Prupe.1G428500_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
36804998 .. 36807252
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G428500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 786 bp
ATGCTTGCCGGAAAACACTTCCACTACAACTACACAACTGTCGCTATGACGCAACTTCCTCCGCATTATGATTGGAAAGTTCGTTTGCTACTGAATCAAATAATGAAGAGTAGTTGTGCAAAGAACATGACAAAGATTGAGCTCAAGACCAAGTTCATGGAGCTTTCGTTTAATGTGATGACGATGATGGTTGTCGGGAAACGATACCGTGGTGAAGATGTTGGAGATGCTGAAGAGGCCAAGAACTTGCGGGAGGTTATTAGGGACGCTTGGATTGATTTAGGTGTGGAGAAGAAGATGGCAGGGTTGATGGCAAAGTTGGACAAATTCTTGCAGGGCTTAGTTAACGAGGGTCGTGTAATTTTGTCATCAACGAATTGTTCATCTGATGAAAAAGGGGTTAAGAAGTTGATGATTGATAACTTATTGTCAATGCAAGAGACACAGCCCCAAATATTGCTGGTAGCTGGTACTGATACGACATCAACTACCCTAGAATGGGCAATGGCGTTGTTGGTAAACCATCCAGAGGTAATGGAGAAGACACAGCGCCTGTACCCACCTGTCCCACTTCTAGTGCCCCATGAAGCTTCTGAGGATTGTGTGGTTGGAGGATTTGATGTGCCACGTCATACAATGTTGGTGATCAATTCGTGGGCCATCCACAGGAACCCTGAGGTGTGGGAGGACCCTACAGAGTTTAGGCCAGAGAAGTTTGAAGAATGGAGTGGTGAGGGCTCTGAAGGGTATAAGCTGCGCGTGATTGACCCAAAAAAAATTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00905 ko00943 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 map00140 map00905 map00943 map01100 map01110 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

262

Amino Acids

29.81

Weight (kDa)

6.2

Isoelectric Point (pI)

