Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

35845465 .. 35847721

Gene Structure 2257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G410000.1_v2.0.a1.CDS.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGCGAAACACGATCTTATCTGTGTATCAGCCATCACACCTAGCCAGCCTTGTGCCCACCATGCAGTCATACATTGAATCTGCAACTCAAAAACTTGATGACTGCTCCAAAGAAGAAGAAGAAGTTACCTTTTCCAACATCTCCCTCAGATTGGCCACTGATGTGATAGGACAAGCTGCCTTTGGTGTCAACTTTGGCCTTTCTAAACCACAATCCATCACTGATTCAATCAACAAGCAGATTGGTGGCCAAGACATTAACATTGATGAAGTCTCAGACTTTATAAACCAACACATATATTCCACAACACAGCTTAAGCTGGACTTTTCTGGTTCCTTATCAATCATACTGGGACTACTTGTTCCCATACTCCAGGCGCCATTTTGGCAGATTTTGAAGAGAATCCCTGGCACTATGGACAGGAAAATTGAACGTAACAACCAGAAATTGACTAGCCGGCTTGATCAGATTGTTGAAAAGAGAATGAAAGACAGTGGCGGCCGAGGTTCAAAGAATTTCTTGTCGCTCATACTGAATGCAAGAGAGTCAGAGACAGTTTCAAAGAATTTCTTCACCCCAGACTACATCAGTGCACTTACTTATGAGCATCTCCTTGCTGGGTCGGCCACCACATCATTTACATTGTCTTCTGTTGTTTACTTGGTTGCTGCCCACCCAGAAGTTGAGAAAAAGTTGCTGGCAGAGATTGATGGATTTGGTCCACCTGCTCAGATGCCAACTGCTCATGATCTTCAACACAAATTTCCTTATATGGATCAGGTTATCAAAGAGGCAATGAGGTTTTACATGGTTTCCCCATTAGTTGCGAGAGAAACATCTAGACAAGTCGAAATAGGAGGTTATCTTCTACCGAAGGGGACATGGGTGTGGTTAGCGCTTGGAGTTTTAGCAAAAGATCCAAAGAACTTCCCAGAGCCACACAAGTTTAAGCCAGAGAGGTTTGATCCAAGCTGCAAAGAAGAAAAACAAAGGCATCCTTATGCTTTTATACCCTTTGGCCTTGGACCTCGATCATGCATTGGTCAGAAATTTTCCCTGCAAGAAATAAAGCTCTCGCTGATTCATTTATACCGGAAATATGTATTCCGGCACACTCCCAATATGGAGATACCTCTGGAACTTGAGTTTGGCATTGTTCTAAAGTTCAAGTATGGTATCAAGCTTAGAGTCATAAAGCGCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0006629 GO:0006720 GO:0006721 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009914 GO:0009926 GO:0009934 GO:0009962 GO:0009963 GO:0009987 GO:0010016 GO:0010223 GO:0010346 GO:0010817 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0019222 GO:0022603 GO:0032501 GO:0032502 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0046148 GO:0048367 GO:0048509 GO:0048518 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901576 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

402

Amino Acids

45.46

Weight (kDa)

