCTGAGGGCAAACAAGGGTCTGGGTGCCTTTGGGATGCTGAAACGATGGTGCTCCTTATCTGGACAGACCCATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

264

Amino Acids

29.24

Weight (kDa)

8.61

Isoelectric Point (pI)

47.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	333
AccB1I	GGYRCC	2 cut(s)	333, 738
AccI	GTMKAC	1 cut(s)	222
AclWI	GGATC	3 cut(s)	83, 147, 199
AcyI	GRCGYC	1 cut(s)	305
AfaI	GTAC	1 cut(s)	335
AfiI	CCNNNNNNNGG	2 cut(s)	40, 139
AgsI	TTSAA	2 cut(s)	353, 566
AjnI	CCWGG	2 cut(s)	207, 582
AluBI	AGCT	3 cut(s)	101, 248, 329
AluI	AGCT	3 cut(s)	101, 248, 329
Alw21I	GWGCWC	4 cut(s)	24, 114, 622, 768
Alw26I	GTCTC	3 cut(s)	199, 489, 607
AlwI	GGATC	3 cut(s)	83, 147, 199
AoxI	GGCC	5 cut(s)	141, 429, 438, 650, 684
ApeKI	GCWGC	2 cut(s)	101, 626
Asp718I	GGTACC	1 cut(s)	333
AspS9I	GGNCC	2 cut(s)	234, 651
AsuHPI	GGTGA	1 cut(s)	561
AvaII	GGWCC	1 cut(s)	234
BanI	GGYRCC	2 cut(s)	333, 738
BanII	GRGCYC	1 cut(s)	326
BbsI	GAAGAC	2 cut(s)	56, 599
Bbv12I	GWGCWC	4 cut(s)	24, 114, 622, 768
BbvCI	CCTCAGC	1 cut(s)	717
BbvI	GCAGC	2 cut(s)	88, 613
BccI	CCATC	2 cut(s)	642, 754
BciT130I	CCWGG	2 cut(s)	209, 584
BcoDI	GTCTC	3 cut(s)	199, 489, 607
BfaI	CTAG	2 cut(s)	330, 615
BfmI	CTRYAG	2 cut(s)	309, 407
BglI	GCCNNNNNGGC	1 cut(s)	437
BisI	GCNGC	2 cut(s)	102, 627
BlsI	GCNGC	2 cut(s)	103, 628
Bme1390I	CCNGG	2 cut(s)	209, 584
Bme18I	GGWCC	1 cut(s)	234
BmgT120I	GGNCC	2 cut(s)	234, 651
BmiI	GGNNCC	4 cut(s)	236, 335, 653, 740
BmrFI	CCNGG	2 cut(s)	209, 584
BmsI	GCATC	2 cut(s)	703, 739
BoxI	GACNNNNGTC	2 cut(s)	239, 599
BpiI	GAAGAC	2 cut(s)	56, 599
BplI	GAGNNNNNCTC	2 cut(s)	35, 67
BpmI	CTGGAG	1 cut(s)	605
Bpu10I	CCTNAGC	1 cut(s)	717
BpuEI	CTTGAG	1 cut(s)	446
BsaHI	GRCGYC	1 cut(s)	305
BsaI	GGTCTC	1 cut(s)	607
BsaJI	CCNNGG	3 cut(s)	630, 681, 785
Bsc4I	CCNNNNNNNGG	2 cut(s)	40, 139
Bse1I	ACTGG	1 cut(s)	578
BseBI	CCWGG	2 cut(s)	209, 584
BseDI	CCNNGG	3 cut(s)	630, 681, 785
BseGI	GGATG	3 cut(s)	322, 653, 754
BseLI	CCNNNNNNNGG	2 cut(s)	40, 139
BseMII	CTCAG	4 cut(s)	464, 597, 611, 708
BseNI	ACTGG	1 cut(s)	578
BseXI	GCAGC	2 cut(s)	88, 613
BseYI	CCCAGC	1 cut(s)	325
BsgI	GTGCAG	1 cut(s)	516
BshFI	GGCC	5 cut(s)	143, 431, 440, 652, 686
BshNI	GGYRCC	2 cut(s)	333, 738
BsiHKAI	GWGCWC	4 cut(s)	24, 114, 622, 768
BslI	CCNNNNNNNGG	2 cut(s)	40, 139
BsmAI	GTCTC	3 cut(s)	199, 489, 607
BsnI	GGCC	5 cut(s)	143, 431, 440, 652, 686
Bso31I	GGTCTC	1 cut(s)	607
Bsp1286I	GDGCHC	5 cut(s)	24, 114, 326, 622, 768
Bsp143I	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
Bsp19I	CCATGG	2 cut(s)	681, 785
BspANI	GGCC	5 cut(s)	143, 431, 440, 652, 686
BspCNI	CTCAG	4 cut(s)	465, 598, 610, 709
BspLI	GGNNCC	4 cut(s)	236, 335, 653, 740
BspPI	GGATC	3 cut(s)	83, 147, 199
BspT107I	GGYRCC	2 cut(s)	333, 738