32.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 759
AciI CCGC 2 cut(s) 62, 250
AcsI RAATTY 1 cut(s) 326
AcuI CTGAAG 2 cut(s) 252, 762
AfaI GTAC 2 cut(s) 472, 557
AfiI CCNNNNNNNGG 4 cut(s) 498, 499, 529, 666
AgsI TTSAA 1 cut(s) 719
AjiI CACGTC 1 cut(s) 629
AluBI AGCT 5 cut(s) 142, 163, 467, 590, 754
AluI AGCT 5 cut(s) 142, 163, 467, 590, 754
Alw21I GWGCWC 1 cut(s) 144
Alw26I GTCTC 1 cut(s) 434
AlwNI CAGNNNCTG 1 cut(s) 553
AoxI GGCC 3 cut(s) 237, 657, 704
ApeKI GCWGC 1 cut(s) 754
ApoI RAATTY 1 cut(s) 326
AspLEI GCGC 2 cut(s) 552, 759
AspS9I GGNCC 2 cut(s) 657, 688
AsuHPI GGTGA 3 cut(s) 224, 655, 743
AvaII GGWCC 1 cut(s) 688
AxyI CCTNAGG 1 cut(s) 675
BaeGI GKGCMC 1 cut(s) 582
BaeI ACNNNNGTAYC 2 cut(s) 196, 229
BanII GRGCYC 2 cut(s) 144, 740
BbsI GAAGAC 1 cut(s) 548
Bbv12I GWGCWC 1 cut(s) 144
BbvI GCAGC 1 cut(s) 741
BccI CCATC 5 cut(s) 181, 292, 304, 531, 668
BclI TGATCA 1 cut(s) 645
BcoDI GTCTC 1 cut(s) 434
BfaI CTAG 2 cut(s) 494, 575
BfmI CTRYAG 1 cut(s) 693
BfoI RGCGCY 1 cut(s) 553
BisI GCNGC 1 cut(s) 755
BlsI GCNGC 1 cut(s) 756
Bme18I GGWCC 1 cut(s) 688
BmgBI CACGTC 1 cut(s) 629
BmgT120I GGNCC 2 cut(s) 657, 688
BmiI GGNNCC 2 cut(s) 671, 690
BmsI GCATC 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 548
BpuEI CTTGAG 1 cut(s) 128
BsaJI CCNNGG 1 cut(s) 208
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 4 cut(s) 498, 499, 529, 666
Bse21I CCTNAGG 1 cut(s) 675
Bse3DI GCAATG 1 cut(s) 510
BseDI CCNNGG 1 cut(s) 208
BseGI GGATG 2 cut(s) 523, 660
BseLI CCNNNNNNNGG 4 cut(s) 498, 499, 529, 666
BseMI GCAATG 1 cut(s) 510
BseMII CTCAG 2 cut(s) 585, 666
BseSI GKGCMC 1 cut(s) 582
BseXI GCAGC 1 cut(s) 741
Bsh1236I CGCG 1 cut(s) 759
BshFI GGCC 3 cut(s) 239, 659, 706
BsiHKAI GWGCWC 1 cut(s) 144
BsiSI CCGG 1 cut(s) 9
BslFI GGGAC 2 cut(s) 278, 551
BslI CCNNNNNNNGG 4 cut(s) 498, 499, 529, 666
BsmAI GTCTC 1 cut(s) 434
BsmFI GGGAC 2 cut(s) 278, 551
BsnI GGCC 3 cut(s) 239, 659, 706
Bsp1286I GDGCHC 3 cut(s) 144, 582, 740
Bsp143I GATC 1 cut(s) 645
BspACI CCGC 2 cut(s) 62, 250
BspANI GGCC 3 cut(s) 239, 659, 706
BspCNI CTCAG 2 cut(s) 586, 667
BspFNI CGCG 1 cut(s) 759
BspLI GGNNCC 2 cut(s) 671, 690
BsrDI GCAATG 1 cut(s) 510
BssECI CCNNGG 1 cut(s) 208
BssMI GATC 1 cut(s) 645
Bst4CI ACNGT 2 cut(s) 40, 209
Bst6I CTCTTC 2 cut(s) 101, 228
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 3 cut(s) 340, 594, 675
BstDSI CCRYGG 1 cut(s) 208
BstF5I GGATG 2 cut(s) 523, 660
BstFNI CGCG 1 cut(s) 759
BstH2I RGCGCY 1 cut(s) 553
BstHHI GCGC 2 cut(s) 552, 759
BstKTI GATC 1 cut(s) 648
BstMAI GTCTC 1 cut(s) 434
BstMBI GATC 1 cut(s) 645
BstMWI GCNNNNNNNGC 1 cut(s) 236
BstSFI CTRYAG 1 cut(s) 693
BstSLI GKGCMC 1 cut(s) 582
BstUI CGCG 1 cut(s) 759
BstV1I GCAGC 1 cut(s) 741
BstV2I GAAGAC 1 cut(s) 548
BstXI CCANNNNNNTGG 1 cut(s) 157
Bsu36I CCTNAGG 1 cut(s) 675
BsuRI GGCC 3 cut(s) 239, 659, 706
BtgI CCRYGG 1 cut(s) 208
BtrI CACGTC 1 cut(s) 629
BtsCI GGATG 2 cut(s) 523, 660
Cac8I GCNNGC 1 cut(s) 6
CaiI CAGNNNCTG 1 cut(s) 553
CfoI GCGC 2 cut(s) 552, 759
Cfr13I GGNCC 2 cut(s) 657, 688
CseI GACGC 2 cut(s) 58, 275
Csp6I GTAC 2 cut(s) 471, 556
CviAII CATG 3 cut(s) 127, 157, 584
CviQI GTAC 2 cut(s) 471, 556
DdeI CTNAG 3 cut(s) 340, 594, 675
DpnI GATC 1 cut(s) 647
DpnII GATC 1 cut(s) 645
Eam1104I CTCTTC 2 cut(s) 101, 228
EarI CTCTTC 2 cut(s) 101, 228