9.06

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	284
AarI	CACCTGC	1 cut(s)	733
Acc36I	ACCTGC	1 cut(s)	733
AccB1I	GGYRCC	1 cut(s)	376
AciI	CCGC	1 cut(s)	498
AclWI	GGATC	3 cut(s)	783, 911, 959
AcoI	YGGCCR	4 cut(s)	153, 247, 499, 624
AcsI	RAATTY	4 cut(s)	514, 565, 761, 1049
AcyI	GRCGYC	1 cut(s)	377
AfeI	AGCGCT	1 cut(s)	897
AfiI	CCNNNNNNNGG	1 cut(s)	151
AflII	CTTAAG	1 cut(s)	314
AgsI	TTSAA	9 cut(s)	77, 228, 397, 431, 476, 510, 561, 755, 1168
AjnI	CCWGG	2 cut(s)	372, 406
AjuI	GAANNNNNNNTTGG	2 cut(s)	1131, 1163
AleI	CACNNNNGTG	1 cut(s)	161
AloI	GAACNNNNNNTCC	2 cut(s)	345, 377
AluBI	AGCT	6 cut(s)	176, 313, 319, 972, 1072, 1183
AluI	AGCT	6 cut(s)	176, 313, 319, 972, 1072, 1183
Alw21I	GWGCWC	1 cut(s)	595
Alw26I	GTCTC	2 cut(s)	277, 545
Alw44I	GTGCAC	1 cut(s)	591
AlwI	GGATC	3 cut(s)	783, 911, 959
Aor51HI	AGCGCT	1 cut(s)	897
AoxI	GGCC	6 cut(s)	153, 196, 247, 499, 624, 1018
ApaLI	GTGCAC	1 cut(s)	591
ApeKI	GCWGC	3 cut(s)	176, 668, 972
ApoI	RAATTY	4 cut(s)	514, 565, 761, 1049
Asp700I	GAANNNNTTC	1 cut(s)	569
AspLEI	GCGC	3 cut(s)	379, 898, 1200
AspS9I	GGNCC	2 cut(s)	719, 1025
AsuHPI	GGTGA	1 cut(s)	565
AvaII	GGWCC	2 cut(s)	719, 1025
BaeGI	GKGCMC	2 cut(s)	57, 595
BalI	TGGCCA	2 cut(s)	155, 249
BanI	GGYRCC	1 cut(s)	376
BbsI	GAAGAC	1 cut(s)	639
Bbv12I	GWGCWC	1 cut(s)	595
BbvI	GCAGC	3 cut(s)	163, 655, 959
BccI	CCATC	3 cut(s)	40, 224, 704
BciT130I	CCWGG	2 cut(s)	374, 408
BclI	TGATCA	1 cut(s)	463
BcoDI	GTCTC	2 cut(s)	277, 545
BfaI	CTAG	3 cut(s)	41, 453, 840
BfoI	RGCGCY	2 cut(s)	380, 899
BfrI	CTTAAG	1 cut(s)	314
BfuAI	ACCTGC	1 cut(s)	733
BglI	GCCNNNNNGGC	1 cut(s)	385
BisI	GCNGC	4 cut(s)	177, 499, 669, 973
BlsI	GCNGC	4 cut(s)	178, 500, 670, 974
Bme1390I	CCNGG	2 cut(s)	374, 408
Bme18I	GGWCC	2 cut(s)	719, 1025
BmgT120I	GGNCC	2 cut(s)	719, 1025
BmiI	GGNNCC	2 cut(s)	334, 378
BmrFI	CCNGG	2 cut(s)	374, 408
BmrI	ACTGGG	1 cut(s)	359
BmsI	GCATC	3 cut(s)	616, 723, 1003
BmuI	ACTGGG	1 cut(s)	359
BpiI	GAAGAC	1 cut(s)	639
BpmI	CTGGAG	1 cut(s)	356
BpuEI	CTTGAG	1 cut(s)	1163
BsaHI	GRCGYC	1 cut(s)	377
BsaJI	CCNNGG	3 cut(s)	406, 502, 1021
BsaWI	WCCGGW	1 cut(s)	1092
Bsc4I	CCNNNNNNNGG	1 cut(s)	151
Bse118I	RCCGGY	1 cut(s)	456
Bse1I	ACTGG	1 cut(s)	354
Bse3DI	GCAATG	1 cut(s)	801
BseBI	CCWGG	2 cut(s)	374, 408
BseDI	CCNNGG	3 cut(s)	406, 502, 1021
BseGI	GGATG	1 cut(s)	994
BseLI	CCNNNNNNNGG	1 cut(s)	151
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	3 cut(s)	160, 288, 743
BseNI	ACTGG	1 cut(s)	354
BseSI	GKGCMC	2 cut(s)	57, 595
BseX3I	CGGCCG	1 cut(s)	499
BseXI	GCAGC	3 cut(s)	163, 655, 959
BseYI	CCCAGC	1 cut(s)	617
Bsh1285I	CGRYCG	1 cut(s)	502
