Prupe.1G321200_v2.0.a1
ERF Family

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
30779961 .. 30781904
1944 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G321200.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 1071 bp
ATGGATGCAGTGAATGAAGGAACTGGACCACAAAGCTACACCCAGAACTCCTCCTATCAGAGGGGAGCTTTGGAAGCTGCTCAAGAAATTATCAAAGAGGAAATAGCTGAGAAGCTTGACATCAAACAACTAATTGCTTCCGATTCTTTAAACACATTTCGTATTGCAGACTTAGGCTGTGCTACTGGACCCAATACATTTCTTGCAGTGCAGACCATACTAGAAGCTGTTCAACCCAAATTAGGGTCACAAAATTCCCAAACATTCCCAGAATTTCAGGTGTTCTTCAGTGATCTAGTCTCCAATGATTTCAACACTCTGTTTAAATCACTCCCACCCCAAAGCCAAAGACCCTACTTTGCAGCTGGGGTGCCTGGTTCTTTTCACGGTCCCTTGTTTCCCAAGGCTTCCCTTCATTTTGTACACTCATCTTGTGCACTCAATTGGCTTTCACAAGTGCCGAAACCGGTCGCCGAAAGAACCTCCTCTGCATGGAATGCAGGGAAGATTCTCTACAGCAGCAGAGAAGTTACAGAGGCTTATTCTTGTCAATTTGCTAATGATATGGGGTTGTTTTTGCAAGCAAGAGCAAATGAACTTGTGGGTGGAGGGCTGATGGCACTAGTTATACCAGGTCTGCCTGTTGGAATTTTGTTCTCTGAAACCAGAAGTGCTTTGGAGTTTGAACTTTTGGGATCAACCCTGATGGGCATGGCCAACATGGGATTGGTGAGCAAGGAGAAAGTGGACTGTTTCAACTTGCCTGTATATTTTCCATCACTTGAAGAGTTGAAGGCAATCATAGAGAGAAACAGAGAGTATAAGATAGAGAAAATGGAGGCAATAAGCCACCCAAAGATGAAGACTGAGCCTAAACAGTGTATTTCAGGCATAAAGGCTGTGTTTGAGGGAATCATTGGGAAACATTTTGGAAGTAATGTCACTGAGGAACTGTTTGAGCAGTGCTCCATCAAAGCCGCAAAGCCTTCAGTTCTTCTTCTGGACACAGATATGCCGACACTTCATGTGCTTCTTGTAATTCTCAAGCGCAATGGGAATGGCAATGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

357

Amino Acids

38.94

Weight (kDa)