BspTNI	GGTCTC	1 cut(s)	607
BsrI	ACTGG	1 cut(s)	578
BssECI	CCNNGG	3 cut(s)	630, 681, 785
BssMI	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
BssNI	GRCGYC	1 cut(s)	305
BssT1I	CCWWGG	3 cut(s)	630, 681, 785
Bst2UI	CCWGG	2 cut(s)	209, 584
Bst4CI	ACNGT	1 cut(s)	519
BstACI	GRCGYC	1 cut(s)	305
BstAPI	GCANNNNNTGC	1 cut(s)	298
BstC8I	GCNNGC	2 cut(s)	294, 612
BstDEI	CTNAG	4 cut(s)	473, 597, 606, 717
BstDSI	CCRYGG	2 cut(s)	681, 785
BstF5I	GGATG	3 cut(s)	322, 653, 754
BstKTI	GATC	6 cut(s)	78, 155, 207, 216, 363, 665
BstMAI	GTCTC	3 cut(s)	199, 489, 607
BstMBI	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
BstMWI	GCNNNNNNNGC	4 cut(s)	298, 437, 626, 632
BstNI	CCWGG	2 cut(s)	209, 584
BstNSI	RCATGY	1 cut(s)	614
BstPAI	GACNNNNGTC	2 cut(s)	239, 599
BstSCI	CCNGG	2 cut(s)	207, 582
BstSFI	CTRYAG	2 cut(s)	309, 407
BstV1I	GCAGC	2 cut(s)	88, 613
BstV2I	GAAGAC	2 cut(s)	56, 599
BstX2I	RGATCY	1 cut(s)	204
BstYI	RGATCY	1 cut(s)	204
BsuRI	GGCC	5 cut(s)	143, 431, 440, 652, 686
BtgI	CCRYGG	2 cut(s)	681, 785
BtsCI	GGATG	3 cut(s)	322, 653, 754
Cac8I	GCNNGC	2 cut(s)	294, 612
Cfr13I	GGNCC	2 cut(s)	234, 651
CseI	GACGC	1 cut(s)	313
Csp6I	GTAC	1 cut(s)	334
CviAII	CATG	6 cut(s)	25, 227, 446, 611, 682, 786
CviQI	GTAC	1 cut(s)	334
DdeI	CTNAG	4 cut(s)	473, 597, 606, 717
DpnI	GATC	6 cut(s)	77, 154, 206, 215, 362, 664
DpnII	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
Eco130I	CCWWGG	3 cut(s)	630, 681, 785
Eco147I	AGGCCT	1 cut(s)	440
Eco24I	GRGCYC	1 cut(s)	326
Eco31I	GGTCTC	1 cut(s)	607
Eco47I	GGWCC	1 cut(s)	234
EcoRII	CCWGG	2 cut(s)	207, 582
EcoT14I	CCWWGG	3 cut(s)	630, 681, 785
EcoT38I	GRGCYC	1 cut(s)	326
ErhI	CCWWGG	3 cut(s)	630, 681, 785
FaeI	CATG	6 cut(s)	28, 230, 449, 614, 685, 789
FaiI	YATR	8 cut(s)	26, 228, 256, 447, 523, 612, 683, 787
FatI	CATG	6 cut(s)	24, 226, 445, 610, 681, 785
FblI	GTMKAC	1 cut(s)	222
Fnu4HI	GCNGC	2 cut(s)	102, 627
FokI	GGATG	3 cut(s)	329, 660, 761
FriOI	GRGCYC	1 cut(s)	326
Fsp4HI	GCNGC	2 cut(s)	102, 627
FspBI	CTAG	2 cut(s)	330, 615
GluI	GCNGC	2 cut(s)	102, 627
GsaI	CCCAGC	1 cut(s)	329
GsuI	CTGGAG	1 cut(s)	605
HaeIII	GGCC	5 cut(s)	143, 431, 440, 652, 686
HgaI	GACGC	1 cut(s)	313
Hin1I	GRCGYC	1 cut(s)	305
Hin1II	CATG	6 cut(s)	28, 230, 449, 614, 685, 789
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HindIII	AAGCTT	1 cut(s)	246
HinfI	GANTC	4 cut(s)	219, 282, 595, 658
HphI	GGTGA	1 cut(s)	561
Hpy166II	GTNNAC	2 cut(s)	223, 346
Hpy188I	TCNGA	6 cut(s)	7, 43, 218, 234, 607, 672
Hpy188III	TCNNGA	3 cut(s)	260, 425, 775
Hpy8I	GTNNAC	2 cut(s)	223, 346
HpyCH4III	ACNGT	1 cut(s)	519
HpyCH4V	TGCA	1 cut(s)	533
HpyF10VI	GCNNNNNNNGC	4 cut(s)	298, 437, 626, 632
HpyF3I	CTNAG	4 cut(s)	473, 597, 606, 717