BshFI	GGCC	6 cut(s)	155, 198, 249, 501, 626, 1020
BshNI	GGYRCC	1 cut(s)	376
BsiEI	CGRYCG	1 cut(s)	502
BsiHKAI	GWGCWC	1 cut(s)	595
BsiSI	CCGG	3 cut(s)	457, 1093, 1108
BslFI	GGGAC	2 cut(s)	366, 892
BslI	CCNNNNNNNGG	1 cut(s)	151
BsmAI	GTCTC	2 cut(s)	277, 545
BsmFI	GGGAC	2 cut(s)	366, 892
BsmI	GAATGC	1 cut(s)	541
BsnI	GGCC	6 cut(s)	155, 198, 249, 501, 626, 1020
Bsp1286I	GDGCHC	2 cut(s)	57, 595
Bsp143I	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
BspACI	CCGC	1 cut(s)	498
BspANI	GGCC	6 cut(s)	155, 198, 249, 501, 626, 1020
BspCNI	CTCAG	3 cut(s)	159, 287, 742
BspHI	TCATGA	1 cut(s)	745
BspLI	GGNNCC	2 cut(s)	334, 378
BspMI	ACCTGC	1 cut(s)	733
BspPI	GGATC	3 cut(s)	783, 911, 959
BspT107I	GGYRCC	1 cut(s)	376
BspTI	CTTAAG	1 cut(s)	314
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	1 cut(s)	456
BsrI	ACTGG	1 cut(s)	354
BssAI	RCCGGY	1 cut(s)	456
BssECI	CCNNGG	3 cut(s)	406, 502, 1021
BssMI	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
BssNI	GRCGYC	1 cut(s)	377
BssT1I	CCWWGG	1 cut(s)	1021
Bst2UI	CCWGG	2 cut(s)	374, 408
Bst4CI	ACNGT	2 cut(s)	494, 556
Bst6I	CTCTTC	1 cut(s)	392
BstACI	GRCGYC	1 cut(s)	377
BstAFI	CTTAAG	1 cut(s)	314
BstC8I	GCNNGC	3 cut(s)	46, 458, 699
BstDEI	CTNAG	4 cut(s)	146, 274, 729, 1184
BstF5I	GGATG	1 cut(s)	994
BstH2I	RGCGCY	2 cut(s)	380, 899
BstHHI	GCGC	3 cut(s)	379, 898, 1200
BstKTI	GATC	7 cut(s)	15, 466, 751, 778, 919, 967, 1034
BstMAI	GTCTC	2 cut(s)	277, 545
BstMBI	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
BstMCI	CGRYCG	1 cut(s)	502
BstMWI	GCNNNNNNNGC	3 cut(s)	61, 385, 623
BstNI	CCWGG	2 cut(s)	374, 408
BstSCI	CCNGG	2 cut(s)	372, 406
BstSLI	GKGCMC	2 cut(s)	57, 595
BstV1I	GCAGC	3 cut(s)	163, 655, 959
BstV2I	GAAGAC	1 cut(s)	639
BstX2I	RGATCY	1 cut(s)	916
BstYI	RGATCY	1 cut(s)	916
BstZI	CGGCCG	1 cut(s)	499
BsuRI	GGCC	6 cut(s)	155, 198, 249, 501, 626, 1020
BtsCI	GGATG	1 cut(s)	994
BtsIMutI	CAGTG	4 cut(s)	156, 219, 499, 595
BveI	ACCTGC	1 cut(s)	733
Cac8I	GCNNGC	3 cut(s)	46, 458, 699
CciI	TCATGA	1 cut(s)	745
CfoI	GCGC	3 cut(s)	379, 898, 1200
Cfr10I	RCCGGY	1 cut(s)	456
Cfr13I	GGNCC	2 cut(s)	719, 1025
CviAII	CATG	6 cut(s)	61, 746, 808, 882, 1035, 1203
DdeI	CTNAG	4 cut(s)	146, 274, 729, 1184
DinI	GGCGCC	1 cut(s)	378
DpnI	GATC	7 cut(s)	14, 465, 750, 777, 918, 966, 1033
DpnII	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
EaeI	YGGCCR	4 cut(s)	153, 247, 499, 624
EagI	CGGCCG	1 cut(s)	499
Eam1104I	CTCTTC	1 cut(s)	392
EarI	CTCTTC	1 cut(s)	392
EclXI	CGGCCG	1 cut(s)	499
Eco130I	CCWWGG	1 cut(s)	1021
Eco47I	GGWCC	2 cut(s)	719, 1025
Eco47III	AGCGCT	1 cut(s)	897
Eco52I	CGGCCG	1 cut(s)	499