5.64

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 370
AciI CCGC 1 cut(s) 978
AclWI GGATC 1 cut(s) 703
AcoI YGGCCR 1 cut(s) 714
AcsI RAATTY 3 cut(s) 253, 272, 648
AcuI CTGAAG 2 cut(s) 271, 972
AfaI GTAC 1 cut(s) 423
AfiI CCNNNNNNNGG 4 cut(s) 60, 242, 243, 492
AgeI ACCGGT 1 cut(s) 466
AgsI TTSAA 6 cut(s) 233, 313, 686, 757, 785, 793
AhlI ACTAGT 1 cut(s) 622
AjnI CCWGG 2 cut(s) 373, 631
AluBI AGCT 7 cut(s) 36, 68, 77, 107, 115, 227, 365
AluI AGCT 7 cut(s) 36, 68, 77, 107, 115, 227, 365
Alw21I GWGCWC 2 cut(s) 439, 968
Alw26I GTCTC 1 cut(s) 304
Alw44I GTGCAC 1 cut(s) 435
AlwI GGATC 1 cut(s) 703
AoxI GGCC 1 cut(s) 714
ApaLI GTGCAC 1 cut(s) 435
ApeKI GCWGC 3 cut(s) 77, 362, 519
ApoI RAATTY 3 cut(s) 253, 272, 648
AsiGI ACCGGT 1 cut(s) 466
Asp700I GAANNNNTTC 1 cut(s) 228
AspLEI GCGC 1 cut(s) 1050
AspS9I GGNCC 3 cut(s) 26, 188, 389
AsuHPI GGTGA 1 cut(s) 742
AvaII GGWCC 3 cut(s) 26, 188, 389
BaeGI GKGCMC 1 cut(s) 439
BalI TGGCCA 1 cut(s) 716
BanI GGYRCC 1 cut(s) 370
BarI GAAGNNNNNNTAC 2 cut(s) 497, 529
BbsI GAAGAC 1 cut(s) 869
Bbv12I GWGCWC 2 cut(s) 439, 968
BbvI GCAGC 3 cut(s) 64, 374, 531
BccI CCATC 4 cut(s) 610, 700, 784, 977
BciT130I CCWGG 2 cut(s) 375, 633
BcoDI GTCTC 1 cut(s) 304
BcuI ACTAGT 1 cut(s) 622
BfaI CTAG 3 cut(s) 221, 296, 623
BfmI CTRYAG 1 cut(s) 514
BisI GCNGC 4 cut(s) 78, 363, 520, 978
BlsI GCNGC 4 cut(s) 79, 364, 521, 979
Bme1390I CCNGG 2 cut(s) 375, 633
Bme18I GGWCC 3 cut(s) 26, 188, 389
BmgT120I GGNCC 3 cut(s) 26, 188, 389
BmiI GGNNCC 3 cut(s) 190, 372, 391
BmrFI CCNGG 2 cut(s) 375, 633
BpiI GAAGAC 1 cut(s) 869
BplI GAGNNNNNCTC 2 cut(s) 950, 982
BpuEI CTTGAG 2 cut(s) 66, 1028
BsaJI CCNNGG 1 cut(s) 402
BsaWI WCCGGW 1 cut(s) 466
Bsc4I CCNNNNNNNGG 4 cut(s) 60, 242, 243, 492
Bse118I RCCGGY 1 cut(s) 466
Bse1I ACTGG 2 cut(s) 28, 190
Bse3DI GCAATG 2 cut(s) 1057, 1069
BseBI CCWGG 2 cut(s) 375, 633
BseDI CCNNGG 1 cut(s) 402
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 4 cut(s) 60, 242, 243, 492
BseMI GCAATG 2 cut(s) 1057, 1069
BseMII CTCAG 3 cut(s) 99, 858, 936
BseNI ACTGG 2 cut(s) 28, 190
BseRI GAGGAG 2 cut(s) 40, 475
BseSI GKGCMC 1 cut(s) 439
BseXI GCAGC 3 cut(s) 64, 374, 531
BseYI CCCAGC 1 cut(s) 365
BsgI GTGCAG 1 cut(s) 230
Bsh1285I CGRYCG 1 cut(s) 471
BshFI GGCC 1 cut(s) 716
BshNI GGYRCC 1 cut(s) 370
BshTI ACCGGT 1 cut(s) 466
BsiEI CGRYCG 1 cut(s) 471
BsiHKAI GWGCWC 2 cut(s) 439, 968
BsiSI CCGG 1 cut(s) 467
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 4 cut(s) 60, 242, 243, 492
BsmAI GTCTC 1 cut(s) 304
BsmFI GGGAC 1 cut(s) 375
BsmI GAATGC 1 cut(s) 502
BsnI GGCC 1 cut(s) 716
Bsp1286I GDGCHC 2 cut(s) 439, 968
Bsp1407I TGTACA 1 cut(s) 421
Bsp143I GATC 2 cut(s) 292, 695
BspACI CCGC 1 cut(s) 978
BspANI GGCC 1 cut(s) 716
BspCNI CTCAG 3 cut(s) 100, 859, 937
BspLI GGNNCC 3 cut(s) 190, 372, 391