Hsp92I	GRCGYC	1 cut(s)	305
Hsp92II	CATG	6 cut(s)	28, 230, 449, 614, 685, 789
KpnI	GGTACC	1 cut(s)	337
Kzo9I	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
LmnI	GCTCC	4 cut(s)	43, 98, 625, 771
Lsp1109I	GCAGC	2 cut(s)	88, 613
LweI	GCATC	2 cut(s)	703, 739
MaeI	CTAG	2 cut(s)	330, 615
MalI	GATC	6 cut(s)	77, 154, 206, 215, 362, 664
MboI	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
MboII	GAAGA	4 cut(s)	56, 554, 601, 604
MfeI	CAATTG	1 cut(s)	189
MflI	RGATCY	1 cut(s)	204
MhlI	GDGCHC	5 cut(s)	24, 114, 326, 622, 768
MluCI	AATT	4 cut(s)	54, 189, 273, 691
MlyI	GAGTC	2 cut(s)	228, 589
MmeI	TCCRAC	1 cut(s)	76
MseI	TTAA	1 cut(s)	480
MslI	CAYNNNNRTG	1 cut(s)	615
MspR9I	CCNGG	2 cut(s)	209, 584
MunI	CAATTG	1 cut(s)	189
MvaI	CCWGG	2 cut(s)	209, 584
MwoI	GCNNNNNNNGC	4 cut(s)	298, 437, 626, 632
NcoI	CCATGG	2 cut(s)	681, 785
NdeII	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
NlaIII	CATG	6 cut(s)	28, 230, 449, 614, 685, 789
NlaIV	GGNNCC	4 cut(s)	236, 335, 653, 740
NspI	RCATGY	1 cut(s)	614
PaeI	GCATGC	1 cut(s)	614
PceI	AGGCCT	1 cut(s)	440
PfeI	GAWTC	2 cut(s)	282, 658
PfoI	TCCNGGA	2 cut(s)	207, 582
PkrI	GCNGC	2 cut(s)	103, 628
PleI	GAGTC	2 cut(s)	227, 589
PpsI	GAGTC	2 cut(s)	227, 589
PshAI	GACNNNNGTC	2 cut(s)	239, 599
Psp6I	CCWGG	2 cut(s)	207, 582
PspFI	CCCAGC	1 cut(s)	325
PspGI	CCWGG	2 cut(s)	207, 582
PspN4I	GGNNCC	4 cut(s)	236, 335, 653, 740
PspPI	GGNCC	2 cut(s)	234, 651
PsuI	RGATCY	1 cut(s)	204
RsaI	GTAC	1 cut(s)	335
RsaNI	GTAC	1 cut(s)	334
RseI	CAYNNNNRTG	1 cut(s)	615
SalI	GTCGAC	1 cut(s)	221
SaqAI	TTAA	1 cut(s)	480
SatI	GCNGC	2 cut(s)	102, 627
Sau3AI	GATC	6 cut(s)	75, 152, 204, 213, 360, 662
Sau96I	GGNCC	2 cut(s)	234, 651
SchI	GAGTC	2 cut(s)	228, 589
ScrFI	CCNGG	2 cut(s)	209, 584
SduI	GDGCHC	5 cut(s)	24, 114, 326, 622, 768
SetI	ASST	9 cut(s)	39, 53, 103, 250, 331, 335, 552, 603, 642
SfaNI	GCATC	2 cut(s)	703, 739
SfcI	CTRYAG	2 cut(s)	309, 407
SfiI	GGCCNNNNNGGCC	1 cut(s)	437
SinI	GGWCC	1 cut(s)	234
SmiMI	CAYNNNNRTG	1 cut(s)	615
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
SphI	GCATGC	1 cut(s)	614
Sse9I	AATT	4 cut(s)	54, 189, 273, 691
SseBI	AGGCCT	1 cut(s)	440
SspMI	CTAG	2 cut(s)	330, 615
StuI	AGGCCT	1 cut(s)	440
StyD4I	CCNGG	2 cut(s)	207, 582
StyI	CCWWGG	3 cut(s)	630, 681, 785
TaaI	ACNGT	1 cut(s)	519
TaqI	TCGA	3 cut(s)	222, 285, 661
TasI	AATT	4 cut(s)	54, 189, 273, 691
TfiI	GAWTC	2 cut(s)	282, 658
Tru1I	TTAA	1 cut(s)	480
Tru9I	TTAA	1 cut(s)	480
TseI	GCWGC	2 cut(s)	101, 626
TspDTI	ATGAA	1 cut(s)	434
VpaK11BI	GGWCC	1 cut(s)	234
XceI	RCATGY	1 cut(s)	614
XcmI	CCANNNNNNNNNTGG	1 cut(s)	637
XmiI	GTMKAC	1 cut(s)	222
XspI	CTAG	2 cut(s)	330, 615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.