EcoRII	CCWGG	2 cut(s)	372, 406
EcoT14I	CCWWGG	1 cut(s)	1021
EcoT22I	ATGCAT	1 cut(s)	1040
EgeI	GGCGCC	1 cut(s)	378
EheI	GGCGCC	1 cut(s)	378
ErhI	CCWWGG	1 cut(s)	1021
FaeI	CATG	6 cut(s)	64, 749, 811, 885, 1038, 1206
FalI	AAGNNNNNCTT	8 cut(s)	308, 340, 503, 535, 554, 586, 982, 1014
FaqI	GGGAC	2 cut(s)	366, 892
FatI	CATG	6 cut(s)	60, 745, 807, 881, 1034, 1202
FbaI	TGATCA	1 cut(s)	463
Fnu4HI	GCNGC	4 cut(s)	177, 499, 669, 973
FokI	GGATG	1 cut(s)	981
Fsp4HI	GCNGC	4 cut(s)	177, 499, 669, 973
FspBI	CTAG	3 cut(s)	41, 453, 840
GlaI	GCGC	3 cut(s)	378, 897, 1199
GluI	GCNGC	4 cut(s)	177, 499, 669, 973
GsaI	CCCAGC	1 cut(s)	621
GsuI	CTGGAG	1 cut(s)	356
HaeII	RGCGCY	2 cut(s)	380, 899
HaeIII	GGCC	6 cut(s)	155, 198, 249, 501, 626, 1020
HapII	CCGG	3 cut(s)	457, 1093, 1108
HhaI	GCGC	3 cut(s)	379, 898, 1200
Hin1I	GRCGYC	1 cut(s)	377
Hin1II	CATG	6 cut(s)	64, 749, 811, 885, 1038, 1206
Hin6I	GCGC	3 cut(s)	377, 896, 1198
HinP1I	GCGC	3 cut(s)	377, 896, 1198
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HindIII	AAGCTT	1 cut(s)	1181
HinfI	GANTC	6 cut(s)	77, 224, 402, 545, 1081, 1188
HpaII	CCGG	3 cut(s)	457, 1093, 1108
HphI	GGTGA	1 cut(s)	565
Hpy166II	GTNNAC	4 cut(s)	190, 593, 658, 722
Hpy188I	TCNGA	6 cut(s)	149, 277, 468, 550, 732, 1047
Hpy188III	TCNNGA	3 cut(s)	746, 840, 1136
Hpy8I	GTNNAC	4 cut(s)	190, 593, 658, 722
HpyAV	CCTTC	1 cut(s)	868
HpyCH4III	ACNGT	2 cut(s)	494, 556
HpyCH4IV	ACGT	1 cut(s)	433
HpyCH4V	TGCA	7 cut(s)	64, 83, 539, 593, 975, 1038, 1060
HpyF10VI	GCNNNNNNNGC	3 cut(s)	61, 385, 623
HpyF3I	CTNAG	4 cut(s)	146, 274, 729, 1184
HpySE526I	ACGT	1 cut(s)	433
Hsp92I	GRCGYC	1 cut(s)	377
Hsp92II	CATG	6 cut(s)	64, 749, 811, 885, 1038, 1206
HspAI	GCGC	3 cut(s)	377, 896, 1198
KasI	GGCGCC	1 cut(s)	376
KroI	GCCGGC	1 cut(s)	456
KroNI	GCCGGC	1 cut(s)	458
Ksp22I	TGATCA	1 cut(s)	463
Kzo9I	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
LmnI	GCTCC	1 cut(s)	110
Lsp1109I	GCAGC	3 cut(s)	163, 655, 959
LweI	GCATC	3 cut(s)	616, 723, 1003
MaeI	CTAG	3 cut(s)	41, 453, 840
MaeII	ACGT	1 cut(s)	433
MaeIII	GTNAC	2 cut(s)	124, 434
MalI	GATC	7 cut(s)	14, 465, 750, 777, 918, 966, 1033
MboI	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
MboII	GAAGA	9 cut(s)	125, 128, 131, 409, 562, 639, 743, 857, 992
MflI	RGATCY	1 cut(s)	916
MhlI	GDGCHC	2 cut(s)	57, 595
MlsI	TGGCCA	2 cut(s)	155, 249
MluCI	AATT	6 cut(s)	426, 446, 514, 565, 761, 1049
MluNI	TGGCCA	2 cut(s)	155, 249
Mly113I	GGCGCC	1 cut(s)	377
MlyI	GAGTC	2 cut(s)	554, 1197
MmeI	TCCRAC	1 cut(s)	159
MnlI	CCTC	8 cut(s)	155, 497, 784, 792, 851, 951, 1038, 1143
Mox20I	TGGCCA	2 cut(s)	155, 249
Mph1103I	ATGCAT	1 cut(s)	1040