BspPI GGATC 1 cut(s) 703
BspT107I GGYRCC 1 cut(s) 370
BsrDI GCAATG 2 cut(s) 1057, 1069
BsrFI RCCGGY 1 cut(s) 466
BsrGI TGTACA 1 cut(s) 421
BsrI ACTGG 2 cut(s) 28, 190
BssAI RCCGGY 1 cut(s) 466
BssECI CCNNGG 1 cut(s) 402
BssMI GATC 2 cut(s) 292, 695
BssT1I CCWWGG 1 cut(s) 402
Bst2UI CCWGG 2 cut(s) 375, 633
Bst4CI ACNGT 4 cut(s) 389, 752, 879, 954
Bst6I CTCTTC 1 cut(s) 780
BstAPI GCANNNNNTGC 1 cut(s) 497
BstAUI TGTACA 1 cut(s) 421
BstC8I GCNNGC 1 cut(s) 582
BstDEI CTNAG 4 cut(s) 108, 172, 867, 945
BstENI CCTNNNNNAGG 1 cut(s) 58
BstF5I GGATG 1 cut(s) 10
BstHHI GCGC 1 cut(s) 1050
BstKTI GATC 2 cut(s) 295, 698
BstMAI GTCTC 1 cut(s) 304
BstMBI GATC 2 cut(s) 292, 695
BstMCI CGRYCG 1 cut(s) 471
BstMWI GCNNNNNNNGC 2 cut(s) 74, 497
BstNI CCWGG 2 cut(s) 375, 633
BstSCI CCNGG 2 cut(s) 373, 631
BstSFI CTRYAG 1 cut(s) 514
BstSLI GKGCMC 1 cut(s) 439
BstV1I GCAGC 3 cut(s) 64, 374, 531
BstV2I GAAGAC 1 cut(s) 869
BsuRI GGCC 1 cut(s) 716
BtsCI GGATG 1 cut(s) 10
BtsI GCAGTG 3 cut(s) 15, 213, 968
BtsIMutI CAGTG 6 cut(s) 15, 213, 295, 884, 942, 968
Cac8I GCNNGC 1 cut(s) 582
CfoI GCGC 1 cut(s) 1050
Cfr10I RCCGGY 1 cut(s) 466
Cfr13I GGNCC 3 cut(s) 26, 188, 389
CsiI ACCWGGT 1 cut(s) 631
Csp6I GTAC 1 cut(s) 422
CspAI ACCGGT 1 cut(s) 466
CviAII CATG 4 cut(s) 492, 712, 721, 1025
CviQI GTAC 1 cut(s) 422
DdeI CTNAG 4 cut(s) 108, 172, 867, 945
DpnI GATC 2 cut(s) 294, 697
DpnII GATC 2 cut(s) 292, 695
DraI TTTAAA 2 cut(s) 150, 325
EaeI YGGCCR 1 cut(s) 714
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
Eco130I CCWWGG 1 cut(s) 402
Eco47I GGWCC 3 cut(s) 26, 188, 389
Eco57I CTGAAG 2 cut(s) 271, 972
EcoNI CCTNNNNNAGG 1 cut(s) 58
EcoRII CCWGG 2 cut(s) 373, 631
EcoT14I CCWWGG 1 cut(s) 402
ErhI CCWWGG 1 cut(s) 402
FaeI CATG 4 cut(s) 495, 715, 724, 1028
FaqI GGGAC 1 cut(s) 375
FatI CATG 4 cut(s) 491, 711, 720, 1024
Fnu4HI GCNGC 4 cut(s) 78, 363, 520, 978
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 4 cut(s) 78, 363, 520, 978
FspBI CTAG 3 cut(s) 221, 296, 623
GlaI GCGC 1 cut(s) 1049
GluI GCNGC 4 cut(s) 78, 363, 520, 978
GsaI CCCAGC 1 cut(s) 369
HaeIII GGCC 1 cut(s) 716
HapII CCGG 1 cut(s) 467
HhaI GCGC 1 cut(s) 1050
Hin1II CATG 4 cut(s) 495, 715, 724, 1028
Hin6I GCGC 1 cut(s) 1048
HinP1I GCGC 1 cut(s) 1048
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 3 cut(s) 143, 508, 912
HpaII CCGG 1 cut(s) 467
HphI GGTGA 1 cut(s) 742
Hpy166II GTNNAC 3 cut(s) 424, 437, 748
Hpy188I TCNGA 3 cut(s) 60, 142, 661
Hpy188III TCNNGA 2 cut(s) 83, 1001
Hpy8I GTNNAC 3 cut(s) 424, 437, 748
HpyAV CCTTC 4 cut(s) 11, 422, 787, 996
HpyCH4III ACNGT 4 cut(s) 389, 752, 879, 954
HpyCH4V TGCA 9 cut(s) 8, 167, 206, 211, 362, 437, 491, 500, 580
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 497
HpyF3I CTNAG 4 cut(s) 108, 172, 867, 945
Hsp92II CATG 4 cut(s) 495, 715, 724, 1028
