Prupe.1G382500_v2.0.a1

EG45-like domain containing

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
34399676 .. 34400763
1088 bp
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UTR
Exon/CDS
Intron
Prupe.1G382500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 381 bp
ATGCTAGGACTCGAACCCAGGACCTTGTCTGAAGGAGTAAATACTCCAAACCACTACACTAGTGGGTCCTTTGCGAGAGGGTGTCTTATATATTATACAGTTATACTTGTGGCATTTGTATTGTTGTTGCCATTAAAGATGAACACATGTTGGAGATCAGAATCTCCATGGCTACAATCATCCCTGATTTTCTTGAATGTTTTGTTGAATTTTAGGTTTAGAGTTTGCGTTATTTATTTATTTATGCAACACTACATGAAAAAGGGATTAATTTTATTTTATTTCTGGTATGTGATATCTAGTAGAATTGTACAAGGAGAACGAAGGGGCGTTCGGTTTCAAGTGAATCGGGAGGGTCAAACGAGAGAAAAAGATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.89

Weight (kDa)

9.81

Isoelectric Point (pI)

53.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 208
AcuI CTGAAG 1 cut(s) 51
AfaI GTAC 1 cut(s) 312
AflIII ACRYGT 1 cut(s) 146
AgsI TTSAA 3 cut(s) 196, 208, 341
AhlI ACTAGT 1 cut(s) 59
AjnI CCWGG 1 cut(s) 17
ApoI RAATTY 1 cut(s) 208
AseI ATTAAT 1 cut(s) 269
AspS9I GGNCC 2 cut(s) 21, 66
AvaII GGWCC 2 cut(s) 21, 66
BciT130I CCWGG 1 cut(s) 19
BcuI ACTAGT 1 cut(s) 59
BfaI CTAG 3 cut(s) 5, 60, 300
Bme1390I CCNGG 1 cut(s) 19
Bme18I GGWCC 2 cut(s) 21, 66
BmgT120I GGNCC 2 cut(s) 21, 66
BmiI GGNNCC 1 cut(s) 67
BmrFI CCNGG 1 cut(s) 19
BsaBI GATNNNNATC 1 cut(s) 160
BsaJI CCNNGG 2 cut(s) 17, 167
Bse8I GATNNNNATC 1 cut(s) 160
BseBI CCWGG 1 cut(s) 19
BseDI CCNNGG 2 cut(s) 17, 167
BseGI GGATG 1 cut(s) 179
BseJI GATNNNNATC 1 cut(s) 160
Bsp1407I TGTACA 1 cut(s) 310
Bsp143I GATC 1 cut(s) 155
Bsp19I CCATGG 1 cut(s) 167
BspLI GGNNCC 1 cut(s) 67
BsrGI TGTACA 1 cut(s) 310
BssECI CCNNGG 2 cut(s) 17, 167
BssMI GATC 1 cut(s) 155
BssT1I CCWWGG 1 cut(s) 167
Bst2UI CCWGG 1 cut(s) 19
Bst4CI ACNGT 1 cut(s) 100
BstAUI TGTACA 1 cut(s) 310
BstDSI CCRYGG 1 cut(s) 167
BstF5I GGATG 1 cut(s) 179
BstKTI GATC 1 cut(s) 158
BstMBI GATC 1 cut(s) 155
BstNI CCWGG 1 cut(s) 19
BstNSI RCATGY 1 cut(s) 150
BstSCI CCNGG 1 cut(s) 17
BtgI CCRYGG 1 cut(s) 167
BtsCI GGATG 1 cut(s) 179
Cfr13I GGNCC 2 cut(s) 21, 66
Csp6I GTAC 1 cut(s) 311
CviAII CATG 3 cut(s) 147, 168, 256
CviJI RGCY 1 cut(s) 172
CviKI_1 RGCY 1 cut(s) 172
CviQI GTAC 1 cut(s) 311
DpnI GATC 1 cut(s) 157
DpnII GATC 1 cut(s) 155
Eco130I CCWWGG 1 cut(s) 167
Eco32I GATATC 1 cut(s) 297
Eco47I GGWCC 2 cut(s) 21, 66