Ecl136II GAGCTC 1 cut(s) 142
Eco24I GRGCYC 2 cut(s) 144, 740
Eco47I GGWCC 1 cut(s) 688
Eco53kI GAGCTC 1 cut(s) 142
Eco57I CTGAAG 2 cut(s) 252, 762
Eco81I CCTNAGG 1 cut(s) 675
EcoICRI GAGCTC 1 cut(s) 142
EcoO109I RGGNCCY 1 cut(s) 688
EcoT38I GRGCYC 2 cut(s) 144, 740
FaeI CATG 3 cut(s) 130, 160, 587
FaiI YATR 7 cut(s) 47, 69, 128, 158, 585, 633, 750
FaqI GGGAC 2 cut(s) 278, 551
FatI CATG 3 cut(s) 126, 156, 583
FauI CCCGC 1 cut(s) 243
FbaI TGATCA 1 cut(s) 645
Fnu4HI GCNGC 1 cut(s) 755
FokI GGATG 2 cut(s) 510, 647
FriOI GRGCYC 2 cut(s) 144, 740
Fsp4HI GCNGC 1 cut(s) 755
FspBI CTAG 2 cut(s) 494, 575
GlaI GCGC 2 cut(s) 551, 758
GluI GCNGC 1 cut(s) 755
HaeII RGCGCY 1 cut(s) 553
HaeIII GGCC 3 cut(s) 239, 659, 706
HapII CCGG 1 cut(s) 9
HgaI GACGC 2 cut(s) 58, 275
HhaI GCGC 2 cut(s) 552, 759
Hin1II CATG 3 cut(s) 130, 160, 587
Hin6I GCGC 2 cut(s) 550, 757
HinP1I GCGC 2 cut(s) 550, 757
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 588
HinfI GANTC 1 cut(s) 94
HpaI GTTAAC 1 cut(s) 346
HpaII CCGG 1 cut(s) 9
HphI GGTGA 3 cut(s) 224, 655, 743
Hpy166II GTNNAC 2 cut(s) 346, 520
Hpy188I TCNGA 3 cut(s) 388, 595, 742
Hpy188III TCNNGA 3 cut(s) 145, 196, 527
Hpy8I GTNNAC 2 cut(s) 346, 520
HpyAV CCTTC 1 cut(s) 737
HpyCH4III ACNGT 2 cut(s) 40, 209
HpyCH4IV ACGT 1 cut(s) 628
HpyCH4V TGCA 3 cut(s) 119, 334, 436
HpyF10VI GCNNNNNNNGC 1 cut(s) 236
HpyF3I CTNAG 3 cut(s) 340, 594, 675
HpySE526I ACGT 1 cut(s) 628
Hsp92II CATG 3 cut(s) 130, 160, 587
HspAI GCGC 2 cut(s) 550, 757
Ksp22I TGATCA 1 cut(s) 645
KspAI GTTAAC 1 cut(s) 346
Kzo9I GATC 1 cut(s) 645
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 1 cut(s) 741
LweI GCATC 1 cut(s) 217
MaeI CTAG 2 cut(s) 494, 575
MaeII ACGT 1 cut(s) 628
MalI GATC 1 cut(s) 647
MboI GATC 1 cut(s) 645
MboII GAAGA 7 cut(s) 118, 227, 245, 304, 307, 553, 731
MhlI GDGCHC 3 cut(s) 144, 582, 740
MluCI AATT 5 cut(s) 326, 360, 376, 649, 777
MmeI TCCRAC 3 cut(s) 202, 300, 589
MseI TTAA 4 cut(s) 171, 345, 402, 780
MspI CCGG 1 cut(s) 9
MvnI CGCG 1 cut(s) 759
MwoI GCNNNNNNNGC 1 cut(s) 236
NdeII GATC 1 cut(s) 645
NlaIII CATG 3 cut(s) 130, 160, 587
NlaIV GGNNCC 2 cut(s) 671, 690
PfeI GAWTC 1 cut(s) 94
PkrI GCNGC 1 cut(s) 756
PpuMI RGGWCCY 1 cut(s) 688
Psp124BI GAGCTC 1 cut(s) 144
Psp5II RGGWCCY 1 cut(s) 688
PspN4I GGNNCC 2 cut(s) 671, 690
PspPI GGNCC 2 cut(s) 657, 688
PspPPI RGGWCCY 1 cut(s) 688
PstNI CAGNNNCTG 1 cut(s) 553
RsaI GTAC 2 cut(s) 472, 557
RsaNI GTAC 2 cut(s) 471, 556
SacI GAGCTC 1 cut(s) 144
SaqAI TTAA 4 cut(s) 171, 345, 402, 780
SatI GCNGC 1 cut(s) 755
Sau3AI GATC 1 cut(s) 645
Sau96I GGNCC 2 cut(s) 657, 688
SduI GDGCHC 3 cut(s) 144, 582, 740
SfaNI GCATC 1 cut(s) 217
SfcI CTRYAG 1 cut(s) 693
SinI GGWCC 1 cut(s) 688
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 5 cut(s) 326, 360, 376, 649, 777
SsiI CCGC 2 cut(s) 62, 250
SspI AATATT 1 cut(s) 456
SspMI CTAG 2 cut(s) 494, 575
SstI GAGCTC 1 cut(s) 144
TaaI ACNGT 2 cut(s) 40, 209
TaiI ACGT 1 cut(s) 631
TasI AATT 5 cut(s) 326, 360, 376, 649, 777
TfiI GAWTC 1 cut(s) 94
Tru1I TTAA 4 cut(s) 171, 345, 402, 780
Tru9I TTAA 4 cut(s) 171, 345, 402, 780
TseI GCWGC 1 cut(s) 754
TspDTI ATGAA 5 cut(s) 119, 145, 372, 405, 600
VpaK11BI GGWCC 1 cut(s) 688
XapI RAATTY 1 cut(s) 326
XspI CTAG 2 cut(s) 494, 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.