Prupe.1G327900_v2.0.a1

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
31177520 .. 31179066
1547 bp
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UTR
Exon/CDS
Intron
Prupe.1G327900.1_v2.0.a1.CDS.4

Sequence Viewer

Length: 339 bp
ATGCCCCCTGCTTCTCCCATCCCCGTCGACACCAACTCCGTTTCAAAAAGGCTTCAGAAGGAGTTGATGTCTCTGATGTCTTCAGTCCTTCTTCCAGTTGTGATGACTCTTATAGCAACACGACCACAAGATAGTGAATTTCTAAAGATTTTAGCTAAATTTTGCTATCCTAAGTGGGCTTTAGAAGCATTTGTGATTGCAAATGCTGAAAGCAATCTGCTGATGGAGGAGTCTAACTTTGTAAATCCGAGAACTGAAATGGAAGTGTTCGCTCATGCTGCGAATTACAAAGAGGCTAGCCGGAAGACCACCAACGAAGAGGATCAAAACTTTTGGTGA

Protein Analysis

113

Amino Acids

12.74

Weight (kDa)

5.13

Isoelectric Point (pI)

54.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 27
AclWI GGATC 1 cut(s) 330
AcsI RAATTY 2 cut(s) 137, 158
AcuI CTGAAG 2 cut(s) 38, 66
AgsI TTSAA 1 cut(s) 45
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 75
AlwI GGATC 1 cut(s) 330
ApeKI GCWGC 1 cut(s) 278
ApoI RAATTY 2 cut(s) 137, 158
AsuNHI GCTAGC 1 cut(s) 296
BbsI GAAGAC 2 cut(s) 72, 311
BbvI GCAGC 1 cut(s) 265
BccI CCATC 2 cut(s) 26, 217
BcoDI GTCTC 1 cut(s) 75
BfaI CTAG 1 cut(s) 297
BisI GCNGC 1 cut(s) 279
BlsI GCNGC 1 cut(s) 280
BmtI GCTAGC 1 cut(s) 300
BpiI GAAGAC 2 cut(s) 72, 311
BsaXI ACNNNNNCTCC 4 cut(s) 20, 50, 53, 83
Bse1I ACTGG 1 cut(s) 95
BseGI GGATG 1 cut(s) 18
BseNI ACTGG 1 cut(s) 95
BseRI GAGGAG 1 cut(s) 242
BseXI GCAGC 1 cut(s) 265
BsiSI CCGG 1 cut(s) 301
BsmAI GTCTC 1 cut(s) 75
Bsp143I GATC 1 cut(s) 322
BspOI GCTAGC 1 cut(s) 300
BspPI GGATC 1 cut(s) 330
BsrI ACTGG 1 cut(s) 95
BssMI GATC 1 cut(s) 322
Bst6I CTCTTC 1 cut(s) 312
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 1 cut(s) 171
BstF5I GGATG 1 cut(s) 18
BstKTI GATC 1 cut(s) 325
BstMAI GTCTC 1 cut(s) 75
BstMBI GATC 1 cut(s) 322
BstMWI GCNNNNNNNGC 2 cut(s) 185, 278
BstV1I GCAGC 1 cut(s) 265
BstV2I GAAGAC 2 cut(s) 72, 311
BtsCI GGATG 1 cut(s) 18
Cac8I GCNNGC 1 cut(s) 298
CviAII CATG 1 cut(s) 275
CviJI RGCY 5 cut(s) 52, 155, 179, 296, 300
CviKI_1 RGCY 5 cut(s) 52, 155, 179, 296, 300
DdeI CTNAG 1 cut(s) 171
DpnI GATC 1 cut(s) 324
DpnII GATC 1 cut(s) 322
Eam1104I CTCTTC 1 cut(s) 312
EarI CTCTTC 1 cut(s) 312
Eco57I CTGAAG 2 cut(s) 38, 66
FaeI CATG 1 cut(s) 278
FaiI YATR 2 cut(s) 113, 276
FatI CATG 1 cut(s) 274
FblI GTMKAC 1 cut(s) 27
Fnu4HI GCNGC 1 cut(s) 279
FokI GGATG 1 cut(s) 5
Fsp4HI GCNGC 1 cut(s) 279
FspBI CTAG 1 cut(s) 297
GluI GCNGC 1 cut(s) 279
HapII CCGG 1 cut(s) 301
Hin1II CATG 1 cut(s) 278
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HinfI GANTC 2 cut(s) 106, 230
HpaII CCGG 1 cut(s) 301
Hpy166II GTNNAC 1 cut(s) 28
Hpy188I TCNGA 3 cut(s) 57, 75, 249
Hpy8I GTNNAC 1 cut(s) 28
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 2 cut(s) 52, 98
HpyCH4V TGCA 1 cut(s) 200
HpyF10VI GCNNNNNNNGC 2 cut(s) 185, 278
HpyF3I CTNAG 1 cut(s) 171
Hsp92II CATG 1 cut(s) 278
Kzo9I GATC 1 cut(s) 322
LpnPI CCDG 3 cut(s) 21, 108, 314
Lsp1109I GCAGC 1 cut(s) 265
MaeI CTAG 1 cut(s) 297
MalI GATC 1 cut(s) 324
MboI GATC 1 cut(s) 322
MboII GAAGA 4 cut(s) 72, 83, 316, 329
MluCI AATT 3 cut(s) 137, 158, 283
MlyI GAGTC 2 cut(s) 100, 239
MnlI CCTC 3 cut(s) 220, 286, 313
MspI CCGG 1 cut(s) 301
MwoI GCNNNNNNNGC 2 cut(s) 185, 278
NdeII GATC 1 cut(s) 322
NheI GCTAGC 1 cut(s) 296
NlaIII CATG 1 cut(s) 278
PkrI GCNGC 1 cut(s) 280
PleI GAGTC 2 cut(s) 100, 238
PpsI GAGTC 2 cut(s) 100, 238
SalI GTCGAC 1 cut(s) 26
SatI GCNGC 1 cut(s) 279
Sau3AI GATC 1 cut(s) 322
SchI GAGTC 2 cut(s) 100, 239
SetI ASST 1 cut(s) 157
SgeI CNNG 9 cut(s) 20, 35, 107, 132, 140, 261, 287, 309, 313
Sse9I AATT 3 cut(s) 137, 158, 283
SspMI CTAG 1 cut(s) 297
TaqI TCGA 1 cut(s) 27
TasI AATT 3 cut(s) 137, 158, 283
TseI GCWGC 1 cut(s) 278
TspGWI ACGGA 1 cut(s) 28
XapI RAATTY 2 cut(s) 137, 158
XmiI GTMKAC 1 cut(s) 27
XspI CTAG 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.