Eco57I CTGAAG 1 cut(s) 51
EcoO109I RGGNCCY 2 cut(s) 21, 66
EcoRII CCWGG 1 cut(s) 17
EcoRV GATATC 1 cut(s) 297
EcoT14I CCWWGG 1 cut(s) 167
ErhI CCWWGG 1 cut(s) 167
FaeI CATG 3 cut(s) 150, 171, 259
FaiI YATR 9 cut(s) 89, 91, 96, 104, 148, 169, 245, 257, 291
FatI CATG 3 cut(s) 146, 167, 255
FokI GGATG 1 cut(s) 166
FspBI CTAG 3 cut(s) 5, 60, 300
Hin1II CATG 3 cut(s) 150, 171, 259
HinfI GANTC 3 cut(s) 9, 161, 346
Hpy188I TCNGA 2 cut(s) 31, 160
Hpy188III TCNNGA 2 cut(s) 193, 350
HpyAV CCTTC 2 cut(s) 26, 318
HpyCH4III ACNGT 1 cut(s) 100
HpyCH4V TGCA 1 cut(s) 247
Hsp92II CATG 3 cut(s) 150, 171, 259
Kzo9I GATC 1 cut(s) 155
LpnPI CCDG 4 cut(s) 4, 31, 197, 271
MaeI CTAG 3 cut(s) 5, 60, 300
MalI GATC 1 cut(s) 157
MboI GATC 1 cut(s) 155
MluCI AATT 3 cut(s) 208, 270, 306
MlyI GAGTC 1 cut(s) 3
MmeI TCCRAC 1 cut(s) 131
MnlI CCTC 2 cut(s) 71, 346
MseI TTAA 2 cut(s) 134, 269
MspR9I CCNGG 1 cut(s) 19
MvaI CCWGG 1 cut(s) 19
NcoI CCATGG 1 cut(s) 167
NdeII GATC 1 cut(s) 155
NlaIII CATG 3 cut(s) 150, 171, 259
NlaIV GGNNCC 1 cut(s) 67
NspI RCATGY 1 cut(s) 150
PciI ACATGT 1 cut(s) 146
PfeI GAWTC 2 cut(s) 161, 346
PflFI GACNNNGTC 1 cut(s) 25
PleI GAGTC 1 cut(s) 3
PpsI GAGTC 1 cut(s) 3
PpuMI RGGWCCY 2 cut(s) 21, 66
PscI ACATGT 1 cut(s) 146
PshBI ATTAAT 1 cut(s) 269
Psp5II RGGWCCY 2 cut(s) 21, 66
Psp6I CCWGG 1 cut(s) 17
PspGI CCWGG 1 cut(s) 17
PspN4I GGNNCC 1 cut(s) 67
PspPI GGNCC 2 cut(s) 21, 66
PspPPI RGGWCCY 2 cut(s) 21, 66
PsyI GACNNNGTC 1 cut(s) 25
RsaI GTAC 1 cut(s) 312
RsaNI GTAC 1 cut(s) 311
SaqAI TTAA 2 cut(s) 134, 269
Sau3AI GATC 1 cut(s) 155
Sau96I GGNCC 2 cut(s) 21, 66
SchI GAGTC 1 cut(s) 3
ScrFI CCNGG 1 cut(s) 19
SetI ASST 2 cut(s) 26, 218
SinI GGWCC 2 cut(s) 21, 66
SpeI ACTAGT 1 cut(s) 59
Sse9I AATT 3 cut(s) 208, 270, 306
SspMI CTAG 3 cut(s) 5, 60, 300
StyD4I CCNGG 1 cut(s) 17
StyI CCWWGG 1 cut(s) 167
TaaI ACNGT 1 cut(s) 100
TaqI TCGA 1 cut(s) 12
TasI AATT 3 cut(s) 208, 270, 306
TatI WGTACW 1 cut(s) 310
TfiI GAWTC 2 cut(s) 161, 346
Tru1I TTAA 2 cut(s) 134, 269
Tru9I TTAA 2 cut(s) 134, 269
TspDTI ATGAA 2 cut(s) 155, 272
Tth111I GACNNNGTC 1 cut(s) 25
VpaK11BI GGWCC 2 cut(s) 21, 66
VspI ATTAAT 1 cut(s) 269
XapI RAATTY 1 cut(s) 208
XceI RCATGY 1 cut(s) 150
XcmI CCANNNNNNNNNTGG 1 cut(s) 59
XspI CTAG 3 cut(s) 5, 60, 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.