HspAI GCGC 1 cut(s) 1048
Kzo9I GATC 2 cut(s) 292, 695
LmnI GCTCC 2 cut(s) 65, 971
Lsp1109I GCAGC 3 cut(s) 64, 374, 531
MabI ACCWGGT 1 cut(s) 631
MaeI CTAG 3 cut(s) 221, 296, 623
MaeIII GTNAC 3 cut(s) 246, 529, 940
MalI GATC 2 cut(s) 294, 697
MboI GATC 2 cut(s) 292, 695
MboII GAAGA 6 cut(s) 277, 517, 797, 874, 986, 989
MfeI CAATTG 1 cut(s) 442
MhlI GDGCHC 2 cut(s) 439, 968
MlsI TGGCCA 1 cut(s) 716
MluCI AATT 9 cut(s) 87, 132, 239, 253, 272, 442, 551, 648, 1038
MluNI TGGCCA 1 cut(s) 716
MmeI TCCRAC 1 cut(s) 625
Mox20I TGGCCA 1 cut(s) 716
MroXI GAANNNNTTC 1 cut(s) 228
MscI TGGCCA 1 cut(s) 716
MseI TTAA 2 cut(s) 149, 324
MslI CAYNNNNRTG 1 cut(s) 1010
Msp20I TGGCCA 1 cut(s) 716
MspA1I CMGCKG 1 cut(s) 365
MspI CCGG 1 cut(s) 467
MspR9I CCNGG 2 cut(s) 375, 633
MunI CAATTG 1 cut(s) 442
Mva1269I GAATGC 1 cut(s) 502
MvaI CCWGG 2 cut(s) 375, 633
MwoI GCNNNNNNNGC 2 cut(s) 74, 497
NdeII GATC 2 cut(s) 292, 695
NlaIII CATG 4 cut(s) 495, 715, 724, 1028
NlaIV GGNNCC 3 cut(s) 190, 372, 391
NmuCI GTSAC 2 cut(s) 246, 940
PctI GAATGC 1 cut(s) 502
PdmI GAANNNNTTC 1 cut(s) 228
PfeI GAWTC 3 cut(s) 143, 508, 912
PinAI ACCGGT 1 cut(s) 466
PkrI GCNGC 4 cut(s) 79, 364, 521, 979
Psp6I CCWGG 2 cut(s) 373, 631
PspFI CCCAGC 1 cut(s) 365
PspGI CCWGG 2 cut(s) 373, 631
PspN4I GGNNCC 3 cut(s) 190, 372, 391
PspPI GGNCC 3 cut(s) 26, 188, 389
PvuII CAGCTG 1 cut(s) 365
RsaI GTAC 1 cut(s) 423
RsaNI GTAC 1 cut(s) 422
RseI CAYNNNNRTG 1 cut(s) 1010
SaqAI TTAA 2 cut(s) 149, 324
SatI GCNGC 4 cut(s) 78, 363, 520, 978
Sau3AI GATC 2 cut(s) 292, 695
Sau96I GGNCC 3 cut(s) 26, 188, 389
ScrFI CCNGG 2 cut(s) 375, 633
SduI GDGCHC 2 cut(s) 439, 968
SexAI ACCWGGT 1 cut(s) 631
SfcI CTRYAG 1 cut(s) 514
SinI GGWCC 3 cut(s) 26, 188, 389
SmiMI CAYNNNNRTG 1 cut(s) 1010
SmlI CTYRAG 2 cut(s) 81, 1043
SmoI CTYRAG 2 cut(s) 81, 1043
SpeI ACTAGT 1 cut(s) 622
Sse9I AATT 9 cut(s) 87, 132, 239, 253, 272, 442, 551, 648, 1038
SsiI CCGC 1 cut(s) 978
SspMI CTAG 3 cut(s) 221, 296, 623
StyD4I CCNGG 2 cut(s) 373, 631
StyI CCWWGG 1 cut(s) 402
TaaI ACNGT 4 cut(s) 389, 752, 879, 954
TasI AATT 9 cut(s) 87, 132, 239, 253, 272, 442, 551, 648, 1038
TatI WGTACW 1 cut(s) 421
TauI GCSGC 1 cut(s) 980
TfiI GAWTC 3 cut(s) 143, 508, 912
Tru1I TTAA 2 cut(s) 149, 324
Tru9I TTAA 2 cut(s) 149, 324
TscAI CASTG 6 cut(s) 15, 213, 295, 884, 949, 968
TseFI GTSAC 2 cut(s) 246, 940
TseI GCWGC 3 cut(s) 77, 362, 519
Tsp45I GTSAC 2 cut(s) 246, 940
TspDTI ATGAA 5 cut(s) 30, 404, 609, 875, 1013
TspRI CASTG 6 cut(s) 15, 213, 295, 884, 949, 968
VneI GTGCAC 1 cut(s) 435
VpaK11BI GGWCC 3 cut(s) 26, 188, 389
XagI CCTNNNNNAGG 1 cut(s) 58
XapI RAATTY 3 cut(s) 253, 272, 648
XcmI CCANNNNNNNNNTGG 2 cut(s) 673, 724
XmnI GAANNNNTTC 1 cut(s) 228
XspI CTAG 3 cut(s) 221, 296, 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.