MroNI	GCCGGC	1 cut(s)	456
MroXI	GAANNNNTTC	1 cut(s)	569
MscI	TGGCCA	2 cut(s)	155, 249
MseI	TTAA	3 cut(s)	258, 315, 948
MslI	CAYNNNNRTG	3 cut(s)	161, 886, 999
Msp20I	TGGCCA	2 cut(s)	155, 249
MspCI	CTTAAG	1 cut(s)	314
MspI	CCGG	3 cut(s)	457, 1093, 1108
MspR9I	CCNGG	2 cut(s)	374, 408
Mva1269I	GAATGC	1 cut(s)	541
MvaI	CCWGG	2 cut(s)	374, 408
MwoI	GCNNNNNNNGC	3 cut(s)	61, 385, 623
NaeI	GCCGGC	1 cut(s)	458
NarI	GGCGCC	1 cut(s)	377
NdeII	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
NgoMIV	GCCGGC	1 cut(s)	456
NlaIII	CATG	6 cut(s)	64, 749, 811, 885, 1038, 1206
NlaIV	GGNNCC	2 cut(s)	334, 378
NmeAIII	GCCGAG	1 cut(s)	527
NsiI	ATGCAT	1 cut(s)	1040
OliI	CACNNNNGTG	1 cut(s)	161
PagI	TCATGA	1 cut(s)	745
PaqCI	CACCTGC	1 cut(s)	733
PctI	GAATGC	1 cut(s)	541
PdiI	GCCGGC	1 cut(s)	458
PdmI	GAANNNNTTC	1 cut(s)	569
PfeI	GAWTC	4 cut(s)	77, 224, 402, 1081
PkrI	GCNGC	4 cut(s)	178, 500, 670, 974
PleI	GAGTC	2 cut(s)	553, 1196
PluTI	GGCGCC	1 cut(s)	380
PpsI	GAGTC	2 cut(s)	553, 1196
PsiI	TTATAA	1 cut(s)	284
Psp6I	CCWGG	2 cut(s)	372, 406
PspFI	CCCAGC	1 cut(s)	617
PspGI	CCWGG	2 cut(s)	372, 406
PspN4I	GGNNCC	2 cut(s)	334, 378
PspPI	GGNCC	2 cut(s)	719, 1025
PsuI	RGATCY	1 cut(s)	916
RseI	CAYNNNNRTG	3 cut(s)	161, 886, 999
SaqAI	TTAA	3 cut(s)	258, 315, 948
SatI	GCNGC	4 cut(s)	177, 499, 669, 973
Sau3AI	GATC	7 cut(s)	12, 463, 748, 775, 916, 964, 1031
Sau96I	GGNCC	2 cut(s)	719, 1025
SchI	GAGTC	2 cut(s)	554, 1197
ScrFI	CCNGG	2 cut(s)	374, 408
SduI	GDGCHC	2 cut(s)	57, 595
SfaNI	GCATC	3 cut(s)	616, 723, 1003
SfoI	GGCGCC	1 cut(s)	378
SinI	GGWCC	2 cut(s)	719, 1025
SmiMI	CAYNNNNRTG	3 cut(s)	161, 886, 999
SmlI	CTYRAG	2 cut(s)	314, 1142
SmoI	CTYRAG	2 cut(s)	314, 1142
Sse9I	AATT	6 cut(s)	426, 446, 514, 565, 761, 1049
SsiI	CCGC	1 cut(s)	498
SspDI	GGCGCC	1 cut(s)	376
SspMI	CTAG	3 cut(s)	41, 453, 840
StyD4I	CCNGG	2 cut(s)	372, 406
StyI	CCWWGG	1 cut(s)	1021
TaaI	ACNGT	2 cut(s)	494, 556
TaiI	ACGT	1 cut(s)	436
TaqI	TCGA	2 cut(s)	849, 1030
TasI	AATT	6 cut(s)	426, 446, 514, 565, 761, 1049
TauI	GCSGC	1 cut(s)	501
TfiI	GAWTC	4 cut(s)	77, 224, 402, 1081
Tru1I	TTAA	3 cut(s)	258, 315, 948
Tru9I	TTAA	3 cut(s)	258, 315, 948
TscAI	CASTG	4 cut(s)	163, 226, 499, 595
TseI	GCWGC	3 cut(s)	176, 668, 972
TspDTI	ATGAA	3 cut(s)	282, 500, 1073
TspRI	CASTG	4 cut(s)	163, 226, 499, 595
Vha464I	CTTAAG	1 cut(s)	314
VneI	GTGCAC	1 cut(s)	591
VpaK11BI	GGWCC	2 cut(s)	719, 1025
XapI	RAATTY	4 cut(s)	514, 565, 761, 1049
XbaI	TCTAGA	1 cut(s)	839
XmnI	GAANNNNTTC	1 cut(s)	569
XspI	CTAG	3 cut(s)	41, 453, 840
Zsp2I	ATGCAT	1 cut(s)	1040

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.